RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 EMILIN3Q9NT22 766 aa13.91□□□□□ -0.18
SYNGAP1-208ENST00000629380 H2AFY2Q9P0M6 372 aaPredicted RBP13.91□□□□□ -0.18
SYNGAP1-208ENST00000629380 OSBPL1AQ9BXW6 950 aa13.91□□□□□ -0.18
SYNGAP1-208ENST00000629380 HEY1Q9Y5J3 304 aa13.91□□□□□ -0.18
SYNGAP1-208ENST00000629380 LRRC53A6NM62 1247 aa13.91□□□□□ -0.18
SYNGAP1-208ENST00000629380 CMTR1Q8N1G2 835 aaKnown RBP13.91□□□□□ -0.18
SYNGAP1-208ENST00000629380 WWP1Q9H0M0 922 aa13.91□□□□□ -0.18
SYNGAP1-208ENST00000629380 NDST4Q9H3R1 872 aa13.91□□□□□ -0.18
SYNGAP1-208ENST00000629380 PIDD1Q9HB75 910 aa13.91□□□□□ -0.18
SYNGAP1-208ENST00000629380 UGP2Q16851 508 aa13.91□□□□□ -0.18
SYNGAP1-208ENST00000629380 PARVBQ9HBI1 364 aa13.91□□□□□ -0.18
SYNGAP1-208ENST00000629380 RNF181Q9P0P0 153 aa13.91□□□□□ -0.18
SYNGAP1-208ENST00000629380 ZFATQ9P243 1243 aa13.91□□□□□ -0.18
SYNGAP1-208ENST00000629380 MAN1B1Q9UKM7 699 aa13.91□□□□□ -0.18
SYNGAP1-208ENST00000629380 HSPA13P48723 471 aa13.91□□□□□ -0.18
SYNGAP1-208ENST00000629380 APOA5Q6Q788 366 aa13.91□□□□□ -0.18
SYNGAP1-208ENST00000629380 MTMR6Q9Y217 621 aa13.91□□□□□ -0.18
SYNGAP1-208ENST00000629380 MEFVO15553 781 aaPredicted RBP13.91□□□□□ -0.18
SYNGAP1-208ENST00000629380 HIC1Q14526 733 aa13.91□□□□□ -0.18
SYNGAP1-208ENST00000629380 CLIC6Q96NY7 704 aa13.91□□□□□ -0.18
SYNGAP1-208ENST00000629380 GEMIN8Q9NWZ8 242 aaKnown RBP13.91□□□□□ -0.18
SYNGAP1-208ENST00000629380 TJP2Q9UDY2 1190 aa13.91□□□□□ -0.18
SYNGAP1-208ENST00000629380 KCNH4Q9UQ05 1017 aa13.91□□□□□ -0.18
SYNGAP1-208ENST00000629380 RIMS1Q86UR5 1692 aaKnown RBP13.91□□□□□ -0.18
SYNGAP1-208ENST00000629380 PDIA3P30101 505 aaKnown RBP13.91□□□□□ -0.18
SYNGAP1-208ENST00000629380 HSD17B4P51659 736 aa13.91□□□□□ -0.18
SYNGAP1-208ENST00000629380 FAM173BQ6P4H8 233 aa13.91□□□□□ -0.18
SYNGAP1-208ENST00000629380 ENOSF1Q7L5Y1 443 aa13.91□□□□□ -0.18
SYNGAP1-208ENST00000629380 YAF2Q8IY57 180 aa13.91□□□□□ -0.18
SYNGAP1-208ENST00000629380 DFFAO00273 331 aa13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 OR6B3Q8NGW1 331 aa13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 FAM161BQ96MY7 647 aa13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 TARSL2A2RTX5 802 aaKnown RBP13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 SEC31AO94979 1220 aaKnown RBP13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 NR3C1P04150 777 aa13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 DAB2IPQ5VWQ8 1189 aa13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 C2orf40Q9H1Z8 148 aa13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 NRBP1Q9UHY1 535 aa13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 CNGA2Q16280 664 aa13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 MIGA2Q7L4E1 593 aa13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 EFL1Q7Z2Z2 1120 aaKnown RBP13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 ZNF280CQ8ND82 737 aa13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 SPATA16Q9BXB7 569 aa13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 HOXC10Q9NYD6 342 aa13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 GPC3P51654 580 aa13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 BBS7Q8IWZ6 715 aa13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 ANKRD13CQ8N6S4 541 aa13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 KRT35Q92764 455 aa13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 AURKCQ9UQB9 309 aa13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 INPP5FQ9Y2H2 1132 aa13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 CLDN3O15551 220 aa13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 TBL3Q12788 808 aaKnown RBP13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 FGD2Q7Z6J4 655 aa13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 OR6P1Q8NGX9 317 aa13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 NDUFB9Q9Y6M9 179 aa13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 MFAP3LO75121 409 aa13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 ANGPT1Q15389 498 aa13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 PARP9Q8IXQ6 854 aa13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 VPS11Q9H270 941 aa13.9□□□□□ -0.18
SYNGAP1-208ENST00000629380 CLIC2O15247 247 aa13.9□□□□□ -0.19
SYNGAP1-208ENST00000629380 PALMO75781 387 aa13.9□□□□□ -0.19
SYNGAP1-208ENST00000629380 MYL3P08590 195 aa13.9□□□□□ -0.19
SYNGAP1-208ENST00000629380 PCYOX1LQ8NBM8 494 aa13.9□□□□□ -0.19
SYNGAP1-208ENST00000629380 GTF3C2Q8WUA4 911 aaPredicted RBP13.9□□□□□ -0.19
SYNGAP1-208ENST00000629380 BPIFA3Q9BQP9 254 aa13.89□□□□□ -0.19
SYNGAP1-208ENST00000629380 RRAGDQ9NQL2 400 aaPredicted RBP13.89□□□□□ -0.19
SYNGAP1-208ENST00000629380 CLASP2O75122 1294 aaKnown RBP13.89□□□□□ -0.19
SYNGAP1-208ENST00000629380 MTERF2Q49AM1 385 aa13.89□□□□□ -0.19
SYNGAP1-208ENST00000629380 SLC9A2Q9UBY0 812 aa13.89□□□□□ -0.19
SYNGAP1-208ENST00000629380 UBE3AQ05086 875 aa13.89□□□□□ -0.19
SYNGAP1-208ENST00000629380 MFSD14CQ5VZR4 134 aa13.89□□□□□ -0.19
SYNGAP1-208ENST00000629380 STXBP3O00186 592 aa13.89□□□□□ -0.19
SYNGAP1-208ENST00000629380 HMOX2P30519 316 aa13.89□□□□□ -0.19
SYNGAP1-208ENST00000629380 AP3M2P53677 418 aa13.89□□□□□ -0.19
SYNGAP1-208ENST00000629380 KRT31Q15323 416 aa13.89□□□□□ -0.19
SYNGAP1-208ENST00000629380 MAPK6Q16659 721 aa13.89□□□□□ -0.19
SYNGAP1-208ENST00000629380 CC2D1AQ6P1N0 951 aaPredicted RBP13.89□□□□□ -0.19
SYNGAP1-208ENST00000629380 TMEM270Q6UE05 265 aa13.89□□□□□ -0.19
SYNGAP1-208ENST00000629380 ZNF560Q96MR9 790 aa13.89□□□□□ -0.19
SYNGAP1-208ENST00000629380 PSMD3O43242 534 aa13.89□□□□□ -0.19
SYNGAP1-208ENST00000629380 SFNP31947 248 aa13.89□□□□□ -0.19
SYNGAP1-208ENST00000629380 GPC5P78333 572 aa13.89□□□□□ -0.19
SYNGAP1-208ENST00000629380 SEMA3FQ13275 785 aa13.89□□□□□ -0.19
SYNGAP1-208ENST00000629380 DHX34Q14147 1143 aaKnown RBP13.89□□□□□ -0.19
SYNGAP1-208ENST00000629380 SLFNL1Q499Z3 407 aa13.89□□□□□ -0.19
SYNGAP1-208ENST00000629380 BTNL9Q6UXG8 535 aa13.89□□□□□ -0.19
SYNGAP1-208ENST00000629380 FAM162AQ96A26 154 aa13.89□□□□□ -0.19
SYNGAP1-208ENST00000629380 FTOQ9C0B1 505 aaKnown RBP eCLIP13.89□□□□□ -0.19
SYNGAP1-208ENST00000629380 NMRK1Q9NWW6 199 aa13.89□□□□□ -0.19
SYNGAP1-208ENST00000629380 C6orf203Q9P0P8 240 aaPredicted RBP13.89□□□□□ -0.19
SYNGAP1-208ENST00000629380 CPSF1Q10570 1443 aaKnown RBP13.89□□□□□ -0.19
SYNGAP1-208ENST00000629380 COG1Q8WTW3 980 aa13.89□□□□□ -0.19
SYNGAP1-208ENST00000629380 FRMPD1Q5SYB0 1578 aa13.89□□□□□ -0.19
SYNGAP1-208ENST00000629380 CDK17Q00537 523 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 DPCR1Q3MIW9 517 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 ZNF568Q3ZCX4 644 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 CMTM5Q96DZ9 223 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 MTIF3Q9H2K0 278 aaKnown RBP13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 CLTCL1P53675 1640 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 PRPF3O43395 683 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms