RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 KCNA2P16389 499 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 ENOSF1Q7L5Y1 443 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 CDKL3Q8IVW4 592 aaPredicted RBP12.42□□□□□ -0.42
SHPRH-211ENST00000629427 ZBED8Q8IZ13 594 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 CDC42BPBQ9Y5S2 1711 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 KRT14P02533 472 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 C6orf222P0C671 652 aaPredicted RBP12.42□□□□□ -0.42
SHPRH-211ENST00000629427 PRR29P0C7W0 189 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 GFAPP14136 432 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 TYK2P29597 1187 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 COBLL1Q53SF7 1204 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 GLYCTKQ8IVS8 523 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 B4GALNT2Q8NHY0 566 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 RNF103-CHMP3A0A140T963 221 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 LDHDQ86WU2 507 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 TBC1D19Q8N5T2 526 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 ASAP3Q8TDY4 903 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 MTIF3Q9H2K0 278 aaKnown RBP12.42□□□□□ -0.42
SHPRH-211ENST00000629427 BFARQ9NZS9 450 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 PCDHB7Q9Y5E2 793 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 NPHP3-ACAD11A0A0J9YXS1 232 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 AKT1P31749 480 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 EIF3EP60228 445 aaKnown RBP12.42□□□□□ -0.42
SHPRH-211ENST00000629427 IL31Q6EBC2 164 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 PKN3Q6P5Z2 889 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 SPDYE5A6NIY4 337 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 PRKCBP05771 671 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 MAGOHP61326 146 aaKnown RBP12.42□□□□□ -0.42
SHPRH-211ENST00000629427 KRT72Q14CN4 511 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 TAF1CQ15572 869 aaPredicted RBP12.42□□□□□ -0.42
SHPRH-211ENST00000629427 SPDYE7PQ495Y7 208 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 SYCP2LQ5T4T6 812 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 EMBQ6PCB8 327 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 FOPNLQ96NB1 174 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 PLEKHA5Q9HAU0 1116 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 MAD2L2Q9UI95 211 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 HMOX2P30519 316 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 SNF8Q96H20 258 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 ADGRL3Q9HAR2 1447 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 TDP2O95551 362 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 PDGFRBP09619 1106 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 PPP3CCP48454 512 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 ARSEP51690 589 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 USP11P51784 963 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 PDAP1Q13442 181 aaKnown RBP12.41□□□□□ -0.42
SHPRH-211ENST00000629427 TOB2Q14106 344 aaPredicted RBP12.41□□□□□ -0.42
SHPRH-211ENST00000629427 LMBRD2Q68DH5 695 aaPredicted RBP12.41□□□□□ -0.42
SHPRH-211ENST00000629427 LRRC8EQ6NSJ5 796 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 CCDC137Q6PK04 289 aaKnown RBP12.41□□□□□ -0.42
SHPRH-211ENST00000629427 ZFYVE19Q96K21 471 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 FAM96AQ9H5X1 160 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.41□□□□□ -0.42
SHPRH-211ENST00000629427 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.41□□□□□ -0.42
SHPRH-211ENST00000629427 SPATA31A3Q5VYP0 1347 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 OVOS2A0A0G2JMS6 1433 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 OVOS2A0A0J9YW53 1432 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 OVOS2Q6IE36 1432 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 NR1H3Q13133 447 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 AARS2Q5JTZ9 985 aaKnown RBP12.41□□□□□ -0.42
SHPRH-211ENST00000629427 SEPT5Q99719 369 aaPredicted RBP12.41□□□□□ -0.42
SHPRH-211ENST00000629427 UNC45AQ9H3U1 944 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 H0Y3Z8 333 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 FDX1P10109 184 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 CATSPER3Q86XQ3 398 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 SP8Q8IXZ3 490 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 OSBPL9Q96SU4 736 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 ZCWPW1Q9H0M4 648 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 CYP4F11Q9HBI6 524 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 RAP1GDS1P52306 607 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 EFNA5P52803 228 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 LRRC74AQ0VAA2 488 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 IER5Q5VY09 327 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 NCAPD2Q15021 1401 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 ERVK-7P63135 1459 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 PP2D1A8MPX8 630 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 CLCN6P51797 869 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 COG2Q14746 738 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 C1orf54Q8WWF1 131 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 KLHL11Q9NVR0 708 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 SH3BP1Q9Y3L3 701 aa12.41□□□□□ -0.42
SHPRH-211ENST00000629427 TMEM132DQ14C87 1099 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 TMEM143Q96AN5 459 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 GPBP1L1Q9HC44 474 aaPredicted RBP12.4□□□□□ -0.42
SHPRH-211ENST00000629427 PREX2Q70Z35 1606 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 TRIM49P0CI25 452 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 TRIM49CP0CI26 452 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 ACOT2P49753 483 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 AP3M2P53677 418 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 OCA2Q04671 838 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 RPAINQ86UA6 219 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 MICALL2Q8IY33 904 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 RFWD2Q8NHY2 731 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 AGAP1Q9UPQ3 857 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 PDCLQ13371 301 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 SNAPC2Q13487 334 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 NFRKBQ6P4R8 1299 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 GSPT2Q8IYD1 628 aaKnown RBP12.4□□□□□ -0.42
SHPRH-211ENST00000629427 MARCH10Q8NA82 808 aaPredicted RBP12.4□□□□□ -0.42
SHPRH-211ENST00000629427 STKLD1Q8NE28 680 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 ZNF512Q96ME7 567 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms