RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 IL18RAPO95256 599 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 ITGBL1O95965 494 aaPredicted RBP9.74□□□□□ -0.85
HDAC9-229ENST00000622668 APOEP02649 317 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 MESDQ14696 234 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 KAZNQ674X7 775 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 LLGL2Q6P1M3 1020 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 SLC27A1Q6PCB7 646 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 TAB3Q8N5C8 712 aaPredicted RBP9.74□□□□□ -0.85
HDAC9-229ENST00000622668 SYT2Q8N9I0 419 aaPredicted RBP9.74□□□□□ -0.85
HDAC9-229ENST00000622668 MCOLN1Q9GZU1 580 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 ZNF112Q9UJU3 913 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 HES2Q9Y543 173 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 BTAF1O14981 1849 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 LCP1P13796 627 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 TBXAS1P24557 533 aaPredicted RBP9.73□□□□□ -0.85
HDAC9-229ENST00000622668 AVPR1AP37288 418 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 MKRN4PQ13434 485 aaPredicted RBP9.73□□□□□ -0.85
HDAC9-229ENST00000622668 PPP6R3Q5H9R7 873 aaPredicted RBP9.73□□□□□ -0.85
HDAC9-229ENST00000622668 TTC39CQ8N584 583 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 PGLYRP2Q96PD5 576 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 UBN1Q9NPG3 1134 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 EML1O00423 815 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 ZBTB39O15060 712 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 EFCAB14O75071 495 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 SCNN1GP51170 649 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 IRX5P78411 483 aaPredicted RBP9.73□□□□□ -0.85
HDAC9-229ENST00000622668 JAG1P78504 1218 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 STKLD1Q8NE28 680 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 RWDD2AQ9UIY3 292 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 FAM50BQ9Y247 325 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 FARP1Q9Y4F1 1045 aaPredicted RBP9.73□□□□□ -0.85
HDAC9-229ENST00000622668 IRS2Q9Y4H2 1338 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.73□□□□□ -0.85
HDAC9-229ENST00000622668 WEE2P0C1S8 567 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 PRR29P0C7W0 189 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 TRIM60Q495X7 471 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 DAAM2Q86T65 1068 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 ZNF410Q86VK4 478 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 TMTC1Q8IUR5 882 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 HELQQ8TDG4 1101 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 INPP4AQ96PE3 977 aaPredicted RBP9.73□□□□□ -0.85
HDAC9-229ENST00000622668 TLE6Q9H808 572 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 DPP3Q9NY33 737 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 TJP2Q9UDY2 1190 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 NAGPAQ9UK23 515 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 STAP1Q9ULZ2 295 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 UBIAD1Q9Y5Z9 338 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 GON4LQ3T8J9 2241 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 PRPSAP2O60256 369 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 CEP104O60308 925 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 GBP1P32455 592 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 GNL1P36915 607 aaPredicted RBP9.73□□□□□ -0.85
HDAC9-229ENST00000622668 RGS7P49802 495 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 NME3Q13232 169 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 DDX53Q86TM3 631 aaKnown RBP9.73□□□□□ -0.85
HDAC9-229ENST00000622668 KIAA0319LQ8IZA0 1049 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 TRIB2Q92519 343 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 IFT122Q9HBG6 1241 aa9.73□□□□□ -0.85
HDAC9-229ENST00000622668 SETD1AO15047 1707 aaKnown RBP9.72□□□□□ -0.85
HDAC9-229ENST00000622668 UBE4BO95155 1302 aa9.72□□□□□ -0.85
HDAC9-229ENST00000622668 PDXKO00764 312 aa9.72□□□□□ -0.85
HDAC9-229ENST00000622668 CYB561D2O14569 222 aa9.72□□□□□ -0.85
HDAC9-229ENST00000622668 CXCL8P10145 99 aa9.72□□□□□ -0.85
HDAC9-229ENST00000622668 ATP2A2P16615 1042 aaKnown RBP9.72□□□□□ -0.85
HDAC9-229ENST00000622668 PNPLA4P41247 253 aa9.72□□□□□ -0.85
HDAC9-229ENST00000622668 ZNF200P98182 395 aaPredicted RBP9.72□□□□□ -0.85
HDAC9-229ENST00000622668 GRIN1Q05586 938 aa9.72□□□□□ -0.85
HDAC9-229ENST00000622668 PDCD6IPQ8WUM4 868 aaKnown RBP9.72□□□□□ -0.85
HDAC9-229ENST00000622668 LPPQ93052 612 aa9.72□□□□□ -0.85
HDAC9-229ENST00000622668 IL17RAQ96F46 866 aa9.72□□□□□ -0.85
HDAC9-229ENST00000622668 MRPL17Q9NRX2 175 aaKnown RBP9.72□□□□□ -0.85
HDAC9-229ENST00000622668 ADAM22Q9P0K1 906 aa9.72□□□□□ -0.85
HDAC9-229ENST00000622668 MLH1P40692 756 aa9.72□□□□□ -0.85
HDAC9-229ENST00000622668 YWHAHQ04917 246 aaPredicted RBP9.72□□□□□ -0.85
HDAC9-229ENST00000622668 STK4Q13043 487 aa9.72□□□□□ -0.85
HDAC9-229ENST00000622668 CALCOCO2Q13137 446 aa9.72□□□□□ -0.85
HDAC9-229ENST00000622668 SGSM1Q2NKQ1 1148 aa9.72□□□□□ -0.85
HDAC9-229ENST00000622668 PSRC1Q6PGN9 363 aaPredicted RBP9.72□□□□□ -0.85
HDAC9-229ENST00000622668 GDAP1Q8TB36 358 aa9.72□□□□□ -0.85
HDAC9-229ENST00000622668 DDX27Q96GQ7 796 aaKnown RBP9.72□□□□□ -0.85
HDAC9-229ENST00000622668 CGNQ9P2M7 1197 aaKnown RBP9.72□□□□□ -0.85
HDAC9-229ENST00000622668 SLITRK3O94933 977 aa9.72□□□□□ -0.85
HDAC9-229ENST00000622668 GNA15P30679 374 aa9.72□□□□□ -0.85
HDAC9-229ENST00000622668 ST8SIA6P61647 398 aa9.72□□□□□ -0.85
HDAC9-229ENST00000622668 CCDC89Q8N998 374 aa9.72□□□□□ -0.85
HDAC9-229ENST00000622668 SLC5A5Q92911 643 aa9.72□□□□□ -0.85
HDAC9-229ENST00000622668 IQCDQ96DY2 449 aa9.72□□□□□ -0.85
HDAC9-229ENST00000622668 C11orf70Q9BRQ4 267 aa9.72□□□□□ -0.85
HDAC9-229ENST00000622668 BCCIPQ9P287 314 aaKnown RBP eCLIP9.72□□□□□ -0.85
HDAC9-229ENST00000622668 H7C0C1 242 aa9.71□□□□□ -0.85
HDAC9-229ENST00000622668 ARVCFO00192 962 aa9.71□□□□□ -0.85
HDAC9-229ENST00000622668 SGPL1O95470 568 aa9.71□□□□□ -0.85
HDAC9-229ENST00000622668 ATP5OP48047 213 aa9.71□□□□□ -0.85
HDAC9-229ENST00000622668 KIF11P52732 1056 aa9.71□□□□□ -0.85
HDAC9-229ENST00000622668 EPHB3P54753 998 aa9.71□□□□□ -0.85
HDAC9-229ENST00000622668 MLLT1Q03111 559 aaPredicted RBP9.71□□□□□ -0.85
HDAC9-229ENST00000622668 PPM1LQ5SGD2 360 aa9.71□□□□□ -0.85
HDAC9-229ENST00000622668 OVOS1Q6IE37 1185 aa9.71□□□□□ -0.85
HDAC9-229ENST00000622668 MTHFD1LQ6UB35 978 aa9.71□□□□□ -0.85
HDAC9-229ENST00000622668 TADA2BQ86TJ2 420 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms