RNA–Protein interactions for RNA: ENST00000628397.2

CCDC163-205, Transcript of coiled-coil domain containing 163, humanhuman

TSL 3

Gene CCDC163, Length 885 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-205ENST00000628397 SPAG1Q07617 926 aa13.31□□□□□ -0.28
CCDC163-205ENST00000628397 PPIGQ13427 754 aaKnown RBP eCLIP13.31□□□□□ -0.28
CCDC163-205ENST00000628397 KCNJ12Q14500 433 aa13.31□□□□□ -0.28
CCDC163-205ENST00000628397 ZBTB41Q5SVQ8 909 aa13.31□□□□□ -0.28
CCDC163-205ENST00000628397 UBXN11Q5T124 520 aa13.31□□□□□ -0.28
CCDC163-205ENST00000628397 CNKSR3Q6P9H4 555 aa13.31□□□□□ -0.28
CCDC163-205ENST00000628397 CBWD2Q8IUF1 395 aa13.31□□□□□ -0.28
CCDC163-205ENST00000628397 RPUSD2Q8IZ73 545 aaKnown RBP13.31□□□□□ -0.28
CCDC163-205ENST00000628397 CEP120Q8N960 986 aa13.31□□□□□ -0.28
CCDC163-205ENST00000628397 ZSWIM2Q8NEG5 633 aa13.31□□□□□ -0.28
CCDC163-205ENST00000628397 FBXL18Q96ME1 805 aa13.31□□□□□ -0.28
CCDC163-205ENST00000628397 NXF3Q9H4D5 531 aaKnown RBP13.31□□□□□ -0.28
CCDC163-205ENST00000628397 METTL14Q9HCE5 456 aaKnown RBP13.31□□□□□ -0.28
CCDC163-205ENST00000628397 C1orf112Q9NSG2 853 aa13.31□□□□□ -0.28
CCDC163-205ENST00000628397 RBAKQ9NYW8 714 aaPredicted RBP13.31□□□□□ -0.28
CCDC163-205ENST00000628397 ZMYND8Q9ULU4 1186 aaPredicted RBP13.31□□□□□ -0.28
CCDC163-205ENST00000628397 IPPQ9Y573 584 aa13.31□□□□□ -0.28
CCDC163-205ENST00000628397 PCDHB2Q9Y5E7 798 aa13.31□□□□□ -0.28
CCDC163-205ENST00000628397 PDCD11Q14690 1871 aaKnown RBP13.31□□□□□ -0.28
CCDC163-205ENST00000628397 MAPK13O15264 365 aa13.3□□□□□ -0.28
CCDC163-205ENST00000628397 FAM189A1O60320 539 aa13.3□□□□□ -0.28
CCDC163-205ENST00000628397 ADRB2P07550 413 aa13.3□□□□□ -0.28
CCDC163-205ENST00000628397 TPM2P07951 284 aa13.3□□□□□ -0.28
CCDC163-205ENST00000628397 CLTAP09496 248 aa13.3□□□□□ -0.28
CCDC163-205ENST00000628397 STAG3L1P0CL83 205 aa13.3□□□□□ -0.28
CCDC163-205ENST00000628397 EEF1GP26641 437 aaKnown RBP13.3□□□□□ -0.28
CCDC163-205ENST00000628397 TNFSF9P41273 254 aa13.3□□□□□ -0.28
CCDC163-205ENST00000628397 MTIF2P46199 727 aaKnown RBP13.3□□□□□ -0.28
CCDC163-205ENST00000628397 YARSP54577 528 aaKnown RBP13.3□□□□□ -0.28
CCDC163-205ENST00000628397 FPGSQ05932 587 aa13.3□□□□□ -0.28
CCDC163-205ENST00000628397 CDKAL1Q5VV42 579 aa13.3□□□□□ -0.28
CCDC163-205ENST00000628397 USP37Q86T82 979 aa13.3□□□□□ -0.28
CCDC163-205ENST00000628397 BRSK2Q8IWQ3 736 aa13.3□□□□□ -0.28
CCDC163-205ENST00000628397 BADQ92934 168 aa13.3□□□□□ -0.28
CCDC163-205ENST00000628397 ACAP3Q96P50 834 aa13.3□□□□□ -0.28
CCDC163-205ENST00000628397 LBHD1Q9BQE6 289 aaPredicted RBP13.3□□□□□ -0.28
CCDC163-205ENST00000628397 TRAIPQ9BWF2 469 aa13.3□□□□□ -0.28
CCDC163-205ENST00000628397 TSPYL2Q9H2G4 693 aaPredicted RBP13.3□□□□□ -0.28
CCDC163-205ENST00000628397 RPF1Q9H9Y2 349 aaKnown RBP13.3□□□□□ -0.28
CCDC163-205ENST00000628397 RGS18Q9NS28 235 aa13.3□□□□□ -0.28
CCDC163-205ENST00000628397 ARMCX3Q9UH62 379 aaPredicted RBP13.3□□□□□ -0.28
CCDC163-205ENST00000628397 CPSF3Q9UKF6 684 aaKnown RBP13.3□□□□□ -0.28
CCDC163-205ENST00000628397 HES2Q9Y543 173 aa13.3□□□□□ -0.28
CCDC163-205ENST00000628397 TRIP11Q15643 1979 aa13.29□□□□□ -0.28
CCDC163-205ENST00000628397 GOLGA6L3A6NEY3 463 aa13.29□□□□□ -0.28
CCDC163-205ENST00000628397 CXCL8P10145 99 aa13.29□□□□□ -0.28
CCDC163-205ENST00000628397 ACTN1P12814 892 aa13.29□□□□□ -0.28
CCDC163-205ENST00000628397 ITGA4P13612 1032 aa13.29□□□□□ -0.28
CCDC163-205ENST00000628397 ZNF18P17022 549 aa13.29□□□□□ -0.28
CCDC163-205ENST00000628397 PPP2R3AQ06190 1150 aa13.29□□□□□ -0.28
CCDC163-205ENST00000628397 CYP24A1Q07973 514 aa13.29□□□□□ -0.28
CCDC163-205ENST00000628397 BFSP1Q12934 665 aa13.29□□□□□ -0.28
CCDC163-205ENST00000628397 IKBKEQ14164 716 aa13.29□□□□□ -0.28
CCDC163-205ENST00000628397 TCP11X2Q5H9J9 407 aa13.29□□□□□ -0.28
CCDC163-205ENST00000628397 DCAF17Q5H9S7 520 aaPredicted RBP13.29□□□□□ -0.28
CCDC163-205ENST00000628397 TCERG1LQ5VWI1 586 aa13.29□□□□□ -0.28
CCDC163-205ENST00000628397 CRELD2Q6UXH1 353 aaPredicted RBP13.29□□□□□ -0.28
CCDC163-205ENST00000628397 SLC24A5Q71RS6 500 aa13.29□□□□□ -0.28
CCDC163-205ENST00000628397 INTS8Q75QN2 995 aaKnown RBP13.29□□□□□ -0.28
CCDC163-205ENST00000628397 FRMD5Q7Z6J6 570 aa13.29□□□□□ -0.28
CCDC163-205ENST00000628397 TMEM192Q8IY95 271 aa13.29□□□□□ -0.28
CCDC163-205ENST00000628397 RNF169Q8NCN4 708 aa13.29□□□□□ -0.28
CCDC163-205ENST00000628397 SMG8Q8ND04 991 aaKnown RBP13.29□□□□□ -0.28
CCDC163-205ENST00000628397 LINC01599Q8WXQ3 324 aa13.29□□□□□ -0.28
CCDC163-205ENST00000628397 PGBD4Q96DM1 585 aa13.29□□□□□ -0.28
CCDC163-205ENST00000628397 FAM212AQ96EL1 285 aa13.29□□□□□ -0.28
CCDC163-205ENST00000628397 HSD3B7Q9H2F3 369 aa13.29□□□□□ -0.28
CCDC163-205ENST00000628397 IL23AQ9NPF7 189 aa13.29□□□□□ -0.28
CCDC163-205ENST00000628397 TOPORSQ9NS56 1045 aaPredicted RBP13.29□□□□□ -0.28
CCDC163-205ENST00000628397 SNTG2Q9NY99 539 aa13.29□□□□□ -0.28
CCDC163-205ENST00000628397 PCDH10Q9P2E7 1040 aa13.29□□□□□ -0.28
CCDC163-205ENST00000628397 PARP2Q9UGN5 583 aa13.29□□□□□ -0.28
CCDC163-205ENST00000628397 NR2E3Q9Y5X4 410 aa13.29□□□□□ -0.28
CCDC163-205ENST00000628397 TDRD15B5MCY1 1934 aaKnown RBP13.29□□□□□ -0.28
CCDC163-205ENST00000628397 A0A0U1RQF3 1178 aa13.28□□□□□ -0.28
CCDC163-205ENST00000628397 C9IYK1 514 aa13.28□□□□□ -0.28
CCDC163-205ENST00000628397 RECQL4O94761 1208 aa13.28□□□□□ -0.28
CCDC163-205ENST00000628397 IL18RAPO95256 599 aa13.28□□□□□ -0.28
CCDC163-205ENST00000628397 ACRP10323 421 aa13.28□□□□□ -0.28
CCDC163-205ENST00000628397 ATP1A3P13637 1013 aa13.28□□□□□ -0.28
CCDC163-205ENST00000628397 PRKCSHP14314 528 aaPredicted RBP13.28□□□□□ -0.28
CCDC163-205ENST00000628397 VAMP7P51809 220 aa13.28□□□□□ -0.28
CCDC163-205ENST00000628397 MARSP56192 900 aaKnown RBP13.28□□□□□ -0.28
CCDC163-205ENST00000628397 PLCB2Q00722 1185 aa13.28□□□□□ -0.28
CCDC163-205ENST00000628397 PSMD6Q15008 389 aa13.28□□□□□ -0.28
CCDC163-205ENST00000628397 SURF1Q15526 300 aa13.28□□□□□ -0.28
CCDC163-205ENST00000628397 ENOX2Q16206 610 aaKnown RBP13.28□□□□□ -0.28
CCDC163-205ENST00000628397 TCTN1Q2MV58 587 aa13.28□□□□□ -0.28
CCDC163-205ENST00000628397 RTN4RL1Q86UN2 441 aaPredicted RBP13.28□□□□□ -0.28
CCDC163-205ENST00000628397 ECHDC2Q86YB7 292 aa13.28□□□□□ -0.28
CCDC163-205ENST00000628397 IRF2BP1Q8IU81 584 aa13.28□□□□□ -0.28
CCDC163-205ENST00000628397 CCDC127Q96BQ5 260 aa13.28□□□□□ -0.28
CCDC163-205ENST00000628397 FNBP1Q96RU3 617 aa13.28□□□□□ -0.28
CCDC163-205ENST00000628397 TAB2Q9NYJ8 693 aa13.28□□□□□ -0.28
CCDC163-205ENST00000628397 LRFN2Q9ULH4 789 aa13.28□□□□□ -0.28
CCDC163-205ENST00000628397 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.28□□□□□ -0.28
CCDC163-205ENST00000628397 ABHD14A-ACY1A0A1B0GW23 586 aa13.27□□□□□ -0.29
CCDC163-205ENST00000628397 PES1O00541 588 aaKnown RBP13.27□□□□□ -0.29
CCDC163-205ENST00000628397 EFCAB14O75071 495 aa13.27□□□□□ -0.29
CCDC163-205ENST00000628397 ZNF623O75123 536 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms