RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 DNAL1Q4LDG9 190 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 PASD1Q8IV76 773 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 BRIP1Q9BX63 1249 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 SYTL2Q9HCH5 934 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 KMT5AQ9NQR1 393 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 POLE3Q9NRF9 147 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 HACL1Q9UJ83 578 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 PCDHB6Q9Y5E3 794 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 COL15A1P39059 1388 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 ANO9A1A5B4 782 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 GRID2IPA4D2P6 1211 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 FOSL2P15408 326 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 PLCG1P19174 1290 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 PTPREP23469 700 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 PTPN12Q05209 780 aaKnown RBP10.45□□□□□ -0.74
COL4A6-210ENST00000621266 KRT39Q6A163 491 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 RWDD4Q6NW29 188 aaKnown RBP10.45□□□□□ -0.74
COL4A6-210ENST00000621266 MICU2Q8IYU8 434 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 RNF25Q96BH1 459 aaPredicted RBP10.45□□□□□ -0.74
COL4A6-210ENST00000621266 MS4A14Q96JA4 679 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 TSSK1BQ9BXA7 367 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 ELP3Q9H9T3 547 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 POLIQ9UNA4 740 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 V9GYQ6 96 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 DNALI1O14645 258 aaPredicted RBP10.45□□□□□ -0.74
COL4A6-210ENST00000621266 TPD52L2O43399 206 aaKnown RBP10.45□□□□□ -0.74
COL4A6-210ENST00000621266 RASSF9O75901 435 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 GSNP06396 782 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 HSPA1AP0DMV8 641 aaKnown RBP10.45□□□□□ -0.74
COL4A6-210ENST00000621266 HSPA1BP0DMV9 641 aaKnown RBP10.45□□□□□ -0.74
COL4A6-210ENST00000621266 HOXD10P28358 340 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 CPA2P48052 419 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 SEC24CP53992 1094 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 RESTQ13127 1097 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 KRT72Q14CN4 511 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 HEXIM2Q96MH2 286 aaKnown RBP10.45□□□□□ -0.74
COL4A6-210ENST00000621266 HPCAL4Q9UM19 191 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 ZHX2Q9Y6X8 837 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 AIM2O14862 343 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 GAP43P17677 238 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 CCDC137Q6PK04 289 aaKnown RBP10.44□□□□□ -0.74
COL4A6-210ENST00000621266 GPR141Q7Z602 305 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 TTC8Q8TAM2 541 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 C1orf54Q8WWF1 131 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 TRABDQ9H4I3 376 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 KLHL31Q9H511 634 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 TDRD3Q9H7E2 651 aaKnown RBP10.44□□□□□ -0.74
COL4A6-210ENST00000621266 KLHL8Q9P2G9 620 aaPredicted RBP10.44□□□□□ -0.74
COL4A6-210ENST00000621266 PCDHA1Q9Y5I3 950 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 RGS5O15539 181 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 CYP21A2P08686 494 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 CCND2P30279 289 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 MAPRE2Q15555 327 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 FASTKD1Q53R41 847 aaKnown RBP10.44□□□□□ -0.74
COL4A6-210ENST00000621266 ASPRV1Q53RT3 343 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 FAM160B1Q5W0V3 765 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 ARHGAP17Q68EM7 881 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 ARHGAP22Q7Z5H3 698 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 NSMCE4AQ9NXX6 385 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 SEL1LQ9UBV2 794 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 GDAQ9Y2T3 454 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 IQCA1LA6NCM1 817 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 LAD1O00515 517 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 CAND2O75155 1236 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 DGKIO75912 1065 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 CASP1P29466 404 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 OSTNP61366 133 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 PLEKHA7Q6IQ23 1121 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 TTC33Q6PID6 262 aaPredicted RBP10.44□□□□□ -0.74
COL4A6-210ENST00000621266 CLEC4GQ6UXB4 293 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 ZNF786Q8N393 782 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 RIN3Q8TB24 985 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 ULK4Q96C45 1275 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 AMNQ9BXJ7 453 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 RRAGCQ9HB90 399 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 PAPOLBQ9NRJ5 636 aaKnown RBP10.44□□□□□ -0.74
COL4A6-210ENST00000621266 AMACRQ9UHK6 382 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 AXIN2Q9Y2T1 843 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 TARSL2A2RTX5 802 aaKnown RBP10.44□□□□□ -0.74
COL4A6-210ENST00000621266 PIK3R2O00459 728 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 KCTD21Q4G0X4 260 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 BNIPLQ7Z465 357 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 SCG3Q8WXD2 468 aaKnown RBP10.44□□□□□ -0.74
COL4A6-210ENST00000621266 DONSONQ9NYP3 566 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 CNOT8Q9UFF9 292 aaKnown RBP10.44□□□□□ -0.74
COL4A6-210ENST00000621266 BLOC1S6Q9UL45 172 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 OVOS2A0A0G2JMS6 1433 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 OVOS2A0A0J9YW53 1432 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 CCT8L1PA6NM43 557 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 ZNF263O14978 683 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 ANGPT2O15123 496 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 BNIP3LO60238 219 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 CRKP46108 304 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 OVOS2Q6IE36 1432 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 NLRP9Q7RTR0 991 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 ACAP3Q96P50 834 aa10.44□□□□□ -0.74
COL4A6-210ENST00000621266 RNF26Q9BY78 433 aaPredicted RBP10.44□□□□□ -0.74
COL4A6-210ENST00000621266 M0R2C6 588 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 KCNA2P16389 499 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 TARSP26639 723 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms