RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 TRPV6Q9H1D0 765 aa20.2■□□□□ 0.82
SEMA6C-210ENST00000621728 STARD7Q9NQZ5 370 aa20.2■□□□□ 0.82
SEMA6C-210ENST00000621728 GCNT4Q9P109 453 aa20.2■□□□□ 0.82
SEMA6C-210ENST00000621728 KBTBD13C9JR72 458 aa20.19■□□□□ 0.82
SEMA6C-210ENST00000621728 RRP9O43818 475 aaKnown RBP20.19■□□□□ 0.82
SEMA6C-210ENST00000621728 PON1P27169 355 aa20.19■□□□□ 0.82
SEMA6C-210ENST00000621728 HOXA11P31270 313 aaPredicted RBP20.19■□□□□ 0.82
SEMA6C-210ENST00000621728 NME8Q8N427 588 aa20.19■□□□□ 0.82
SEMA6C-210ENST00000621728 KIAA1586Q9HCI6 787 aa20.19■□□□□ 0.82
SEMA6C-210ENST00000621728 PHF24Q9UPV7 400 aa20.19■□□□□ 0.82
SEMA6C-210ENST00000621728 ANK1P16157 1881 aa20.19■□□□□ 0.82
SEMA6C-210ENST00000621728 UQCRHLA0A096LP55 91 aa20.19■□□□□ 0.82
SEMA6C-210ENST00000621728 KIAA0391O15091 583 aaKnown RBP20.19■□□□□ 0.82
SEMA6C-210ENST00000621728 LDHAP00338 332 aaKnown RBP20.19■□□□□ 0.82
SEMA6C-210ENST00000621728 CHRNA1P02708 482 aa20.19■□□□□ 0.82
SEMA6C-210ENST00000621728 UQCRHP07919 91 aa20.19■□□□□ 0.82
SEMA6C-210ENST00000621728 CRYBB1P53674 252 aaPredicted RBP20.19■□□□□ 0.82
SEMA6C-210ENST00000621728 CDC42EP1Q00587 391 aa20.19■□□□□ 0.82
SEMA6C-210ENST00000621728 PSMD6Q15008 389 aa20.19■□□□□ 0.82
SEMA6C-210ENST00000621728 EXOC3L4Q17RC7 722 aa20.19■□□□□ 0.82
SEMA6C-210ENST00000621728 GBP6Q6ZN66 633 aa20.19■□□□□ 0.82
SEMA6C-210ENST00000621728 NEK11Q8NG66 645 aa20.19■□□□□ 0.82
SEMA6C-210ENST00000621728 TMC2Q8TDI7 906 aa20.19■□□□□ 0.82
SEMA6C-210ENST00000621728 ZNF516Q92618 1163 aa20.19■□□□□ 0.82
SEMA6C-210ENST00000621728 TMEM117Q9H0C3 514 aa20.19■□□□□ 0.82
SEMA6C-210ENST00000621728 SIX2Q9NPC8 291 aa20.19■□□□□ 0.82
SEMA6C-210ENST00000621728 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.19■□□□□ 0.825e-31■■■■■ 745.3
SEMA6C-210ENST00000621728 AJAP1Q9UKB5 411 aaPredicted RBP20.19■□□□□ 0.82
SEMA6C-210ENST00000621728 CAPN11Q9UMQ6 739 aa20.19■□□□□ 0.82
SEMA6C-210ENST00000621728 HSPA1AP0DMV8 641 aaKnown RBP20.18■□□□□ 0.82
SEMA6C-210ENST00000621728 HSPA1BP0DMV9 641 aaKnown RBP20.18■□□□□ 0.82
SEMA6C-210ENST00000621728 GTF2F1P35269 517 aaKnown RBP eCLIP20.18■□□□□ 0.82
SEMA6C-210ENST00000621728 KRT9P35527 623 aa20.18■□□□□ 0.82
SEMA6C-210ENST00000621728 THPOP40225 353 aa20.18■□□□□ 0.82
SEMA6C-210ENST00000621728 MCCD1P59942 119 aaPredicted RBP20.18■□□□□ 0.82
SEMA6C-210ENST00000621728 TRIM14Q14142 442 aa20.18■□□□□ 0.82
SEMA6C-210ENST00000621728 GJB7Q6PEY0 223 aa20.18■□□□□ 0.82
SEMA6C-210ENST00000621728 TMEM139Q8IV31 216 aa20.18■□□□□ 0.82
SEMA6C-210ENST00000621728 ELMO3Q96BJ8 720 aa20.18■□□□□ 0.82
SEMA6C-210ENST00000621728 FAM212AQ96EL1 285 aa20.18■□□□□ 0.82
SEMA6C-210ENST00000621728 GANQ9H2C0 597 aa20.18■□□□□ 0.82
SEMA6C-210ENST00000621728 NLRC4Q9NPP4 1024 aa20.18■□□□□ 0.82
SEMA6C-210ENST00000621728 CPSF3Q9UKF6 684 aaKnown RBP20.18■□□□□ 0.82
SEMA6C-210ENST00000621728 NOC2LQ9Y3T9 749 aaKnown RBP20.18■□□□□ 0.82
SEMA6C-210ENST00000621728 TRPV2Q9Y5S1 764 aa20.18■□□□□ 0.82
SEMA6C-210ENST00000621728 A0A1B0GUA9 196 aa20.17■□□□□ 0.82
SEMA6C-210ENST00000621728 MEFVO15553 781 aaPredicted RBP20.17■□□□□ 0.82
SEMA6C-210ENST00000621728 MTERF4Q7Z6M4 381 aaKnown RBP20.17■□□□□ 0.82
SEMA6C-210ENST00000621728 BRSK2Q8IWQ3 736 aa20.17■□□□□ 0.82
SEMA6C-210ENST00000621728 C17orf53Q8N3J3 647 aaPredicted RBP20.17■□□□□ 0.82
SEMA6C-210ENST00000621728 ABHD10Q9NUJ1 306 aa20.17■□□□□ 0.82
SEMA6C-210ENST00000621728 NOD1Q9Y239 953 aa20.17■□□□□ 0.82
SEMA6C-210ENST00000621728 B4GALT4O60513 344 aa20.17■□□□□ 0.82
SEMA6C-210ENST00000621728 TPM1P09493 284 aa20.17■□□□□ 0.82
SEMA6C-210ENST00000621728 MXI1P50539 228 aa20.17■□□□□ 0.82
SEMA6C-210ENST00000621728 MGAT3Q09327 533 aa20.17■□□□□ 0.82
SEMA6C-210ENST00000621728 ENOX2Q16206 610 aaKnown RBP20.17■□□□□ 0.82
SEMA6C-210ENST00000621728 SCARA3Q6AZY7 606 aa20.17■□□□□ 0.82
SEMA6C-210ENST00000621728 FAM228AQ86W67 206 aa20.17■□□□□ 0.82
SEMA6C-210ENST00000621728 SLC43A3Q8NBI5 491 aa20.17■□□□□ 0.82
SEMA6C-210ENST00000621728 NUP58Q9BVL2 599 aa20.17■□□□□ 0.82
SEMA6C-210ENST00000621728 EIF2AQ9BY44 585 aaKnown RBP20.17■□□□□ 0.82
SEMA6C-210ENST00000621728 INTS2Q9H0H0 1204 aaKnown RBP20.17■□□□□ 0.82
SEMA6C-210ENST00000621728 OGDHLQ9ULD0 1010 aa20.17■□□□□ 0.82
SEMA6C-210ENST00000621728 LUC7L2Q9Y383 392 aaKnown RBP20.17■□□□□ 0.82
SEMA6C-210ENST00000621728 A0A0U1RQG5 324 aaPredicted RBP20.16■□□□□ 0.82
SEMA6C-210ENST00000621728 DNM1LO00429 736 aa20.16■□□□□ 0.82
SEMA6C-210ENST00000621728 NPTXRO95502 500 aa20.16■□□□□ 0.82
SEMA6C-210ENST00000621728 CXCL8P10145 99 aa20.16■□□□□ 0.82
SEMA6C-210ENST00000621728 MCF2P10911 925 aa20.16■□□□□ 0.82
SEMA6C-210ENST00000621728 SKILP12757 684 aa20.16■□□□□ 0.82
SEMA6C-210ENST00000621728 POLR2FP61218 127 aaKnown RBP20.16■□□□□ 0.82
SEMA6C-210ENST00000621728 TRIM71Q2Q1W2 868 aaKnown RBP20.16■□□□□ 0.82
SEMA6C-210ENST00000621728 FIGNQ5HY92 759 aa20.16■□□□□ 0.82
SEMA6C-210ENST00000621728 TRIM65Q6PJ69 517 aa20.16■□□□□ 0.82
SEMA6C-210ENST00000621728 RSPH3Q86UC2 560 aa20.16■□□□□ 0.82
SEMA6C-210ENST00000621728 CNGA4Q8IV77 575 aa20.16■□□□□ 0.82
SEMA6C-210ENST00000621728 TMEM130Q8N3G9 435 aa20.16■□□□□ 0.82
SEMA6C-210ENST00000621728 SEMA4DQ92854 862 aa20.16■□□□□ 0.82
SEMA6C-210ENST00000621728 SENP6Q9GZR1 1112 aaPredicted RBP20.16■□□□□ 0.82
SEMA6C-210ENST00000621728 KCND1Q9NSA2 647 aa20.16■□□□□ 0.82
SEMA6C-210ENST00000621728 PIN4Q9Y237 131 aaKnown RBP20.16■□□□□ 0.82
SEMA6C-210ENST00000621728 GTPBP10A4D1E9 387 aaKnown RBP20.15■□□□□ 0.82
SEMA6C-210ENST00000621728 M0QZ92 97 aa20.15■□□□□ 0.82
SEMA6C-210ENST00000621728 STAG3L1P0CL83 205 aa20.15■□□□□ 0.82
SEMA6C-210ENST00000621728 TNNI1P19237 187 aa20.15■□□□□ 0.82
SEMA6C-210ENST00000621728 PTPN11Q06124 597 aaPredicted RBP20.15■□□□□ 0.82
SEMA6C-210ENST00000621728 PTK7Q13308 1070 aa20.15■□□□□ 0.82
SEMA6C-210ENST00000621728 EPC2Q52LR7 807 aa20.15■□□□□ 0.82
SEMA6C-210ENST00000621728 E4F1Q66K89 784 aaPredicted RBP20.15■□□□□ 0.82
SEMA6C-210ENST00000621728 FBXO46Q6PJ61 603 aaPredicted RBP20.15■□□□□ 0.82
SEMA6C-210ENST00000621728 OR5B17Q8NGF7 314 aa20.15■□□□□ 0.82
SEMA6C-210ENST00000621728 LMO3Q8TAP4 145 aa20.15■□□□□ 0.82
SEMA6C-210ENST00000621728 BAP1Q92560 729 aa20.15■□□□□ 0.82
SEMA6C-210ENST00000621728 ZNF333Q96JL9 665 aa20.15■□□□□ 0.82
SEMA6C-210ENST00000621728 FNBP1Q96RU3 617 aa20.15■□□□□ 0.82
SEMA6C-210ENST00000621728 TMX1Q9H3N1 280 aa20.15■□□□□ 0.82
SEMA6C-210ENST00000621728 FHOD1Q9Y613 1164 aa20.15■□□□□ 0.82
SEMA6C-210ENST00000621728 KLHDC7AQ5VTJ3 777 aa20.15■□□□□ 0.82
SEMA6C-210ENST00000621728 SV2AQ7L0J3 742 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms