RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 ZDHHC15Q96MV8 337 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.76□□□□□ -0.53
VPS8-227ENST00000625842 RNF14Q9UBS8 474 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 DBR1Q9UK59 544 aaKnown RBP11.76□□□□□ -0.53
VPS8-227ENST00000625842 PRR12Q9ULL5 1215 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 GCC2Q8IWJ2 1684 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 STK36Q9NRP7 1315 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 CYP2D7A0A087X1C5 515 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 GLTPD2A6NH11 291 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 M0QYT0 321 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 OPLAHO14841 1288 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 MTSS1O43312 755 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 ECEL1O95672 775 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 FGF19O95750 216 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 STMN1P16949 149 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 MUTP22033 750 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 CASP2P42575 452 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 NLRP11P59045 1033 aaKnown RBP11.76□□□□□ -0.53
VPS8-227ENST00000625842 C8orf34Q49A92 452 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 MAGOHBQ96A72 148 aaKnown RBP11.76□□□□□ -0.53
VPS8-227ENST00000625842 DCLK3Q9C098 648 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 UBE2OQ9C0C9 1292 aaKnown RBP11.76□□□□□ -0.53
VPS8-227ENST00000625842 FAM96AQ9H5X1 160 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 CHST12Q9NRB3 414 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 BARHL2Q9NY43 387 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 PHF20L1A8MW92 1017 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 B3GAT3O94766 335 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 TOMM70O94826 608 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 SUN1O94901 812 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 CTNNB1P35222 781 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 VPS41P49754 854 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 EMC2Q15006 297 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 INAVAQ3KP66 663 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 KRT71Q3SY84 523 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 NFKBIZQ9BYH8 718 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 NLNQ9BYT8 704 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 ANTXR1Q9H6X2 564 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 SENP2Q9HC62 589 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 TARBP1Q13395 1621 aaKnown RBP11.76□□□□□ -0.53
VPS8-227ENST00000625842 ICAM1P05362 532 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 AXLP30530 894 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 CAPZA2P47755 286 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 EFHC1Q5JVL4 640 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 NSUN4Q96CB9 384 aaKnown RBP11.75□□□□□ -0.53
VPS8-227ENST00000625842 AHCYL2Q96HN2 611 aaKnown RBP11.75□□□□□ -0.53
VPS8-227ENST00000625842 THAP9Q9H5L6 903 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 DIS3Q9Y2L1 958 aaKnown RBP11.75□□□□□ -0.53
VPS8-227ENST00000625842 SAR1BQ9Y6B6 198 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 H2AFYO75367 372 aaKnown RBP11.75□□□□□ -0.53
VPS8-227ENST00000625842 ERN1O75460 977 aaKnown RBP11.75□□□□□ -0.53
VPS8-227ENST00000625842 HMGCRP04035 888 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 PLCG1P19174 1290 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 NME3Q13232 169 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 HIST2H2ACQ16777 129 aaPredicted RBP11.75□□□□□ -0.53
VPS8-227ENST00000625842 ZNF284Q2VY69 593 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 HIST2H2AA3Q6FI13 130 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 KRT35Q92764 455 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 MTBPQ96DY7 904 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 KIFC3Q9BVG8 833 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 MRPL17Q9NRX2 175 aaKnown RBP11.75□□□□□ -0.53
VPS8-227ENST00000625842 PSD3Q9NYI0 1048 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 NAGPAQ9UK23 515 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 SHROOM2Q13796 1616 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 NPTXRO95502 500 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 ADH1AP07327 375 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 RHOXF2BP0C7M4 288 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 FAM200BP0CF97 657 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 MYL4P12829 197 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 GRK4P32298 578 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 FKBP1AP62942 108 aaKnown RBP11.75□□□□□ -0.53
VPS8-227ENST00000625842 SLC12A1Q13621 1099 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 RHOXF2Q9BQY4 288 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 SPATC1LQ9H0A9 340 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 IP6K2Q9UHH9 426 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 GAKO14976 1311 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 THP07101 528 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 ERVK-10P10266 1014 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 VAMP7P51809 220 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 NCKAP1LP55160 1127 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 PNOCQ13519 176 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 SLC20A1Q8WUM9 679 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 WDR41Q9HAD4 459 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 CALCOCO1Q9P1Z2 691 aa11.75□□□□□ -0.53
VPS8-227ENST00000625842 FRMD3A2A2Y4 597 aa11.74□□□□□ -0.53
VPS8-227ENST00000625842 MIF4GDA9UHW6 222 aaKnown RBP11.74□□□□□ -0.53
VPS8-227ENST00000625842 TLL1O43897 1013 aa11.74□□□□□ -0.53
VPS8-227ENST00000625842 IRF1P10914 325 aa11.74□□□□□ -0.53
VPS8-227ENST00000625842 RWDD2BP57060 319 aa11.74□□□□□ -0.53
VPS8-227ENST00000625842 LBRQ14739 615 aaKnown RBP11.74□□□□□ -0.53
VPS8-227ENST00000625842 NKX1-1Q15270 411 aaPredicted RBP11.74□□□□□ -0.53
VPS8-227ENST00000625842 RAB30Q15771 203 aa11.74□□□□□ -0.53
VPS8-227ENST00000625842 WDR72Q3MJ13 1102 aa11.74□□□□□ -0.53
VPS8-227ENST00000625842 B4GALNT4Q76KP1 1039 aa11.74□□□□□ -0.53
VPS8-227ENST00000625842 APBA2Q99767 749 aa11.74□□□□□ -0.53
VPS8-227ENST00000625842 NT5C1AQ9BXI3 368 aa11.74□□□□□ -0.53
VPS8-227ENST00000625842 GPR75-ASB3A0A0A6YYF3 556 aa11.74□□□□□ -0.53
VPS8-227ENST00000625842 PDE2AO00408 941 aaPredicted RBP11.74□□□□□ -0.53
VPS8-227ENST00000625842 GADD45BO75293 160 aaPredicted RBP11.74□□□□□ -0.53
VPS8-227ENST00000625842 GRK3P35626 688 aa11.74□□□□□ -0.53
VPS8-227ENST00000625842 INPP1P49441 399 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms