RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 GRM5P41594 1212 aa11.82□□□□□ -0.52
TARDBP-223ENST00000620632 LIG4P49917 911 aa11.82□□□□□ -0.52
TARDBP-223ENST00000620632 OSTNP61366 133 aa11.82□□□□□ -0.52
TARDBP-223ENST00000620632 DPYDQ12882 1025 aa11.82□□□□□ -0.52
TARDBP-223ENST00000620632 CAMK1Q14012 370 aa11.82□□□□□ -0.52
TARDBP-223ENST00000620632 NOLC1Q14978 699 aaKnown RBP eCLIP11.82□□□□□ -0.52
TARDBP-223ENST00000620632 KMT5BQ4FZB7 885 aa11.82□□□□□ -0.52
TARDBP-223ENST00000620632 FAM26FQ5R3K3 315 aa11.82□□□□□ -0.52
TARDBP-223ENST00000620632 SPOUT1Q5T280 376 aaKnown RBP11.82□□□□□ -0.52
TARDBP-223ENST00000620632 L1TD1Q5T7N2 865 aaKnown RBP11.82□□□□□ -0.52
TARDBP-223ENST00000620632 EPM2AIP1Q7L775 607 aaPredicted RBP11.82□□□□□ -0.52
TARDBP-223ENST00000620632 THNSL1Q8IYQ7 743 aa11.82□□□□□ -0.52
TARDBP-223ENST00000620632 TMEM130Q8N3G9 435 aa11.82□□□□□ -0.52
TARDBP-223ENST00000620632 KLHL23Q8NBE8 558 aa11.82□□□□□ -0.52
TARDBP-223ENST00000620632 KIAA0895Q8NCT3 520 aa11.82□□□□□ -0.52
TARDBP-223ENST00000620632 ZSWIM2Q8NEG5 633 aa11.82□□□□□ -0.52
TARDBP-223ENST00000620632 BCL7CQ8WUZ0 217 aaPredicted RBP11.82□□□□□ -0.52
TARDBP-223ENST00000620632 BICD1Q96G01 975 aa11.82□□□□□ -0.52
TARDBP-223ENST00000620632 SAMD11Q96NU1 681 aa11.82□□□□□ -0.52
TARDBP-223ENST00000620632 MRPL9Q9BYD2 267 aaKnown RBP11.82□□□□□ -0.52
TARDBP-223ENST00000620632 GBP3Q9H0R5 595 aa11.82□□□□□ -0.52
TARDBP-223ENST00000620632 ALG13Q9NP73 1137 aaKnown RBP11.82□□□□□ -0.52
TARDBP-223ENST00000620632 SPTBN5Q9NRC6 3674 aaKnown RBP11.82□□□□□ -0.52
TARDBP-223ENST00000620632 VWA8A3KMH1 1905 aa11.82□□□□□ -0.52
TARDBP-223ENST00000620632 XIRP2A4UGR9 3374 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 PVALEFA0A1B0GWK0 134 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 GOLGA6L4A6NEF3 574 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 F8W810 466 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 ZC3H11AO75152 810 aaKnown RBP eCLIP11.81□□□□□ -0.521e-7■■□□□ 12
TARDBP-223ENST00000620632 FOSL2P15408 326 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 LAG3P18627 525 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 SCP2P22307 547 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 SLC11A1P49279 550 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 BCAR1P56945 870 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 FAM160A1Q05DH4 1040 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 DSC1Q08554 894 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 GPM6BQ13491 265 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 PNOCQ13519 176 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 NAB2Q15742 525 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 GLRA4Q5JXX5 417 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 KCNT2Q6UVM3 1135 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 ALKAL1Q6UXT8 129 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 CLEC17AQ6ZS10 378 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 COLGALT2Q8IYK4 626 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 SLC17A8Q8NDX2 589 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 URGCPQ8TCY9 931 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 SCFD1Q8WVM8 642 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 ERCC4Q92889 916 aaPredicted RBP11.81□□□□□ -0.52
TARDBP-223ENST00000620632 P2RX5Q93086 422 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 HVCN1Q96D96 273 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 TCHPQ9BT92 498 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 SLC39A2Q9NP94 309 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 UBN1Q9NPG3 1134 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 RWDD3Q9Y3V2 267 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 MTCH2Q9Y6C9 303 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 STYXL1Q9Y6J8 313 aa11.81□□□□□ -0.52
TARDBP-223ENST00000620632 A0A0B4J269 797 aa11.8□□□□□ -0.52
TARDBP-223ENST00000620632 CLDN3O15551 220 aa11.8□□□□□ -0.52
TARDBP-223ENST00000620632 FGF18O76093 207 aa11.8□□□□□ -0.52
TARDBP-223ENST00000620632 CSPG5O95196 566 aa11.8□□□□□ -0.52
TARDBP-223ENST00000620632 RPN1P04843 607 aaKnown RBP11.8□□□□□ -0.52
TARDBP-223ENST00000620632 RB1P06400 928 aa11.8□□□□□ -0.52
TARDBP-223ENST00000620632 GALTP07902 379 aa11.8□□□□□ -0.52
TARDBP-223ENST00000620632 POU3F3P20264 500 aaPredicted RBP11.8□□□□□ -0.52
TARDBP-223ENST00000620632 IGFBP4P22692 258 aa11.8□□□□□ -0.52
TARDBP-223ENST00000620632 RNASELQ05823 741 aaKnown RBP11.8□□□□□ -0.52
TARDBP-223ENST00000620632 STK4Q13043 487 aa11.8□□□□□ -0.52
TARDBP-223ENST00000620632 SLC10A6Q3KNW5 377 aa11.8□□□□□ -0.52
TARDBP-223ENST00000620632 XKR4Q5GH76 650 aa11.8□□□□□ -0.52
TARDBP-223ENST00000620632 HACE1Q8IYU2 909 aa11.8□□□□□ -0.52
TARDBP-223ENST00000620632 SLC39A11Q8N1S5 342 aa11.8□□□□□ -0.52
TARDBP-223ENST00000620632 ZNF507Q8TCN5 953 aa11.8□□□□□ -0.52
TARDBP-223ENST00000620632 SPPL3Q8TCT6 385 aa11.8□□□□□ -0.52
TARDBP-223ENST00000620632 RABGGTAQ92696 567 aa11.8□□□□□ -0.52
TARDBP-223ENST00000620632 SNX27Q96L92 541 aa11.8□□□□□ -0.52
TARDBP-223ENST00000620632 ZMAT2Q96NC0 199 aaKnown RBP11.8□□□□□ -0.52
TARDBP-223ENST00000620632 ACCSQ96QU6 501 aa11.8□□□□□ -0.52
TARDBP-223ENST00000620632 GAS2L1Q99501 681 aaPredicted RBP11.8□□□□□ -0.52
TARDBP-223ENST00000620632 PAAF1Q9BRP4 392 aa11.8□□□□□ -0.52
TARDBP-223ENST00000620632 C11orf84Q9BUA3 381 aaPredicted RBP11.8□□□□□ -0.52
TARDBP-223ENST00000620632 PLVAPQ9BX97 442 aa11.8□□□□□ -0.52
TARDBP-223ENST00000620632 VN1R3Q9BXE9 311 aa11.8□□□□□ -0.52
TARDBP-223ENST00000620632 MARCH5Q9NX47 278 aa11.8□□□□□ -0.52
TARDBP-223ENST00000620632 STXBP5LQ9Y2K9 1186 aa11.8□□□□□ -0.52
TARDBP-223ENST00000620632 PCDHGC5Q9Y5F6 944 aa11.8□□□□□ -0.52
TARDBP-223ENST00000620632 OGTO15294 1046 aa11.79□□□□□ -0.52
TARDBP-223ENST00000620632 EIF3DO15371 548 aaKnown RBP eCLIP11.79□□□□□ -0.52
TARDBP-223ENST00000620632 TGFB1I1O43294 461 aa11.79□□□□□ -0.52
TARDBP-223ENST00000620632 PRPF40AO75400 957 aaKnown RBP11.79□□□□□ -0.52
TARDBP-223ENST00000620632 CXCL8P10145 99 aa11.79□□□□□ -0.52
TARDBP-223ENST00000620632 IGFBP6P24592 240 aaPredicted RBP11.79□□□□□ -0.52
TARDBP-223ENST00000620632 ABCD1P33897 745 aa11.79□□□□□ -0.52
TARDBP-223ENST00000620632 IRS1P35568 1242 aa11.79□□□□□ -0.52
TARDBP-223ENST00000620632 MATR3P43243 847 aaKnown RBP eCLIP11.79□□□□□ -0.52
TARDBP-223ENST00000620632 WNT7BP56706 349 aa11.79□□□□□ -0.52
TARDBP-223ENST00000620632 SOX4Q06945 474 aaPredicted RBP11.79□□□□□ -0.52
TARDBP-223ENST00000620632 GRIK3Q13003 919 aa11.79□□□□□ -0.52
TARDBP-223ENST00000620632 ALCAMQ13740 583 aa11.79□□□□□ -0.52
TARDBP-223ENST00000620632 POSTNQ15063 836 aa11.79□□□□□ -0.52
TARDBP-223ENST00000620632 CSPP1Q1MSJ5 1256 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms