RNA–Protein interactions for RNA: ENST00000622063.4

CHRDL2-210, Transcript of chordin like 2, humanhuman

TSL 5 BASIC

Gene CHRDL2, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-210ENST00000622063 PIGRP01833 764 aa22.47■■□□□ 1.19
CHRDL2-210ENST00000622063 PRKCSHP14314 528 aaPredicted RBP22.47■■□□□ 1.19
CHRDL2-210ENST00000622063 MARSP56192 900 aaKnown RBP22.47■■□□□ 1.19
CHRDL2-210ENST00000622063 SPECC1LQ69YQ0 1117 aa22.47■■□□□ 1.19
CHRDL2-210ENST00000622063 ARMCX5Q6P1M9 558 aa22.47■■□□□ 1.19
CHRDL2-210ENST00000622063 SLC27A1Q6PCB7 646 aa22.47■■□□□ 1.19
CHRDL2-210ENST00000622063 RTN4RL1Q86UN2 441 aaPredicted RBP22.47■■□□□ 1.19
CHRDL2-210ENST00000622063 ADPGKQ9BRR6 497 aa22.47■■□□□ 1.19
CHRDL2-210ENST00000622063 PDZD7Q9H5P4 517 aa22.47■■□□□ 1.19
CHRDL2-210ENST00000622063 CETN3O15182 167 aa22.46■■□□□ 1.19
CHRDL2-210ENST00000622063 TOM1L1O75674 476 aa22.46■■□□□ 1.19
CHRDL2-210ENST00000622063 MATR3P43243 847 aaKnown RBP eCLIP22.46■■□□□ 1.19
CHRDL2-210ENST00000622063 LRMPQ12912 555 aa22.46■■□□□ 1.19
CHRDL2-210ENST00000622063 LINC01599Q8WXQ3 324 aa22.46■■□□□ 1.19
CHRDL2-210ENST00000622063 GDF15Q99988 308 aa22.46■■□□□ 1.19
CHRDL2-210ENST00000622063 TRIM6Q9C030 488 aaPredicted RBP22.46■■□□□ 1.19
CHRDL2-210ENST00000622063 GBP3Q9H0R5 595 aa22.46■■□□□ 1.19
CHRDL2-210ENST00000622063 AGPAT3Q9NRZ7 376 aa22.46■■□□□ 1.19
CHRDL2-210ENST00000622063 ANKFY1Q9P2R3 1169 aa22.46■■□□□ 1.19
CHRDL2-210ENST00000622063 ZBBXA8MT70 800 aa22.46■■□□□ 1.19
CHRDL2-210ENST00000622063 CLDN3O15551 220 aa22.46■■□□□ 1.19
CHRDL2-210ENST00000622063 UBXN1Q04323 297 aa22.46■■□□□ 1.19
CHRDL2-210ENST00000622063 MAN2A1Q16706 1144 aa22.46■■□□□ 1.19
CHRDL2-210ENST00000622063 EEF1DP3Q658K8 133 aa22.46■■□□□ 1.19
CHRDL2-210ENST00000622063 SLC24A5Q71RS6 500 aa22.46■■□□□ 1.19
CHRDL2-210ENST00000622063 APBB1IPQ7Z5R6 666 aaPredicted RBP22.46■■□□□ 1.19
CHRDL2-210ENST00000622063 ZBTB45Q96K62 511 aaPredicted RBP22.46■■□□□ 1.19
CHRDL2-210ENST00000622063 UBE2OQ9C0C9 1292 aaKnown RBP22.46■■□□□ 1.19
CHRDL2-210ENST00000622063 PTPRHQ9HD43 1115 aa22.46■■□□□ 1.19
CHRDL2-210ENST00000622063 C1orf112Q9NSG2 853 aa22.46■■□□□ 1.19
CHRDL2-210ENST00000622063 DMAC2Q9NW81 257 aa22.46■■□□□ 1.19
CHRDL2-210ENST00000622063 ZKSCAN5Q9Y2L8 839 aa22.46■■□□□ 1.19
CHRDL2-210ENST00000622063 TISP43B9A030 160 aa22.45■■□□□ 1.18
CHRDL2-210ENST00000622063 ANKRD63C9JTQ0 380 aa22.45■■□□□ 1.18
CHRDL2-210ENST00000622063 GNA14O95837 355 aa22.45■■□□□ 1.18
CHRDL2-210ENST00000622063 IBSPP21815 317 aaPredicted RBP22.45■■□□□ 1.18
CHRDL2-210ENST00000622063 CASP4P49662 377 aa22.45■■□□□ 1.18
CHRDL2-210ENST00000622063 ZNF568Q3ZCX4 644 aa22.45■■□□□ 1.18
CHRDL2-210ENST00000622063 CEP135Q66GS9 1140 aa22.45■■□□□ 1.18
CHRDL2-210ENST00000622063 MPZL3Q6UWV2 235 aa22.45■■□□□ 1.18
CHRDL2-210ENST00000622063 ZBTB33Q86T24 672 aa22.45■■□□□ 1.18
CHRDL2-210ENST00000622063 LRRC8AQ8IWT6 810 aa22.45■■□□□ 1.18
CHRDL2-210ENST00000622063 TRAIPQ9BWF2 469 aa22.45■■□□□ 1.18
CHRDL2-210ENST00000622063 EIF2AQ9BY44 585 aaKnown RBP22.45■■□□□ 1.18
CHRDL2-210ENST00000622063 FAM105AQ9NUU6 356 aa22.45■■□□□ 1.18
CHRDL2-210ENST00000622063 PDE4DIPQ5VU43 2346 aa22.45■■□□□ 1.18
CHRDL2-210ENST00000622063 ITIH6Q6UXX5 1313 aa22.44■■□□□ 1.18
CHRDL2-210ENST00000622063 A0A0U1RQF3 1178 aa22.44■■□□□ 1.18
CHRDL2-210ENST00000622063 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.44■■□□□ 1.18
CHRDL2-210ENST00000622063 AKAP3O75969 853 aa22.44■■□□□ 1.18
CHRDL2-210ENST00000622063 NPTXRO95502 500 aa22.44■■□□□ 1.18
CHRDL2-210ENST00000622063 PROZP22891 400 aa22.44■■□□□ 1.18
CHRDL2-210ENST00000622063 KCNJ6P48051 423 aa22.44■■□□□ 1.18
CHRDL2-210ENST00000622063 GSDMDP57764 484 aa22.44■■□□□ 1.18
CHRDL2-210ENST00000622063 CCDC40Q4G0X9 1142 aa22.44■■□□□ 1.18
CHRDL2-210ENST00000622063 VWA3BQ502W6 1294 aa22.44■■□□□ 1.18
CHRDL2-210ENST00000622063 UBXN11Q5T124 520 aa22.44■■□□□ 1.18
CHRDL2-210ENST00000622063 SLFN12LQ6IEE8 588 aa22.44■■□□□ 1.18
CHRDL2-210ENST00000622063 SLC39A4Q6P5W5 647 aa22.44■■□□□ 1.18
CHRDL2-210ENST00000622063 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.44■■□□□ 1.18
CHRDL2-210ENST00000622063 HS2ST1Q7LGA3 356 aa22.44■■□□□ 1.18
CHRDL2-210ENST00000622063 TRIM59Q8IWR1 403 aa22.44■■□□□ 1.18
CHRDL2-210ENST00000622063 HERVK_113Q902F9 699 aa22.44■■□□□ 1.18
CHRDL2-210ENST00000622063 MTIF3Q9H2K0 278 aaKnown RBP22.44■■□□□ 1.18
CHRDL2-210ENST00000622063 C9IYK1 514 aa22.43■■□□□ 1.18
CHRDL2-210ENST00000622063 SKIP12755 728 aa22.43■■□□□ 1.18
CHRDL2-210ENST00000622063 RPL13P26373 211 aaKnown RBP22.43■■□□□ 1.18
CHRDL2-210ENST00000622063 RAB27AP51159 221 aa22.43■■□□□ 1.18
CHRDL2-210ENST00000622063 GOLGA8FQ08AF8 430 aa22.43■■□□□ 1.18
CHRDL2-210ENST00000622063 GOLGA8DPQ0D2H9 430 aa22.43■■□□□ 1.18
CHRDL2-210ENST00000622063 DCAF4L1Q3SXM0 396 aa22.43■■□□□ 1.18
CHRDL2-210ENST00000622063 ZSCAN30Q86W11 494 aa22.43■■□□□ 1.18
CHRDL2-210ENST00000622063 POMGNT1Q8WZA1 660 aa22.43■■□□□ 1.18
CHRDL2-210ENST00000622063 PCDHB2Q9Y5E7 798 aa22.43■■□□□ 1.18
CHRDL2-210ENST00000622063 RANBP2P49792 3224 aaKnown RBP22.43■■□□□ 1.18
CHRDL2-210ENST00000622063 PES1O00541 588 aaKnown RBP22.42■■□□□ 1.18
CHRDL2-210ENST00000622063 AMHP03971 560 aa22.42■■□□□ 1.18
CHRDL2-210ENST00000622063 HARSP12081 509 aaKnown RBP22.42■■□□□ 1.18
CHRDL2-210ENST00000622063 WDR5P61964 334 aaKnown RBP22.42■■□□□ 1.18
CHRDL2-210ENST00000622063 MCL1Q07820 350 aa22.42■■□□□ 1.18
CHRDL2-210ENST00000622063 NOLC1Q14978 699 aaKnown RBP eCLIP22.42■■□□□ 1.18
CHRDL2-210ENST00000622063 GOLGA5Q8TBA6 731 aa22.42■■□□□ 1.18
CHRDL2-210ENST00000622063 CDT1Q9H211 546 aa22.42■■□□□ 1.18
CHRDL2-210ENST00000622063 NDST4Q9H3R1 872 aa22.42■■□□□ 1.18
CHRDL2-210ENST00000622063 A0A1W2PQC6 194 aa22.42■■□□□ 1.18
CHRDL2-210ENST00000622063 SLC16A3O15427 465 aaKnown RBP22.42■■□□□ 1.18
CHRDL2-210ENST00000622063 TPM2P07951 284 aa22.42■■□□□ 1.18
CHRDL2-210ENST00000622063 MCF2P10911 925 aa22.42■■□□□ 1.18
CHRDL2-210ENST00000622063 SNRPFP62306 86 aaKnown RBP22.42■■□□□ 1.18
CHRDL2-210ENST00000622063 FAM189BP81408 668 aa22.42■■□□□ 1.18
CHRDL2-210ENST00000622063 C9orf50Q5SZB4 431 aa22.42■■□□□ 1.18
CHRDL2-210ENST00000622063 FRMD5Q7Z6J6 570 aa22.42■■□□□ 1.18
CHRDL2-210ENST00000622063 ECHDC2Q86YB7 292 aa22.42■■□□□ 1.18
CHRDL2-210ENST00000622063 SLC9A9Q8IVB4 645 aa22.42■■□□□ 1.18
CHRDL2-210ENST00000622063 TMEM174Q8WUU8 243 aa22.42■■□□□ 1.18
CHRDL2-210ENST00000622063 BORCS6Q96GS4 357 aa22.42■■□□□ 1.18
CHRDL2-210ENST00000622063 MSTO1Q9BUK6 570 aa22.42■■□□□ 1.18
CHRDL2-210ENST00000622063 RNF216Q9NWF9 866 aaPredicted RBP22.42■■□□□ 1.18
CHRDL2-210ENST00000622063 CXXC1Q9P0U4 656 aaPredicted RBP22.42■■□□□ 1.18
CHRDL2-210ENST00000622063 CGNQ9P2M7 1197 aaKnown RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms