RNA–Protein interactions for RNA: ENST00000619172.4

LINC01660-204, Transcript of long intergenic non-protein coding RNA 1660, humanhuman

TSL 5 BASIC

Gene LINC01660, Length 3,572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01660-204ENST00000619172 GPS1Q13098 491 aa10.1□□□□□ -0.79
LINC01660-204ENST00000619172 PALM2Q8IXS6 379 aa10.1□□□□□ -0.79
LINC01660-204ENST00000619172 SCFD2Q8WU76 684 aa10.1□□□□□ -0.79
LINC01660-204ENST00000619172 DCAF4Q8WV16 495 aa10.1□□□□□ -0.79
LINC01660-204ENST00000619172 ERP27Q96DN0 273 aa10.1□□□□□ -0.79
LINC01660-204ENST00000619172 TMEM237Q96Q45 408 aa10.1□□□□□ -0.79
LINC01660-204ENST00000619172 RMDN3Q96TC7 470 aa10.1□□□□□ -0.79
LINC01660-204ENST00000619172 PNMA3Q9UL41 463 aa10.1□□□□□ -0.79
LINC01660-204ENST00000619172 NFIBO00712 420 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 KRT1P04264 644 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 KITP10721 976 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 TARSP26639 723 aaKnown RBP10.09□□□□□ -0.79
LINC01660-204ENST00000619172 MSH2P43246 934 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 ORC1Q13415 861 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 TAF11Q15544 211 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 PPP2R5EQ16537 467 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 P3H1Q32P28 736 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 IZUMO3Q5VZ72 239 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 CCDC33Q8N5R6 958 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 SPDL1Q96EA4 605 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 SMC6Q96SB8 1091 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 ZSWIM1Q9BR11 485 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 MTFR1LQ9H019 292 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 RAB20Q9NX57 234 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 SUFUQ9UMX1 484 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 FZD1Q9UP38 647 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 TRAF3IP3Q9Y228 551 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 A8MUI8 341 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 ZSCAN5DPP0CG00 497 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 YWHABP31946 246 aaKnown RBP10.09□□□□□ -0.79
LINC01660-204ENST00000619172 COILP38432 576 aaPredicted RBP10.09□□□□□ -0.79
LINC01660-204ENST00000619172 PTENP60484 403 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 TFAMQ00059 246 aaKnown RBP10.09□□□□□ -0.79
LINC01660-204ENST00000619172 RNASELQ05823 741 aaKnown RBP10.09□□□□□ -0.79
LINC01660-204ENST00000619172 CDO1Q16878 200 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 SWSAP1Q6NVH7 229 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 LRIG3Q6UXM1 1119 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 SLC13A5Q86YT5 568 aaPredicted RBP10.09□□□□□ -0.79
LINC01660-204ENST00000619172 PRELID2Q8N945 189 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 HIPK4Q8NE63 616 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 DTX3LQ8TDB6 740 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 P2RX7Q99572 595 aaKnown RBP10.09□□□□□ -0.79
LINC01660-204ENST00000619172 WDR18Q9BV38 432 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 EXOC7Q9UPT5 735 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 SPEF2Q9C093 1822 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 MIF4GDA9UHW6 222 aaKnown RBP10.09□□□□□ -0.79
LINC01660-204ENST00000619172 TLR3O15455 904 aaKnown RBP10.09□□□□□ -0.79
LINC01660-204ENST00000619172 BAG2O95816 211 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 POLGP54098 1239 aaPredicted RBP10.09□□□□□ -0.79
LINC01660-204ENST00000619172 YWHAGP61981 247 aaKnown RBP eCLIP10.09□□□□□ -0.79
LINC01660-204ENST00000619172 IL9RQ01113 521 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 SEMA3FQ13275 785 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 ORC2Q13416 577 aaPredicted RBP10.09□□□□□ -0.79
LINC01660-204ENST00000619172 TRPC3Q13507 836 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 ACCSLQ4AC99 568 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 ANKRD20A3Q5VUR7 823 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 CASC4Q6P4E1 433 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 ZNF662Q6ZS27 426 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 ARMCX6Q7L4S7 300 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 NOP9Q86U38 636 aaKnown RBP10.09□□□□□ -0.79
LINC01660-204ENST00000619172 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.09□□□□□ -0.79
LINC01660-204ENST00000619172 TTC17Q96AE7 1141 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 TMEM143Q96AN5 459 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 RBM15Q96T37 977 aaKnown RBP eCLIP10.09□□□□□ -0.79
LINC01660-204ENST00000619172 KCNMB3Q9NPA1 279 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 GINM1Q9NU53 330 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.09□□□□□ -0.79
LINC01660-204ENST00000619172 SAE1Q9UBE0 346 aaPredicted RBP10.09□□□□□ -0.79
LINC01660-204ENST00000619172 GABBR1Q9UBS5 961 aa10.09□□□□□ -0.79
LINC01660-204ENST00000619172 DUOX1Q9NRD9 1551 aa10.08□□□□□ -0.8
LINC01660-204ENST00000619172 MARF1Q9Y4F3 1742 aaKnown RBP10.08□□□□□ -0.8
LINC01660-204ENST00000619172 EP400Q96L91 3159 aa10.08□□□□□ -0.8
LINC01660-204ENST00000619172 SRGAP2CP0DJJ0 459 aa10.08□□□□□ -0.8
LINC01660-204ENST00000619172 QARSP47897 775 aaKnown RBP10.08□□□□□ -0.8
LINC01660-204ENST00000619172 DDR1Q08345 913 aa10.08□□□□□ -0.8
LINC01660-204ENST00000619172 MUM1Q2TAK8 710 aa10.08□□□□□ -0.8
LINC01660-204ENST00000619172 ATP13A4Q4VNC1 1196 aa10.08□□□□□ -0.8
LINC01660-204ENST00000619172 KCNT1Q5JUK3 1230 aa10.08□□□□□ -0.8
LINC01660-204ENST00000619172 ARHGEF18Q6ZSZ5 1173 aa10.08□□□□□ -0.8
LINC01660-204ENST00000619172 OTOP1Q7RTM1 612 aa10.08□□□□□ -0.8
LINC01660-204ENST00000619172 SPATA21Q7Z572 469 aa10.08□□□□□ -0.8
LINC01660-204ENST00000619172 MSL3Q8N5Y2 521 aaKnown RBP10.08□□□□□ -0.8
LINC01660-204ENST00000619172 LRRC57Q8N9N7 239 aa10.08□□□□□ -0.8
LINC01660-204ENST00000619172 PRPF38AQ8NAV1 312 aaKnown RBP10.08□□□□□ -0.8
LINC01660-204ENST00000619172 DEPTORQ8TB45 409 aa10.08□□□□□ -0.8
LINC01660-204ENST00000619172 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.08□□□□□ -0.8
LINC01660-204ENST00000619172 CYTH2Q99418 400 aa10.08□□□□□ -0.8
LINC01660-204ENST00000619172 TMEM206Q9H813 350 aa10.08□□□□□ -0.8
LINC01660-204ENST00000619172 ZHX2Q9Y6X8 837 aa10.08□□□□□ -0.8
LINC01660-204ENST00000619172 C4AP0C0L4 1744 aa10.08□□□□□ -0.8
LINC01660-204ENST00000619172 C4BP0C0L5 1744 aa10.08□□□□□ -0.8
LINC01660-204ENST00000619172 CFAP69A5D8W1 941 aa10.08□□□□□ -0.8
LINC01660-204ENST00000619172 LCA5LO95447 670 aa10.08□□□□□ -0.8
LINC01660-204ENST00000619172 CNGA1P29973 690 aa10.08□□□□□ -0.8
LINC01660-204ENST00000619172 HOXD13P35453 343 aa10.08□□□□□ -0.8
LINC01660-204ENST00000619172 CHKAP35790 457 aa10.08□□□□□ -0.8
LINC01660-204ENST00000619172 CPA2P48052 419 aa10.08□□□□□ -0.8
LINC01660-204ENST00000619172 DHX34Q14147 1143 aaKnown RBP10.08□□□□□ -0.8
LINC01660-204ENST00000619172 KRT39Q6A163 491 aa10.08□□□□□ -0.8
LINC01660-204ENST00000619172 CDAN1Q8IWY9 1227 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms