RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 CCND1P24385 295 aa20.96■□□□□ 0.95
PDLIM3-212ENST00000620787 IVDP26440 423 aa20.96■□□□□ 0.95
PDLIM3-212ENST00000620787 FMO1Q01740 532 aa20.96■□□□□ 0.95
PDLIM3-212ENST00000620787 CETN1Q12798 172 aa20.96■□□□□ 0.95
PDLIM3-212ENST00000620787 FAM212AQ96EL1 285 aa20.96■□□□□ 0.95
PDLIM3-212ENST00000620787 RMDN2Q96LZ7 410 aa20.96■□□□□ 0.95
PDLIM3-212ENST00000620787 ZNF570Q96NI8 536 aa20.96■□□□□ 0.95
PDLIM3-212ENST00000620787 TTC4O95801 387 aa20.95■□□□□ 0.94
PDLIM3-212ENST00000620787 SERPINB2P05120 415 aa20.95■□□□□ 0.94
PDLIM3-212ENST00000620787 CACNB3P54284 484 aa20.95■□□□□ 0.94
PDLIM3-212ENST00000620787 MAP2K1Q02750 393 aaPredicted RBP20.95■□□□□ 0.94
PDLIM3-212ENST00000620787 TCP10Q12799 353 aa20.95■□□□□ 0.94
PDLIM3-212ENST00000620787 LLGL1Q15334 1064 aa20.95■□□□□ 0.94
PDLIM3-212ENST00000620787 PLEKHO2Q8TD55 490 aa20.95■□□□□ 0.94
PDLIM3-212ENST00000620787 C7orf43Q8WVR3 580 aa20.95■□□□□ 0.94
PDLIM3-212ENST00000620787 ZNF653Q96CK0 615 aa20.95■□□□□ 0.94
PDLIM3-212ENST00000620787 PLCD4Q9BRC7 762 aa20.95■□□□□ 0.94
PDLIM3-212ENST00000620787 K7ENM7 598 aa20.95■□□□□ 0.94
PDLIM3-212ENST00000620787 GAS7O60861 476 aa20.95■□□□□ 0.94
PDLIM3-212ENST00000620787 ADRA2BP18089 450 aa20.95■□□□□ 0.94
PDLIM3-212ENST00000620787 ITIH2P19823 946 aa20.95■□□□□ 0.94
PDLIM3-212ENST00000620787 SNX1Q13596 522 aa20.95■□□□□ 0.94
PDLIM3-212ENST00000620787 ZKSCAN8Q15776 578 aaPredicted RBP20.95■□□□□ 0.94
PDLIM3-212ENST00000620787 SGO2Q562F6 1265 aa20.95■□□□□ 0.94
PDLIM3-212ENST00000620787 SLC47A2Q86VL8 602 aa20.95■□□□□ 0.94
PDLIM3-212ENST00000620787 KREMEN1Q96MU8 473 aa20.95■□□□□ 0.94
PDLIM3-212ENST00000620787 TGS1Q96RS0 853 aaKnown RBP20.95■□□□□ 0.94
PDLIM3-212ENST00000620787 ASIC3Q9UHC3 531 aa20.95■□□□□ 0.94
PDLIM3-212ENST00000620787 GTF3C4Q9UKN8 822 aa20.95■□□□□ 0.94
PDLIM3-212ENST00000620787 TRIM33Q9UPN9 1127 aa20.95■□□□□ 0.94
PDLIM3-212ENST00000620787 CYP26A1O43174 497 aa20.94■□□□□ 0.94
PDLIM3-212ENST00000620787 BRAFP15056 766 aa20.94■□□□□ 0.94
PDLIM3-212ENST00000620787 MGAT5Q09328 741 aa20.94■□□□□ 0.94
PDLIM3-212ENST00000620787 RASA3Q14644 834 aa20.94■□□□□ 0.94
PDLIM3-212ENST00000620787 NSMFQ6X4W1 530 aa20.94■□□□□ 0.94
PDLIM3-212ENST00000620787 SPICE1Q8N0Z3 855 aa20.94■□□□□ 0.94
PDLIM3-212ENST00000620787 CYP4X1Q8N118 509 aa20.94■□□□□ 0.94
PDLIM3-212ENST00000620787 ZSWIM2Q8NEG5 633 aa20.94■□□□□ 0.94
PDLIM3-212ENST00000620787 SNF8Q96H20 258 aa20.94■□□□□ 0.94
PDLIM3-212ENST00000620787 IFT74Q96LB3 600 aa20.94■□□□□ 0.94
PDLIM3-212ENST00000620787 UNC45AQ9H3U1 944 aa20.94■□□□□ 0.94
PDLIM3-212ENST00000620787 TCEA3O75764 348 aa20.94■□□□□ 0.94
PDLIM3-212ENST00000620787 MSH2P43246 934 aa20.94■□□□□ 0.94
PDLIM3-212ENST00000620787 KYNUQ16719 465 aa20.94■□□□□ 0.94
PDLIM3-212ENST00000620787 TATDN1Q6P1N9 297 aa20.94■□□□□ 0.94
PDLIM3-212ENST00000620787 TMEM179Q6ZVK1 233 aa20.94■□□□□ 0.94
PDLIM3-212ENST00000620787 SH3BP5LQ7L8J4 393 aa20.94■□□□□ 0.94
PDLIM3-212ENST00000620787 ANKLE1Q8NAG6 615 aa20.94■□□□□ 0.94
PDLIM3-212ENST00000620787 CBWD1Q9BRT8 395 aa20.94■□□□□ 0.94
PDLIM3-212ENST00000620787 BATF3Q9NR55 127 aa20.94■□□□□ 0.94
PDLIM3-212ENST00000620787 CHST7Q9NS84 486 aa20.94■□□□□ 0.94
PDLIM3-212ENST00000620787 DNAJC17Q9NVM6 304 aaKnown RBP20.94■□□□□ 0.94
PDLIM3-212ENST00000620787 UVRAGQ9P2Y5 699 aa20.94■□□□□ 0.94
PDLIM3-212ENST00000620787 DIAPH2O60879 1101 aa20.93■□□□□ 0.94
PDLIM3-212ENST00000620787 GDF11O95390 407 aa20.93■□□□□ 0.94
PDLIM3-212ENST00000620787 BMP3P12645 472 aa20.93■□□□□ 0.94
PDLIM3-212ENST00000620787 PDE6BP35913 854 aa20.93■□□□□ 0.94
PDLIM3-212ENST00000620787 ITGA8P53708 1063 aa20.93■□□□□ 0.94
PDLIM3-212ENST00000620787 MKRN3Q13064 507 aaKnown RBP20.93■□□□□ 0.94
PDLIM3-212ENST00000620787 PTK6Q13882 451 aa20.93■□□□□ 0.94
PDLIM3-212ENST00000620787 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.93■□□□□ 0.94
PDLIM3-212ENST00000620787 STK38LQ9Y2H1 464 aa20.93■□□□□ 0.94
PDLIM3-212ENST00000620787 USP20Q9Y2K6 914 aa20.93■□□□□ 0.94
PDLIM3-212ENST00000620787 NRXN2Q9P2S2 1712 aa20.93■□□□□ 0.94
PDLIM3-212ENST00000620787 ARHGEF35A5YM69 484 aa20.93■□□□□ 0.94
PDLIM3-212ENST00000620787 CETPP11597 493 aa20.93■□□□□ 0.94
PDLIM3-212ENST00000620787 CCNB1P14635 433 aa20.93■□□□□ 0.94
PDLIM3-212ENST00000620787 CRKP46108 304 aa20.93■□□□□ 0.94
PDLIM3-212ENST00000620787 RNF43Q68DV7 783 aa20.93■□□□□ 0.94
PDLIM3-212ENST00000620787 BZW1Q7L1Q6 419 aaKnown RBP20.93■□□□□ 0.94
PDLIM3-212ENST00000620787 ERICH1Q86X53 443 aa20.93■□□□□ 0.94
PDLIM3-212ENST00000620787 SP8Q8IXZ3 490 aa20.93■□□□□ 0.94
PDLIM3-212ENST00000620787 MAGEB18Q96M61 343 aa20.93■□□□□ 0.94
PDLIM3-212ENST00000620787 LXNQ9BS40 222 aa20.93■□□□□ 0.94
PDLIM3-212ENST00000620787 TRIM6Q9C030 488 aaPredicted RBP20.93■□□□□ 0.94
PDLIM3-212ENST00000620787 NINJ2Q9NZG7 142 aa20.93■□□□□ 0.94
PDLIM3-212ENST00000620787 PI4KBQ9UBF8 816 aa20.93■□□□□ 0.94
PDLIM3-212ENST00000620787 LGALS13Q9UHV8 139 aa20.93■□□□□ 0.94
PDLIM3-212ENST00000620787 PCDHAC2Q9Y5I4 1007 aa20.93■□□□□ 0.94
PDLIM3-212ENST00000620787 ADGRA3Q8IWK6 1321 aa20.92■□□□□ 0.94
PDLIM3-212ENST00000620787 CCDC189A1A4V9 331 aa20.92■□□□□ 0.94
PDLIM3-212ENST00000620787 PPEF1O14829 653 aaPredicted RBP20.92■□□□□ 0.94
PDLIM3-212ENST00000620787 UBXN2AP68543 259 aa20.92■□□□□ 0.94
PDLIM3-212ENST00000620787 DOK7Q18PE1 504 aa20.92■□□□□ 0.94
PDLIM3-212ENST00000620787 TMEM174Q8WUU8 243 aa20.92■□□□□ 0.94
PDLIM3-212ENST00000620787 ATG4AQ8WYN0 398 aa20.92■□□□□ 0.94
PDLIM3-212ENST00000620787 SHC3Q92529 594 aa20.92■□□□□ 0.94
PDLIM3-212ENST00000620787 TMEM117Q9H0C3 514 aa20.92■□□□□ 0.94
PDLIM3-212ENST00000620787 ADAM22Q9P0K1 906 aa20.92■□□□□ 0.94
PDLIM3-212ENST00000620787 FAM198AQ9UFP1 575 aa20.92■□□□□ 0.94
PDLIM3-212ENST00000620787 PRR12Q9ULL5 1215 aa20.92■□□□□ 0.94
PDLIM3-212ENST00000620787 TULP1O00294 542 aaPredicted RBP20.92■□□□□ 0.94
PDLIM3-212ENST00000620787 CFBP00751 764 aa20.92■□□□□ 0.94
PDLIM3-212ENST00000620787 GYS1P13807 737 aa20.92■□□□□ 0.94
PDLIM3-212ENST00000620787 STX2P32856 288 aa20.92■□□□□ 0.94
PDLIM3-212ENST00000620787 C12orf56Q8IXR9 622 aa20.92■□□□□ 0.94
PDLIM3-212ENST00000620787 SLC5A4Q9NY91 659 aa20.92■□□□□ 0.94
PDLIM3-212ENST00000620787 UBR3Q6ZT12 1888 aa20.91■□□□□ 0.94
PDLIM3-212ENST00000620787 THAP12O43422 761 aa20.91■□□□□ 0.94
PDLIM3-212ENST00000620787 MXI1P50539 228 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms