RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 CLCN4P51793 760 aa11.92□□□□□ -0.5
SSBP4-215ENST00000625926 DSG1Q02413 1049 aa11.92□□□□□ -0.5
SSBP4-215ENST00000625926 MAPK7Q13164 816 aa11.92□□□□□ -0.5
SSBP4-215ENST00000625926 HSP90AA2PQ14568 343 aaPredicted RBP11.92□□□□□ -0.5
SSBP4-215ENST00000625926 USP41Q3LFD5 358 aa11.92□□□□□ -0.5
SSBP4-215ENST00000625926 RARS2Q5T160 578 aaKnown RBP11.92□□□□□ -0.5
SSBP4-215ENST00000625926 FUT10Q6P4F1 479 aa11.92□□□□□ -0.5
SSBP4-215ENST00000625926 GPR65Q8IYL9 337 aa11.92□□□□□ -0.5
SSBP4-215ENST00000625926 DAW1Q8N136 415 aa11.92□□□□□ -0.5
SSBP4-215ENST00000625926 C12orf76Q8N812 135 aaPredicted RBP11.92□□□□□ -0.5
SSBP4-215ENST00000625926 EDAQ92838 391 aa11.92□□□□□ -0.5
SSBP4-215ENST00000625926 NTPCRQ9BSD7 190 aaKnown RBP11.92□□□□□ -0.5
SSBP4-215ENST00000625926 MRPL4Q9BYD3 311 aaKnown RBP11.92□□□□□ -0.5
SSBP4-215ENST00000625926 RXFP1Q9HBX9 757 aa11.92□□□□□ -0.5
SSBP4-215ENST00000625926 CHST7Q9NS84 486 aa11.92□□□□□ -0.5
SSBP4-215ENST00000625926 KCND2Q9NZV8 630 aa11.92□□□□□ -0.5
SSBP4-215ENST00000625926 DPP7Q9UHL4 492 aa11.92□□□□□ -0.5
SSBP4-215ENST00000625926 ADAM28Q9UKQ2 775 aa11.92□□□□□ -0.5
SSBP4-215ENST00000625926 GDAQ9Y2T3 454 aa11.92□□□□□ -0.5
SSBP4-215ENST00000625926 NR2E1Q9Y466 385 aa11.92□□□□□ -0.5
SSBP4-215ENST00000625926 EVPLQ92817 2033 aa11.92□□□□□ -0.5
SSBP4-215ENST00000625926 REV3LO60673 3130 aa11.91□□□□□ -0.5
SSBP4-215ENST00000625926 NLRC5Q86WI3 1866 aa11.91□□□□□ -0.5
SSBP4-215ENST00000625926 VPS37CA5D8V6 355 aaPredicted RBP11.91□□□□□ -0.5
SSBP4-215ENST00000625926 PTGESO14684 152 aa11.91□□□□□ -0.5
SSBP4-215ENST00000625926 TEX28O15482 410 aa11.91□□□□□ -0.5
SSBP4-215ENST00000625926 PLA2G4BP0C869 781 aa11.91□□□□□ -0.5
SSBP4-215ENST00000625926 PLS3P13797 630 aa11.91□□□□□ -0.5
SSBP4-215ENST00000625926 SMTNP53814 917 aa11.91□□□□□ -0.5
SSBP4-215ENST00000625926 RAD51AP2Q09MP3 1159 aa11.91□□□□□ -0.5
SSBP4-215ENST00000625926 SF3A1Q15459 793 aaKnown RBP11.91□□□□□ -0.5
SSBP4-215ENST00000625926 ELMSAN1Q6PJG2 1045 aa11.91□□□□□ -0.5
SSBP4-215ENST00000625926 SPIRE2Q8WWL2 714 aa11.91□□□□□ -0.5
SSBP4-215ENST00000625926 RABGGTAQ92696 567 aa11.91□□□□□ -0.5
SSBP4-215ENST00000625926 CALML4Q96GE6 196 aa11.91□□□□□ -0.5
SSBP4-215ENST00000625926 ACO2Q99798 780 aaKnown RBP11.91□□□□□ -0.5
SSBP4-215ENST00000625926 TCHPQ9BT92 498 aa11.91□□□□□ -0.5
SSBP4-215ENST00000625926 GPR62Q9BZJ7 368 aa11.91□□□□□ -0.5
SSBP4-215ENST00000625926 SFXN1Q9H9B4 322 aa11.91□□□□□ -0.5
SSBP4-215ENST00000625926 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.91□□□□□ -0.5
SSBP4-215ENST00000625926 ARHGAP28Q9P2N2 729 aa11.91□□□□□ -0.5
SSBP4-215ENST00000625926 CDH22Q9UJ99 828 aa11.91□□□□□ -0.5
SSBP4-215ENST00000625926 CASTOR2A6NHX0 329 aa11.9□□□□□ -0.5
SSBP4-215ENST00000625926 SLC16A4O15374 487 aa11.9□□□□□ -0.5
SSBP4-215ENST00000625926 C1RP00736 705 aa11.9□□□□□ -0.5
SSBP4-215ENST00000625926 WEE2P0C1S8 567 aa11.9□□□□□ -0.5
SSBP4-215ENST00000625926 LONP1P36776 959 aaKnown RBP11.9□□□□□ -0.5
SSBP4-215ENST00000625926 YARSP54577 528 aaKnown RBP11.9□□□□□ -0.5
SSBP4-215ENST00000625926 SLC12A3P55017 1021 aa11.9□□□□□ -0.5
SSBP4-215ENST00000625926 CREMQ03060 361 aa11.9□□□□□ -0.5
SSBP4-215ENST00000625926 STRN3Q13033 797 aa11.9□□□□□ -0.5
SSBP4-215ENST00000625926 TMEM119Q4V9L6 283 aa11.9□□□□□ -0.5
SSBP4-215ENST00000625926 FNDC1Q4ZHG4 1894 aaPredicted RBP11.9□□□□□ -0.5
SSBP4-215ENST00000625926 KANK3Q6NY19 840 aa11.9□□□□□ -0.5
SSBP4-215ENST00000625926 TMC5Q6UXY8 1006 aa11.9□□□□□ -0.5
SSBP4-215ENST00000625926 TAS1R3Q7RTX0 852 aa11.9□□□□□ -0.5
SSBP4-215ENST00000625926 GPR149Q86SP6 731 aa11.9□□□□□ -0.5
SSBP4-215ENST00000625926 INTS4Q96HW7 963 aaKnown RBP11.9□□□□□ -0.5
SSBP4-215ENST00000625926 B3GALT6Q96L58 329 aa11.9□□□□□ -0.5
SSBP4-215ENST00000625926 PAAF1Q9BRP4 392 aa11.9□□□□□ -0.5
SSBP4-215ENST00000625926 CCDC94Q9BW85 323 aaPredicted RBP11.9□□□□□ -0.5
SSBP4-215ENST00000625926 TARS2Q9BW92 718 aaKnown RBP11.9□□□□□ -0.5
SSBP4-215ENST00000625926 CXCL16Q9H2A7 254 aa11.9□□□□□ -0.5
SSBP4-215ENST00000625926 POMKQ9H5K3 350 aa11.9□□□□□ -0.5
SSBP4-215ENST00000625926 PTPRHQ9HD43 1115 aa11.9□□□□□ -0.5
SSBP4-215ENST00000625926 TSHZ2Q9NRE2 1034 aa11.9□□□□□ -0.5
SSBP4-215ENST00000625926 TOPORSQ9NS56 1045 aaPredicted RBP11.9□□□□□ -0.5
SSBP4-215ENST00000625926 LARSQ9P2J5 1176 aaKnown RBP11.9□□□□□ -0.5
SSBP4-215ENST00000625926 SF3B1O75533 1304 aaKnown RBP eCLIP11.89□□□□□ -0.514e-6■■■■■ 89
SSBP4-215ENST00000625926 TCF20Q9UGU0 1960 aaKnown RBP11.89□□□□□ -0.51
SSBP4-215ENST00000625926 H0YCG3 227 aa11.89□□□□□ -0.51
SSBP4-215ENST00000625926 GLUD1P00367 558 aa11.89□□□□□ -0.51
SSBP4-215ENST00000625926 MCF2P10911 925 aa11.89□□□□□ -0.51
SSBP4-215ENST00000625926 SYT1P21579 422 aa11.89□□□□□ -0.51
SSBP4-215ENST00000625926 SP100P23497 879 aaPredicted RBP11.89□□□□□ -0.51
SSBP4-215ENST00000625926 GRM5P41594 1212 aa11.89□□□□□ -0.51
SSBP4-215ENST00000625926 ZXDAP98168 799 aa11.89□□□□□ -0.51
SSBP4-215ENST00000625926 ELAVL2Q12926 359 aaKnown RBP11.89□□□□□ -0.51
SSBP4-215ENST00000625926 NAB2Q15742 525 aa11.89□□□□□ -0.51
SSBP4-215ENST00000625926 ZNF568Q3ZCX4 644 aa11.89□□□□□ -0.51
SSBP4-215ENST00000625926 DCLRE1AQ6PJP8 1040 aa11.89□□□□□ -0.51
SSBP4-215ENST00000625926 C15orf39Q6ZRI6 1047 aa11.89□□□□□ -0.51
SSBP4-215ENST00000625926 TRIM67Q6ZTA4 783 aa11.89□□□□□ -0.51
SSBP4-215ENST00000625926 ZBTB33Q86T24 672 aa11.89□□□□□ -0.51
SSBP4-215ENST00000625926 RASSF8Q8NHQ8 419 aa11.89□□□□□ -0.51
SSBP4-215ENST00000625926 HDAC7Q8WUI4 952 aa11.89□□□□□ -0.51
SSBP4-215ENST00000625926 RIN2Q8WYP3 895 aaPredicted RBP11.89□□□□□ -0.51
SSBP4-215ENST00000625926 TTPALQ9BTX7 342 aa11.89□□□□□ -0.51
SSBP4-215ENST00000625926 CDT1Q9H211 546 aa11.89□□□□□ -0.51
SSBP4-215ENST00000625926 MAN1C1Q9NR34 630 aa11.89□□□□□ -0.51
SSBP4-215ENST00000625926 FNIP2Q9P278 1114 aa11.89□□□□□ -0.51
SSBP4-215ENST00000625926 CACNG4Q9UBN1 327 aa11.89□□□□□ -0.51
SSBP4-215ENST00000625926 USTQ9Y2C2 406 aa11.89□□□□□ -0.51
SSBP4-215ENST00000625926 NPHP3-ACAD11A0A0J9YXS1 232 aa11.88□□□□□ -0.51
SSBP4-215ENST00000625926 SMIM28A0A1B0GU29 152 aa11.88□□□□□ -0.51
SSBP4-215ENST00000625926 C2CD4DB7Z1M9 353 aa11.88□□□□□ -0.51
SSBP4-215ENST00000625926 TOM1L1O75674 476 aa11.88□□□□□ -0.51
SSBP4-215ENST00000625926 KIF4AO95239 1232 aa11.88□□□□□ -0.51
SSBP4-215ENST00000625926 BRD1O95696 1058 aa11.88□□□□□ -0.51
SSBP4-215ENST00000625926 PROZP22891 400 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms