RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 CENPPQ6IPU0 288 aa13.47□□□□□ -0.25
SYNGAP1-207ENST00000628646 GPIHBP1Q8IV16 184 aa13.47□□□□□ -0.25
SYNGAP1-207ENST00000628646 CEP112Q8N8E3 955 aa13.47□□□□□ -0.25
SYNGAP1-207ENST00000628646 NUCKS1Q9H1E3 243 aaKnown RBP13.47□□□□□ -0.25
SYNGAP1-207ENST00000628646 ZMYND8Q9ULU4 1186 aaPredicted RBP13.47□□□□□ -0.25
SYNGAP1-207ENST00000628646 PNMA6AP0CW24 399 aaPredicted RBP13.47□□□□□ -0.25
SYNGAP1-207ENST00000628646 MCM3P25205 808 aa13.47□□□□□ -0.25
SYNGAP1-207ENST00000628646 MORC4Q8TE76 937 aa13.47□□□□□ -0.25
SYNGAP1-207ENST00000628646 AFAP1L1Q8TED9 768 aa13.47□□□□□ -0.25
SYNGAP1-207ENST00000628646 ACAP3Q96P50 834 aa13.47□□□□□ -0.25
SYNGAP1-207ENST00000628646 CELF4Q9BZC1 486 aaKnown RBP13.47□□□□□ -0.25
SYNGAP1-207ENST00000628646 USP6NLQ92738 828 aa13.47□□□□□ -0.25
SYNGAP1-207ENST00000628646 ALS2CR12Q96Q35 445 aa13.47□□□□□ -0.25
SYNGAP1-207ENST00000628646 KRT5P13647 590 aa13.47□□□□□ -0.25
SYNGAP1-207ENST00000628646 KIF5AQ12840 1032 aa13.47□□□□□ -0.25
SYNGAP1-207ENST00000628646 PPP4R3CPQ6ZMV5 832 aa13.47□□□□□ -0.25
SYNGAP1-207ENST00000628646 FMNL3Q8IVF7 1028 aa13.47□□□□□ -0.25
SYNGAP1-207ENST00000628646 ANKZF1Q9H8Y5 726 aa13.47□□□□□ -0.25
SYNGAP1-207ENST00000628646 AGPAT5Q9NUQ2 364 aa13.47□□□□□ -0.25
SYNGAP1-207ENST00000628646 RBAKQ9NYW8 714 aaPredicted RBP13.47□□□□□ -0.25
SYNGAP1-207ENST00000628646 LGR5O75473 907 aa13.46□□□□□ -0.25
SYNGAP1-207ENST00000628646 TUBBP07437 444 aa13.46□□□□□ -0.25
SYNGAP1-207ENST00000628646 CCDC172P0C7W6 258 aa13.46□□□□□ -0.25
SYNGAP1-207ENST00000628646 DRP2Q13474 957 aa13.46□□□□□ -0.25
SYNGAP1-207ENST00000628646 GDF6Q6KF10 455 aaPredicted RBP13.46□□□□□ -0.25
SYNGAP1-207ENST00000628646 ZNF662Q6ZS27 426 aa13.46□□□□□ -0.25
SYNGAP1-207ENST00000628646 EP400NLQ6ZTU2 488 aa13.46□□□□□ -0.25
SYNGAP1-207ENST00000628646 ZNF720Q7Z2F6 126 aa13.46□□□□□ -0.25
SYNGAP1-207ENST00000628646 SRGAP1Q7Z6B7 1085 aa13.46□□□□□ -0.25
SYNGAP1-207ENST00000628646 C16orf70Q9BSU1 422 aa13.46□□□□□ -0.25
SYNGAP1-207ENST00000628646 TSEN34Q9BSV6 310 aaKnown RBP13.46□□□□□ -0.25
SYNGAP1-207ENST00000628646 NIFKQ9BYG3 293 aaKnown RBP13.46□□□□□ -0.25
SYNGAP1-207ENST00000628646 KLK14Q9P0G3 267 aa13.46□□□□□ -0.25
SYNGAP1-207ENST00000628646 TRIM10Q9UDY6 481 aa13.46□□□□□ -0.25
SYNGAP1-207ENST00000628646 ITGA4P13612 1032 aa13.46□□□□□ -0.25
SYNGAP1-207ENST00000628646 RTP1P59025 263 aa13.46□□□□□ -0.25
SYNGAP1-207ENST00000628646 CAPSQ13938 189 aa13.46□□□□□ -0.25
SYNGAP1-207ENST00000628646 LMBRD2Q68DH5 695 aaPredicted RBP13.46□□□□□ -0.25
SYNGAP1-207ENST00000628646 ZNF410Q86VK4 478 aa13.46□□□□□ -0.25
SYNGAP1-207ENST00000628646 URGCPQ8TCY9 931 aa13.46□□□□□ -0.25
SYNGAP1-207ENST00000628646 PCYT2Q99447 389 aa13.46□□□□□ -0.25
SYNGAP1-207ENST00000628646 GTF2IRD1Q9UHL9 959 aa13.46□□□□□ -0.25
SYNGAP1-207ENST00000628646 TRIM60Q495X7 471 aa13.46□□□□□ -0.26
SYNGAP1-207ENST00000628646 CCDC181Q5TID7 509 aa13.46□□□□□ -0.26
SYNGAP1-207ENST00000628646 SLC35F6Q8N357 371 aa13.46□□□□□ -0.26
SYNGAP1-207ENST00000628646 NME8Q8N427 588 aa13.46□□□□□ -0.26
SYNGAP1-207ENST00000628646 GLIS3Q8NEA6 775 aa13.46□□□□□ -0.26
SYNGAP1-207ENST00000628646 TUBGCP2Q9BSJ2 902 aa13.46□□□□□ -0.26
SYNGAP1-207ENST00000628646 IFIH1Q9BYX4 1025 aaKnown RBP13.46□□□□□ -0.26
SYNGAP1-207ENST00000628646 TSGA10Q9BZW7 698 aa13.46□□□□□ -0.26
SYNGAP1-207ENST00000628646 COL1A2P08123 1366 aa13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 SMIM35A0A1B0GVV1 85 aa13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 RBM47A0AV96 593 aaKnown RBP13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 RCCD1A6NED2 376 aa13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 LPXNO60711 386 aa13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 NDUFA10O95299 355 aa13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 CD52P31358 61 aa13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 PIK3CAP42336 1068 aa13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 HYIQ5T013 277 aa13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 KIAA1841Q6NSI8 718 aa13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 GLB1LQ6UWU2 654 aa13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 GPD1LQ8N335 351 aa13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 PGBD4Q96DM1 585 aa13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 HSPBP1Q9NZL4 362 aa13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 TFR2Q9UP52 801 aa13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 SEC31AO94979 1220 aaKnown RBP13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 ZFYVE27Q5T4F4 411 aa13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 CC2D1AQ6P1N0 951 aaPredicted RBP13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 KRT222Q8N1A0 295 aa13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 TMEM199Q8N511 208 aa13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 GPR161Q8N6U8 529 aaKnown RBP13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 KIF12Q96FN5 646 aa13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 KIAA1586Q9HCI6 787 aa13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 FAM207AQ9NSI2 230 aaPredicted RBP13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 NXF1Q9UBU9 619 aaKnown RBP13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 PCDHA2Q9Y5H9 948 aa13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 PDXKO00764 312 aa13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 SYN1P17600 705 aa13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 ARHGAP44Q17R89 818 aa13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 VWA3BQ502W6 1294 aa13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 RABGGTAQ92696 567 aa13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 PARD6BQ9BYG5 372 aa13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 DHX33Q9H6R0 707 aaKnown RBP13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 CDC23Q9UJX2 597 aa13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 PCDHB7Q9Y5E2 793 aa13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 KAT6AQ92794 2004 aa13.45□□□□□ -0.26
SYNGAP1-207ENST00000628646 TACC1O75410 805 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 ATF7P17544 494 aaPredicted RBP13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 CYP2C18P33260 490 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 MXI1P50539 228 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 CKAP4Q07065 602 aaKnown RBP13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 PPM1KQ8N3J5 372 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 DNAJC19Q96DA6 116 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 ERGIC2Q96RQ1 377 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 ADAM2Q99965 735 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 CFHR5Q9BXR6 569 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 SIK3Q9Y2K2 1263 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 ZNF263O14978 683 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 PAN2Q504Q3 1202 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms