RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 VEZTQ9HBM0 779 aa20.58■□□□□ 0.88
PTBP1-220ENST00000627714 RGPD3A6NKT7 1758 aaPredicted RBP20.58■□□□□ 0.88
PTBP1-220ENST00000627714 RGPD4Q7Z3J3 1758 aa20.58■□□□□ 0.88
PTBP1-220ENST00000627714 CTNND1O60716 968 aaKnown RBP20.57■□□□□ 0.88
PTBP1-220ENST00000627714 ECEL1O95672 775 aa20.57■□□□□ 0.88
PTBP1-220ENST00000627714 APBA3O96018 575 aa20.57■□□□□ 0.88
PTBP1-220ENST00000627714 MAP3K10Q02779 954 aa20.57■□□□□ 0.88
PTBP1-220ENST00000627714 CALCOCO2Q13137 446 aa20.57■□□□□ 0.88
PTBP1-220ENST00000627714 DMP1Q13316 513 aaPredicted RBP20.57■□□□□ 0.88
PTBP1-220ENST00000627714 LACTB2Q53H82 288 aaPredicted RBP20.57■□□□□ 0.88
PTBP1-220ENST00000627714 ACAD10Q6JQN1 1059 aa20.57■□□□□ 0.88
PTBP1-220ENST00000627714 CBWD2Q8IUF1 395 aa20.57■□□□□ 0.88
PTBP1-220ENST00000627714 MTMR14Q8NCE2 650 aa20.57■□□□□ 0.88
PTBP1-220ENST00000627714 RDM1Q8NG50 284 aa20.57■□□□□ 0.88
PTBP1-220ENST00000627714 SYTL5Q8TDW5 730 aaPredicted RBP20.57■□□□□ 0.88
PTBP1-220ENST00000627714 MAIP1Q8WWC4 291 aa20.57■□□□□ 0.88
PTBP1-220ENST00000627714 ROPN1BQ9BZX4 212 aaPredicted RBP20.57■□□□□ 0.88
PTBP1-220ENST00000627714 C17orf75Q9HAS0 396 aa20.57■□□□□ 0.88
PTBP1-220ENST00000627714 ROPN1Q9HAT0 212 aaPredicted RBP20.57■□□□□ 0.88
PTBP1-220ENST00000627714 LRRC4CQ9HCJ2 640 aa20.57■□□□□ 0.88
PTBP1-220ENST00000627714 RIPK2O43353 540 aa20.57■□□□□ 0.88
PTBP1-220ENST00000627714 MAN1A1P33908 653 aa20.57■□□□□ 0.88
PTBP1-220ENST00000627714 SIX1Q15475 284 aaPredicted RBP20.57■□□□□ 0.88
PTBP1-220ENST00000627714 KCTD19Q17RG1 926 aaPredicted RBP20.57■□□□□ 0.88
PTBP1-220ENST00000627714 FAM102BQ5T8I3 360 aa20.57■□□□□ 0.88
PTBP1-220ENST00000627714 TRMT10CQ7L0Y3 403 aaKnown RBP20.57■□□□□ 0.88
PTBP1-220ENST00000627714 TMEM161BQ8NDZ6 487 aa20.57■□□□□ 0.88
PTBP1-220ENST00000627714 ZSWIM2Q8NEG5 633 aa20.57■□□□□ 0.88
PTBP1-220ENST00000627714 SEMA4DQ92854 862 aa20.57■□□□□ 0.88
PTBP1-220ENST00000627714 GLIS2Q9BZE0 524 aaPredicted RBP20.57■□□□□ 0.88
PTBP1-220ENST00000627714 SEMA4AQ9H3S1 761 aa20.57■□□□□ 0.88
PTBP1-220ENST00000627714 CCDC134Q9H6E4 229 aa20.57■□□□□ 0.88
PTBP1-220ENST00000627714 GOLGA8IPA6NC78 632 aa20.56■□□□□ 0.88
PTBP1-220ENST00000627714 GOLGA8JA6NMD2 632 aa20.56■□□□□ 0.88
PTBP1-220ENST00000627714 ATMINO43313 823 aaPredicted RBP20.56■□□□□ 0.88
PTBP1-220ENST00000627714 RARAP10276 462 aa20.56■□□□□ 0.88
PTBP1-220ENST00000627714 CHN1P15882 459 aa20.56■□□□□ 0.88
PTBP1-220ENST00000627714 CNGA1P29973 690 aa20.56■□□□□ 0.88
PTBP1-220ENST00000627714 ADSSP30520 456 aa20.56■□□□□ 0.88
PTBP1-220ENST00000627714 SPP2Q13103 211 aa20.56■□□□□ 0.88
PTBP1-220ENST00000627714 XKR9Q5GH70 373 aa20.56■□□□□ 0.88
PTBP1-220ENST00000627714 MFSD5Q6N075 450 aa20.56■□□□□ 0.88
PTBP1-220ENST00000627714 RNF207Q6ZRF8 634 aa20.56■□□□□ 0.88
PTBP1-220ENST00000627714 SYDE1Q6ZW31 735 aaPredicted RBP20.56■□□□□ 0.88
PTBP1-220ENST00000627714 TAOK1Q7L7X3 1001 aa20.56■□□□□ 0.88
PTBP1-220ENST00000627714 SPIRE2Q8WWL2 714 aa20.56■□□□□ 0.88
PTBP1-220ENST00000627714 FBXL18Q96ME1 805 aa20.56■□□□□ 0.88
PTBP1-220ENST00000627714 TMEM39BQ9GZU3 492 aa20.56■□□□□ 0.88
PTBP1-220ENST00000627714 AZI2Q9H6S1 392 aa20.56■□□□□ 0.88
PTBP1-220ENST00000627714 RAB20Q9NX57 234 aa20.56■□□□□ 0.88
PTBP1-220ENST00000627714 WHRNQ9P202 907 aa20.56■□□□□ 0.88
PTBP1-220ENST00000627714 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.56■□□□□ 0.88
PTBP1-220ENST00000627714 FAM170AA1A519 330 aa20.55■□□□□ 0.88
PTBP1-220ENST00000627714 FSCN2O14926 492 aa20.55■□□□□ 0.88
PTBP1-220ENST00000627714 ASAP2O43150 1006 aa20.55■□□□□ 0.88
PTBP1-220ENST00000627714 ZC3H11AO75152 810 aaKnown RBP eCLIP20.55■□□□□ 0.889e-7■■□□□ 14.3
PTBP1-220ENST00000627714 GHRP10912 638 aa20.55■□□□□ 0.88
PTBP1-220ENST00000627714 MIGA2Q7L4E1 593 aa20.55■□□□□ 0.88
PTBP1-220ENST00000627714 MFSD14AQ96MC6 490 aa20.55■□□□□ 0.88
PTBP1-220ENST00000627714 SELENOSQ9BQE4 189 aa20.55■□□□□ 0.88
PTBP1-220ENST00000627714 ZNF341Q9BYN7 854 aa20.55■□□□□ 0.88
PTBP1-220ENST00000627714 KDM4CQ9H3R0 1056 aa20.55■□□□□ 0.88
PTBP1-220ENST00000627714 GPRC5CQ9NQ84 441 aa20.55■□□□□ 0.88
PTBP1-220ENST00000627714 TLDC2A0PJX2 215 aa20.55■□□□□ 0.88
PTBP1-220ENST00000627714 PGM5Q15124 567 aa20.55■□□□□ 0.88
PTBP1-220ENST00000627714 UGCGQ16739 394 aa20.55■□□□□ 0.88
PTBP1-220ENST00000627714 ANKRD20A8PQ5CZ79 823 aa20.55■□□□□ 0.88
PTBP1-220ENST00000627714 TNFAIP8L3Q5GJ75 292 aa20.55■□□□□ 0.88
PTBP1-220ENST00000627714 ANKS4BQ8N8V4 417 aa20.55■□□□□ 0.88
PTBP1-220ENST00000627714 MDM1Q8TC05 714 aa20.55■□□□□ 0.88
PTBP1-220ENST00000627714 ATXN2LQ8WWM7 1075 aaKnown RBP20.55■□□□□ 0.88
PTBP1-220ENST00000627714 DDX1Q92499 740 aaKnown RBP20.55■□□□□ 0.88
PTBP1-220ENST00000627714 CCDC127Q96BQ5 260 aa20.55■□□□□ 0.88
PTBP1-220ENST00000627714 TRIM11Q96F44 468 aa20.55■□□□□ 0.88
PTBP1-220ENST00000627714 ZNF317Q96PQ6 595 aaPredicted RBP20.55■□□□□ 0.88
PTBP1-220ENST00000627714 OSBPL7Q9BZF2 842 aa20.55■□□□□ 0.88
PTBP1-220ENST00000627714 SLC38A10Q9HBR0 1119 aa20.55■□□□□ 0.88
PTBP1-220ENST00000627714 PHF20L1A8MW92 1017 aa20.54■□□□□ 0.88
PTBP1-220ENST00000627714 RASGRF2O14827 1237 aa20.54■□□□□ 0.88
PTBP1-220ENST00000627714 NPTX2P47972 431 aa20.54■□□□□ 0.88
PTBP1-220ENST00000627714 GCNT1Q02742 428 aa20.54■□□□□ 0.88
PTBP1-220ENST00000627714 PPP1R7Q15435 360 aa20.54■□□□□ 0.88
PTBP1-220ENST00000627714 PSPC1Q8WXF1 523 aaKnown RBP20.54■□□□□ 0.88
PTBP1-220ENST00000627714 CCDC114Q96M63 670 aa20.54■□□□□ 0.88
PTBP1-220ENST00000627714 NTPCRQ9BSD7 190 aaKnown RBP20.54■□□□□ 0.88
PTBP1-220ENST00000627714 ADAM7Q9H2U9 754 aa20.54■□□□□ 0.88
PTBP1-220ENST00000627714 AVENQ9NQS1 362 aaPredicted RBP20.54■□□□□ 0.88
PTBP1-220ENST00000627714 ANKRD63C9JTQ0 380 aa20.54■□□□□ 0.88
PTBP1-220ENST00000627714 MYBL1P10243 752 aa20.54■□□□□ 0.88
PTBP1-220ENST00000627714 CLEC16AQ2KHT3 1053 aa20.54■□□□□ 0.88
PTBP1-220ENST00000627714 XRRA1Q6P2D8 792 aa20.54■□□□□ 0.88
PTBP1-220ENST00000627714 CCDC197Q8NCU1 140 aa20.54■□□□□ 0.88
PTBP1-220ENST00000627714 SAAL1Q96ER3 474 aa20.54■□□□□ 0.88
PTBP1-220ENST00000627714 KMT5AQ9NQR1 393 aa20.54■□□□□ 0.88
PTBP1-220ENST00000627714 INTS9Q9NV88 658 aaKnown RBP20.54■□□□□ 0.88
PTBP1-220ENST00000627714 CHORDC1Q9UHD1 332 aaPredicted RBP20.54■□□□□ 0.88
PTBP1-220ENST00000627714 TCRBV7S2A1N4TA0A589 114 aa20.53■□□□□ 0.88
PTBP1-220ENST00000627714 DENND3A2RUS2 1198 aa20.53■□□□□ 0.88
PTBP1-220ENST00000627714 RASSF9O75901 435 aa20.53■□□□□ 0.88
PTBP1-220ENST00000627714 RAD17O75943 681 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms