RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 SEMA5AQ13591 1074 aa3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 CNN3Q15417 329 aaKnown RBP3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 FAM214AQ32MH5 1076 aa3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 ANO6Q4KMQ2 910 aa3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 GAGE13Q4V321 117 aa3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 KHDC1Q4VXA5 237 aaKnown RBP3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 COBLL1Q53SF7 1204 aa3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 ZNF572Q7Z3I7 529 aaPredicted RBP3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 HEATR3Q7Z4Q2 680 aa3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 GPR135Q8IZ08 494 aa3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 FAM43AQ8N2R8 423 aa3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 SVIPQ8NHG7 77 aa3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 KLHDC4Q8TBB5 520 aa3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 STON2Q8WXE9 905 aa3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 LPPQ93052 612 aa3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 UHRF1Q96T88 793 aaPredicted RBP3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 SLC38A3Q99624 504 aa3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 PTPN18Q99952 460 aa3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 MYOCQ99972 504 aa3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 APOL5Q9BWW9 433 aa3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 C22orf23Q9BZE7 217 aa3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 MEGF9Q9H1U4 602 aa3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 SLC6A15Q9H2J7 730 aa3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 MANSC1Q9H8J5 431 aa3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 FAM204AQ9H8W3 233 aa3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 ZMAT3Q9HA38 289 aaKnown RBP3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 IL23AQ9NPF7 189 aa3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 MAN1C1Q9NR34 630 aa3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 SLC23A1Q9UHI7 598 aa3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 L1RE1Q9UN81 338 aa3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 POLHQ9Y253 713 aa3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 NR2E1Q9Y466 385 aa3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 PCDHA3Q9Y5H8 950 aa3.52□□□□□ -1.85
SCARNA4-202ENST00000625402 SLC26A4O43511 780 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 PLIN1O60240 522 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 JUNP05412 331 aaKnown RBP3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 CD1AP06126 327 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 C8AP07357 584 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 MYL3P08590 195 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 SBK3P0C264 359 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 DDCP20711 480 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 MALP21145 153 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 SLC6A4P31645 630 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 PER3P56645 1201 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 GJA9P57773 515 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 SNAPC2Q13487 334 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 RIN1Q13671 783 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 PLS1Q14651 629 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 RAB39AQ14964 217 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 SAFBQ15424 915 aaKnown RBP eCLIP3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 CSRP2Q16527 193 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 KIAA0753Q2KHM9 967 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 NT5DC1Q5TFE4 455 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 TCERG1LQ5VWI1 586 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 AFMIDQ63HM1 303 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 KRT40Q6A162 431 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 PPP4R4Q6NUP7 873 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 APOA5Q6Q788 366 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 CCDC149Q6ZUS6 474 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 SRGAP1Q7Z6B7 1085 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 TTC7BQ86TV6 843 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 PPP1R3BQ86XI6 285 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 SLC35B2Q8TB61 432 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 PARD3BQ8TEW8 1205 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 MPHOSPH6Q99547 160 aaKnown RBP3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 CHMP4AQ9BY43 222 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 SENP6Q9GZR1 1112 aaPredicted RBP3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 JADE2Q9NQC1 790 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 KMT5AQ9NQR1 393 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 LMBRD1Q9NUN5 540 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 NCDNQ9UBB6 729 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 ABCF2Q9UG63 623 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 OAZ3Q9UMX2 235 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 DUSP10Q9Y6W6 482 aa3.51□□□□□ -1.85
SCARNA4-202ENST00000625402 ANO9A1A5B4 782 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 CAPN8A6NHC0 703 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 F2RL2O00254 374 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 NRP1O14786 923 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 SLC16A6O15403 523 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 B4GALT4O60513 344 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 GASTP01350 101 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 TYRP14679 529 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 CFPP27918 469 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 PEX2P28328 305 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 SERPINB3P29508 390 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 PTPN7P35236 360 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 GJC2Q5T442 439 aaPredicted RBP3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 ANKS6Q68DC2 871 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 PPP4R3AQ6IN85 833 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 MAEAQ7L5Y9 396 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 DAAM2Q86T65 1068 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 RSPH3Q86UC2 560 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 FAM90A1Q86YD7 464 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 PLXDC1Q8IUK5 500 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 C3orf20Q8ND61 904 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 SHCBP1Q8NEM2 672 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 CASKIN2Q8WXE0 1202 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 RABGGTAQ92696 567 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 TTC17Q96AE7 1141 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 NEIL1Q96FI4 390 aaPredicted RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms