RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 MXRA8Q9BRK3 442 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 WDR11Q9BZH6 1224 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 GOLPH3Q9H4A6 298 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 METTL14Q9HCE5 456 aaKnown RBP7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 RGL1Q9NZL6 768 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 ZNF214Q9UL59 606 aaPredicted RBP7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 SSC5DA1L4H1 1573 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 TMEM110-MUSTN1A8MSY1 372 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 ATG7O95352 703 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 FERP16591 822 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 TNFAIP3P21580 790 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 MTMR1Q13613 665 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 CTTNQ14247 550 aaKnown RBP7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 SEL1L2Q5TEA6 688 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 TBC1D1Q86TI0 1168 aaPredicted RBP7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 NPAS4Q8IUM7 802 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 FUKQ8N0W3 1084 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 UBL4BQ8N7F7 174 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 ETNPPLQ8TBG4 499 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 XPO6Q96QU8 1125 aaKnown RBP7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 KCNK9Q9NPC2 374 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 NMRK2Q9NPI5 230 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 MTUS1Q9ULD2 1270 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 CES2O00748 559 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 PLA2G4BP0C869 781 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 ATP5DP30049 168 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 FNTAP49354 379 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 ATP11AP98196 1134 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 PTK2Q05397 1052 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 PPIL2Q13356 520 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 SNAPC2Q13487 334 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 BYSLQ13895 437 aaKnown RBP7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 KCNK18Q7Z418 384 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 UHMK1Q8TAS1 419 aaKnown RBP7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 ACTRT1Q8TDG2 376 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 NSUN6Q8TEA1 469 aaKnown RBP7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 LENG9Q96B70 501 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 ELAC2Q9BQ52 826 aaKnown RBP7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 TRIM6Q9C030 488 aaPredicted RBP7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 ASCC2Q9H1I8 757 aaPredicted RBP7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 GBA2Q9HCG7 927 aaPredicted RBP7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 KCNH7Q9NS40 1196 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 SBF1O95248 1867 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 RBAK-RBAKDNI3L0D1 243 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 SORBS3O60504 671 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 MED24O75448 989 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 NR3C2P08235 984 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 ITGB5P18084 799 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 GBP1P32455 592 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 OAZ1P54368 228 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 CETN1Q12798 172 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 TRADDQ15628 312 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 LRRC55Q6ZSA7 311 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 CATSPER3Q86XQ3 398 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 METTL13Q8N6R0 699 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 CCHCR1Q8TD31 782 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 CRYGNQ8WXF5 182 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 MBOAT7Q96N66 472 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 EIF2AK1Q9BQI3 630 aaKnown RBP7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 PDCD2LQ9BRP1 358 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 BLOC1S4Q9NUP1 217 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 SMCHD1A6NHR9 2005 aa7.5□□□□□ -1.21
SRGAP3-213ENST00000618999 PMS2P54278 862 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 PPP2R5AQ15172 486 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 ECM1Q16610 540 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 CAPN12Q6ZSI9 719 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 STXBP4Q6ZWJ1 553 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 MIER3Q7Z3K6 550 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 MGARPQ8TDB4 240 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 TRIM7Q9C029 511 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 MAP3K20Q9NYL2 800 aaKnown RBP7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 GCNT4Q9P109 453 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 CTTNBP2NLQ9P2B4 639 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 IGLV3-22A0A075B6J6 115 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 A0A0G2JLL6 359 aaPredicted RBP7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 GSTTP1A0A1W2PQM5 241 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 CFAP73A6NFT4 308 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 CCT8L1PA6NM43 557 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 GFPT2O94808 682 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 SUN1O94901 812 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 GCNT3O95395 438 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 UCHL3P15374 230 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 CCND2P30279 289 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 GCKP35557 465 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 ADCY2Q08462 1091 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 MYO1EQ12965 1108 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 PGM5Q15124 567 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 TKFCQ3LXA3 575 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 OXLD1Q5BKU9 147 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 C6orf118Q5T5N4 469 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 HGSNATQ68CP4 663 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 LBX2Q6XYB7 198 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 HS2ST1Q7LGA3 356 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 PRRT2Q7Z6L0 340 aaPredicted RBP7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 NLRX1Q86UT6 975 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 CCDC105Q8IYK2 499 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 PIGOQ8TEQ8 1089 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 LRRC15Q8TF66 581 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 DYDC2Q96IM9 177 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 PLVAPQ9BX97 442 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms