RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 SLC7A14Q8TBB6 771 aa15.58■□□□□ 0.08
SNX1-214ENST00000625244 ELSPBP1Q96BH3 223 aa15.58■□□□□ 0.08
SNX1-214ENST00000625244 NIFKQ9BYG3 293 aaKnown RBP15.58■□□□□ 0.08
SNX1-214ENST00000625244 OSBPL3Q9H4L5 887 aa15.58■□□□□ 0.08
SNX1-214ENST00000625244 BRD9Q9H8M2 597 aa15.58■□□□□ 0.08
SNX1-214ENST00000625244 MINDY3Q9H8M7 445 aa15.58■□□□□ 0.08
SNX1-214ENST00000625244 UBN1Q9NPG3 1134 aa15.58■□□□□ 0.08
SNX1-214ENST00000625244 C2orf42Q9NWW7 574 aa15.58■□□□□ 0.08
SNX1-214ENST00000625244 SEPT9Q9UHD8 586 aaPredicted RBP15.58■□□□□ 0.08
SNX1-214ENST00000625244 ADAM28Q9UKQ2 775 aa15.58■□□□□ 0.08
SNX1-214ENST00000625244 MRPS23Q9Y3D9 190 aaKnown RBP15.58■□□□□ 0.08
SNX1-214ENST00000625244 GREB1Q4ZG55 1949 aa15.58■□□□□ 0.08
SNX1-214ENST00000625244 CCDC69A6NI79 296 aa15.57■□□□□ 0.08
SNX1-214ENST00000625244 SH2B2O14492 632 aaPredicted RBP15.57■□□□□ 0.08
SNX1-214ENST00000625244 NRG2O14511 850 aaPredicted RBP15.57■□□□□ 0.08
SNX1-214ENST00000625244 ADAM12O43184 909 aa15.57■□□□□ 0.08
SNX1-214ENST00000625244 NR1I2O75469 434 aa15.57■□□□□ 0.08
SNX1-214ENST00000625244 STBD1O95210 358 aa15.57■□□□□ 0.08
SNX1-214ENST00000625244 FCARP24071 287 aa15.57■□□□□ 0.08
SNX1-214ENST00000625244 NOVA1P51513 510 aaKnown RBP15.57■□□□□ 0.08
SNX1-214ENST00000625244 PRR16Q569H4 304 aa15.57■□□□□ 0.08
SNX1-214ENST00000625244 SPEM1Q8N4L4 309 aa15.57■□□□□ 0.08
SNX1-214ENST00000625244 FANCBQ8NB91 859 aa15.57■□□□□ 0.08
SNX1-214ENST00000625244 ZCCHC14Q8WYQ9 949 aaKnown RBP15.57■□□□□ 0.08
SNX1-214ENST00000625244 EIF2AQ9BY44 585 aaKnown RBP15.57■□□□□ 0.08
SNX1-214ENST00000625244 GDE1Q9NZC3 331 aa15.57■□□□□ 0.08
SNX1-214ENST00000625244 HES2Q9Y543 173 aa15.57■□□□□ 0.08
SNX1-214ENST00000625244 IPPQ9Y573 584 aa15.57■□□□□ 0.08
SNX1-214ENST00000625244 PIAS3Q9Y6X2 628 aa15.57■□□□□ 0.08
SNX1-214ENST00000625244 WDR81Q562E7 1941 aa15.56■□□□□ 0.08
SNX1-214ENST00000625244 ADAMTS3O15072 1205 aa15.56■□□□□ 0.08
SNX1-214ENST00000625244 CHMP2AO43633 222 aa15.56■□□□□ 0.08
SNX1-214ENST00000625244 PRC1O43663 620 aa15.56■□□□□ 0.08
SNX1-214ENST00000625244 PAPSS2O95340 614 aaPredicted RBP15.56■□□□□ 0.08
SNX1-214ENST00000625244 POU2F2P09086 479 aa15.56■□□□□ 0.08
SNX1-214ENST00000625244 CALM1P0DP23 149 aa15.56■□□□□ 0.08
SNX1-214ENST00000625244 CALM2P0DP24 149 aa15.56■□□□□ 0.08
SNX1-214ENST00000625244 CALM3P0DP25 149 aa15.56■□□□□ 0.08
SNX1-214ENST00000625244 ZNF252P-AS1Q0IIN9 211 aa15.56■□□□□ 0.08
SNX1-214ENST00000625244 PLA2G2CQ5R387 149 aa15.56■□□□□ 0.08
SNX1-214ENST00000625244 AXDND1Q5T1B0 1012 aaPredicted RBP15.56■□□□□ 0.08
SNX1-214ENST00000625244 CASC1Q6TDU7 716 aa15.56■□□□□ 0.08
SNX1-214ENST00000625244 LNX1Q8TBB1 728 aaPredicted RBP15.56■□□□□ 0.08
SNX1-214ENST00000625244 ZNF334Q9HCZ1 680 aaPredicted RBP15.56■□□□□ 0.08
SNX1-214ENST00000625244 RBM12Q9NTZ6 932 aaKnown RBP15.56■□□□□ 0.08
SNX1-214ENST00000625244 CACNG4Q9UBN1 327 aa15.56■□□□□ 0.08
SNX1-214ENST00000625244 CNTNAP5Q8WYK1 1306 aa15.56■□□□□ 0.08
SNX1-214ENST00000625244 MAFO75444 373 aaPredicted RBP15.55■□□□□ 0.08
SNX1-214ENST00000625244 EPN2O95208 641 aa15.55■□□□□ 0.08
SNX1-214ENST00000625244 CEBPBP17676 345 aa15.55■□□□□ 0.08
SNX1-214ENST00000625244 RAP1GAPP47736 663 aa15.55■□□□□ 0.08
SNX1-214ENST00000625244 PTGDRQ13258 359 aa15.55■□□□□ 0.08
SNX1-214ENST00000625244 HDAC1Q13547 482 aaPredicted RBP15.55■□□□□ 0.08
SNX1-214ENST00000625244 RNF43Q68DV7 783 aa15.55■□□□□ 0.08
SNX1-214ENST00000625244 Q6ZS52 159 aa15.55■□□□□ 0.08
SNX1-214ENST00000625244 MAP4K3Q8IVH8 894 aa15.55■□□□□ 0.08
SNX1-214ENST00000625244 TMTC2Q8N394 836 aa15.55■□□□□ 0.08
SNX1-214ENST00000625244 CNNM3Q8NE01 707 aa15.55■□□□□ 0.08
SNX1-214ENST00000625244 GSTCDQ8NEC7 633 aa15.55■□□□□ 0.08
SNX1-214ENST00000625244 LENG9Q96B70 501 aa15.55■□□□□ 0.08
SNX1-214ENST00000625244 LOXL4Q96JB6 756 aa15.55■□□□□ 0.08
SNX1-214ENST00000625244 TRMT61BQ9BVS5 477 aaKnown RBP15.55■□□□□ 0.08
SNX1-214ENST00000625244 TADA2AO75478 443 aa15.54■□□□□ 0.08
SNX1-214ENST00000625244 RHOP08100 348 aa15.54■□□□□ 0.08
SNX1-214ENST00000625244 CCNE1P24864 410 aa15.54■□□□□ 0.08
SNX1-214ENST00000625244 PSMD5Q16401 504 aa15.54■□□□□ 0.08
SNX1-214ENST00000625244 SOWAHCQ53LP3 525 aaPredicted RBP15.54■□□□□ 0.08
SNX1-214ENST00000625244 XKR3Q5GH77 459 aa15.54■□□□□ 0.08
SNX1-214ENST00000625244 WDR44Q5JSH3 913 aa15.54■□□□□ 0.08
SNX1-214ENST00000625244 TCEAL6Q6IPX3 200 aa15.54■□□□□ 0.08
SNX1-214ENST00000625244 B4GALNT3Q6L9W6 998 aa15.54■□□□□ 0.08
SNX1-214ENST00000625244 WDR5BQ86VZ2 330 aa15.54■□□□□ 0.08
SNX1-214ENST00000625244 CEP57Q86XR8 500 aa15.54■□□□□ 0.08
SNX1-214ENST00000625244 IRF7Q92985 503 aa15.54■□□□□ 0.08
SNX1-214ENST00000625244 TCEAL3Q969E4 200 aa15.54■□□□□ 0.08
SNX1-214ENST00000625244 GJA10Q969M2 543 aa15.54■□□□□ 0.08
SNX1-214ENST00000625244 PAAF1Q9BRP4 392 aa15.54■□□□□ 0.08
SNX1-214ENST00000625244 MTA3Q9BTC8 594 aa15.54■□□□□ 0.08
SNX1-214ENST00000625244 TTPALQ9BTX7 342 aa15.54■□□□□ 0.08
SNX1-214ENST00000625244 SCNM1Q9BWG6 230 aa15.54■□□□□ 0.08
SNX1-214ENST00000625244 APOL6Q9BWW8 343 aa15.54■□□□□ 0.08
SNX1-214ENST00000625244 UNC45AQ9H3U1 944 aa15.54■□□□□ 0.08
SNX1-214ENST00000625244 BARHL2Q9NY43 387 aa15.54■□□□□ 0.08
SNX1-214ENST00000625244 COL4A3BPQ9Y5P4 624 aa15.54■□□□□ 0.08
SNX1-214ENST00000625244 SLC12A7Q9Y666 1083 aa15.54■□□□□ 0.08
SNX1-214ENST00000625244 CENPBP07199 599 aaPredicted RBP15.53■□□□□ 0.08
SNX1-214ENST00000625244 SRGAP2CP0DJJ0 459 aa15.53■□□□□ 0.08
SNX1-214ENST00000625244 GDI1P31150 447 aa15.53■□□□□ 0.08
SNX1-214ENST00000625244 UVSSAQ2YD98 709 aa15.53■□□□□ 0.08
SNX1-214ENST00000625244 FAM78AQ5JUQ0 283 aa15.53■□□□□ 0.08
SNX1-214ENST00000625244 SRGAP1Q7Z6B7 1085 aa15.53■□□□□ 0.08
SNX1-214ENST00000625244 KBTBD6Q86V97 674 aa15.53■□□□□ 0.08
SNX1-214ENST00000625244 MICU3Q86XE3 530 aa15.53■□□□□ 0.08
SNX1-214ENST00000625244 HASPINQ8TF76 798 aa15.53■□□□□ 0.08
SNX1-214ENST00000625244 PIK3R5Q8WYR1 880 aa15.53■□□□□ 0.08
SNX1-214ENST00000625244 GLT8D2Q9H1C3 349 aa15.53■□□□□ 0.08
SNX1-214ENST00000625244 ZFP14Q9HCL3 533 aa15.53■□□□□ 0.08
SNX1-214ENST00000625244 TRPV5Q9NQA5 729 aa15.53■□□□□ 0.08
SNX1-214ENST00000625244 V9GY48 417 aaPredicted RBP15.53■□□□□ 0.08
SNX1-214ENST00000625244 COL4A2P08572 1712 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms