RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 MARCH5Q9NX47 278 aa13.66□□□□□ -0.22
LINC00963-217ENST00000624009 PARP2Q9UGN5 583 aa13.66□□□□□ -0.22
LINC00963-217ENST00000624009 PCDHGC5Q9Y5F6 944 aa13.66□□□□□ -0.22
LINC00963-217ENST00000624009 VWA8A3KMH1 1905 aa13.66□□□□□ -0.22
LINC00963-217ENST00000624009 ABLIM1O14639 778 aa13.65□□□□□ -0.22
LINC00963-217ENST00000624009 SLC16A4O15374 487 aa13.65□□□□□ -0.22
LINC00963-217ENST00000624009 LILRB3O75022 631 aa13.65□□□□□ -0.22
LINC00963-217ENST00000624009 RECQL4O94761 1208 aa13.65□□□□□ -0.22
LINC00963-217ENST00000624009 CXCL14O95715 111 aa13.65□□□□□ -0.22
LINC00963-217ENST00000624009 PIGRP01833 764 aa13.65□□□□□ -0.22
LINC00963-217ENST00000624009 GRM5P41594 1212 aa13.65□□□□□ -0.22
LINC00963-217ENST00000624009 CREMQ03060 361 aa13.65□□□□□ -0.22
LINC00963-217ENST00000624009 PTPN14Q15678 1187 aa13.65□□□□□ -0.22
LINC00963-217ENST00000624009 KYAT1Q16773 422 aa13.65□□□□□ -0.22
LINC00963-217ENST00000624009 EEF1DP3Q658K8 133 aa13.65□□□□□ -0.22
LINC00963-217ENST00000624009 MPZL3Q6UWV2 235 aa13.65□□□□□ -0.22
LINC00963-217ENST00000624009 ALKAL1Q6UXT8 129 aa13.65□□□□□ -0.22
LINC00963-217ENST00000624009 EP400NLQ6ZTU2 488 aa13.65□□□□□ -0.22
LINC00963-217ENST00000624009 RBM23Q86U06 439 aaKnown RBP13.65□□□□□ -0.22
LINC00963-217ENST00000624009 CDR2LQ86X02 465 aaPredicted RBP13.65□□□□□ -0.22
LINC00963-217ENST00000624009 ADHFE1Q8IWW8 467 aa13.65□□□□□ -0.22
LINC00963-217ENST00000624009 BCL7CQ8WUZ0 217 aaPredicted RBP13.65□□□□□ -0.22
LINC00963-217ENST00000624009 EPSTI1Q96J88 318 aa13.65□□□□□ -0.22
LINC00963-217ENST00000624009 PLIN2Q99541 437 aa13.65□□□□□ -0.22
LINC00963-217ENST00000624009 HERC2P3Q9BVR0 1158 aa13.65□□□□□ -0.22
LINC00963-217ENST00000624009 CCDC94Q9BW85 323 aaPredicted RBP13.65□□□□□ -0.22
LINC00963-217ENST00000624009 APOL6Q9BWW8 343 aa13.65□□□□□ -0.22
LINC00963-217ENST00000624009 EMILIN2Q9BXX0 1053 aa13.65□□□□□ -0.22
LINC00963-217ENST00000624009 MRPL17Q9NRX2 175 aaKnown RBP13.65□□□□□ -0.22
LINC00963-217ENST00000624009 DZANK1Q9NVP4 752 aa13.65□□□□□ -0.22
LINC00963-217ENST00000624009 MIOSQ9NXC5 875 aa13.65□□□□□ -0.22
LINC00963-217ENST00000624009 SNTG2Q9NY99 539 aa13.65□□□□□ -0.22
LINC00963-217ENST00000624009 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.64□□□□□ -0.23
LINC00963-217ENST00000624009 C19orf67A6NJJ6 358 aa13.64□□□□□ -0.23
LINC00963-217ENST00000624009 TMEM189-UBE2V1I3L0A0 370 aa13.64□□□□□ -0.23
LINC00963-217ENST00000624009 PTGESO14684 152 aa13.64□□□□□ -0.23
LINC00963-217ENST00000624009 PER2O15055 1255 aa13.64□□□□□ -0.23
LINC00963-217ENST00000624009 SPTLC2O15270 562 aa13.64□□□□□ -0.23
LINC00963-217ENST00000624009 LINC01565O15544 149 aa13.64□□□□□ -0.23
LINC00963-217ENST00000624009 CLASP2O75122 1294 aaKnown RBP13.64□□□□□ -0.23
LINC00963-217ENST00000624009 TBCAO75347 108 aaKnown RBP13.64□□□□□ -0.23
LINC00963-217ENST00000624009 ZSCAN22P10073 491 aaPredicted RBP13.64□□□□□ -0.23
LINC00963-217ENST00000624009 IL9P15248 144 aa13.64□□□□□ -0.23
LINC00963-217ENST00000624009 OR1G1P47890 313 aa13.64□□□□□ -0.23
LINC00963-217ENST00000624009 YARSP54577 528 aaKnown RBP13.64□□□□□ -0.23
LINC00963-217ENST00000624009 DSG1Q02413 1049 aa13.64□□□□□ -0.23
LINC00963-217ENST00000624009 ZP2Q05996 745 aa13.64□□□□□ -0.23
LINC00963-217ENST00000624009 ITIH3Q06033 890 aa13.64□□□□□ -0.23
LINC00963-217ENST00000624009 ELAVL2Q12926 359 aaKnown RBP13.64□□□□□ -0.23
LINC00963-217ENST00000624009 NAB2Q15742 525 aa13.64□□□□□ -0.23
LINC00963-217ENST00000624009 ZNF568Q3ZCX4 644 aa13.64□□□□□ -0.23
LINC00963-217ENST00000624009 TPRNQ4KMQ1 711 aa13.64□□□□□ -0.23
LINC00963-217ENST00000624009 ANKRD54Q6NXT1 300 aa13.64□□□□□ -0.23
LINC00963-217ENST00000624009 HAUS6Q7Z4H7 955 aa13.64□□□□□ -0.23
LINC00963-217ENST00000624009 VN1R2Q8NFZ6 395 aa13.64□□□□□ -0.23
LINC00963-217ENST00000624009 LRRC15Q8TF66 581 aa13.64□□□□□ -0.23
LINC00963-217ENST00000624009 SUSD6Q92537 303 aa13.64□□□□□ -0.23
LINC00963-217ENST00000624009 UROC1Q96N76 676 aa13.64□□□□□ -0.23
LINC00963-217ENST00000624009 TSPAN18Q96SJ8 248 aa13.64□□□□□ -0.23
LINC00963-217ENST00000624009 TARS2Q9BW92 718 aaKnown RBP13.64□□□□□ -0.23
LINC00963-217ENST00000624009 CDT1Q9H211 546 aa13.64□□□□□ -0.23
LINC00963-217ENST00000624009 POLD4Q9HCU8 107 aa13.64□□□□□ -0.23
LINC00963-217ENST00000624009 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.64□□□□□ -0.23
LINC00963-217ENST00000624009 CHST7Q9NS84 486 aa13.64□□□□□ -0.23
LINC00963-217ENST00000624009 SLC38A7Q9NVC3 462 aa13.64□□□□□ -0.23
LINC00963-217ENST00000624009 SEL1LQ9UBV2 794 aa13.64□□□□□ -0.23
LINC00963-217ENST00000624009 DPP7Q9UHL4 492 aa13.64□□□□□ -0.23
LINC00963-217ENST00000624009 ADAM28Q9UKQ2 775 aa13.64□□□□□ -0.23
LINC00963-217ENST00000624009 HCFC2Q9Y5Z7 792 aa13.64□□□□□ -0.23
LINC00963-217ENST00000624009 SF3B1O75533 1304 aaKnown RBP eCLIP13.64□□□□□ -0.238e-6■■■■■ 107
LINC00963-217ENST00000624009 SFI1A8K8P3 1242 aa13.63□□□□□ -0.23
LINC00963-217ENST00000624009 TRAK2O60296 914 aa13.63□□□□□ -0.23
LINC00963-217ENST00000624009 FAM13AO94988 1023 aa13.63□□□□□ -0.23
LINC00963-217ENST00000624009 F13A1P00488 732 aa13.63□□□□□ -0.23
LINC00963-217ENST00000624009 URODP06132 367 aa13.63□□□□□ -0.23
LINC00963-217ENST00000624009 KCNE1P15382 129 aa13.63□□□□□ -0.23
LINC00963-217ENST00000624009 LIG1P18858 919 aa13.63□□□□□ -0.23
LINC00963-217ENST00000624009 GLUD2P49448 558 aa13.63□□□□□ -0.23
LINC00963-217ENST00000624009 GTF2BQ00403 316 aa13.63□□□□□ -0.23
LINC00963-217ENST00000624009 MCL1Q07820 350 aa13.63□□□□□ -0.23
LINC00963-217ENST00000624009 RAD51AP2Q09MP3 1159 aa13.63□□□□□ -0.23
LINC00963-217ENST00000624009 MCM6Q14566 821 aa13.63□□□□□ -0.23
LINC00963-217ENST00000624009 HSP90AA2PQ14568 343 aaPredicted RBP13.63□□□□□ -0.23
LINC00963-217ENST00000624009 NOLC1Q14978 699 aaKnown RBP eCLIP13.63□□□□□ -0.23
LINC00963-217ENST00000624009 STK38Q15208 465 aa13.63□□□□□ -0.23
LINC00963-217ENST00000624009 USP41Q3LFD5 358 aa13.63□□□□□ -0.23
LINC00963-217ENST00000624009 KIAA0319Q5VV43 1072 aa13.63□□□□□ -0.23
LINC00963-217ENST00000624009 RRAGBQ5VZM2 374 aa13.63□□□□□ -0.23
LINC00963-217ENST00000624009 FAM173BQ6P4H8 233 aa13.63□□□□□ -0.23
LINC00963-217ENST00000624009 PDXDC1Q6P996 788 aa13.63□□□□□ -0.23
LINC00963-217ENST00000624009 USP49Q70CQ1 688 aa13.63□□□□□ -0.23
LINC00963-217ENST00000624009 GJD3Q8N144 294 aa13.63□□□□□ -0.23
LINC00963-217ENST00000624009 TMEM87AQ8NBN3 555 aa13.63□□□□□ -0.23
LINC00963-217ENST00000624009 KCNG4Q8TDN1 519 aa13.63□□□□□ -0.23
LINC00963-217ENST00000624009 HVCN1Q96D96 273 aa13.63□□□□□ -0.23
LINC00963-217ENST00000624009 NECTIN4Q96NY8 510 aa13.63□□□□□ -0.23
LINC00963-217ENST00000624009 PPP1R10Q96QC0 940 aaKnown RBP13.63□□□□□ -0.23
LINC00963-217ENST00000624009 RHOBTB2Q9BYZ6 727 aa13.63□□□□□ -0.23
LINC00963-217ENST00000624009 CUEDC2Q9H467 287 aa13.63□□□□□ -0.23
LINC00963-217ENST00000624009 PLEKHA5Q9HAU0 1116 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms