RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 SIGIRRQ6IA17 410 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 CCDC62Q6P9F0 684 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 DTHD1Q6ZMT9 781 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 DBX2Q6ZNG2 339 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 ARHGAP27Q6ZUM4 889 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 C11orf57Q6ZUT1 292 aaPredicted RBP3.77□□□□□ -1.81
SMC5-204ENST00000618375 UNC13DQ70J99 1090 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 ZNF765Q7L2R6 523 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 ZNF572Q7Z3I7 529 aaPredicted RBP3.77□□□□□ -1.81
SMC5-204ENST00000618375 HDGFL2Q7Z4V5 671 aaPredicted RBP3.77□□□□□ -1.81
SMC5-204ENST00000618375 VPS36Q86VN1 386 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 DDX42Q86XP3 938 aaKnown RBP eCLIP3.77□□□□□ -1.81
SMC5-204ENST00000618375 MCF2L2Q86YR7 1114 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 RELL1Q8IUW5 271 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 MAP7D3Q8IWC1 876 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 CCDC83Q8IWF9 413 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 SCUBE1Q8IWY4 988 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 ABI1Q8IZP0 508 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 SPICE1Q8N0Z3 855 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 NUP93Q8N1F7 819 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 MREGQ8N565 214 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 ZNF713Q8N859 430 aaPredicted RBP3.77□□□□□ -1.81
SMC5-204ENST00000618375 ENDOVQ8N8Q3 282 aaKnown RBP3.77□□□□□ -1.81
SMC5-204ENST00000618375 TNIP2Q8NFZ5 429 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 FNDC8Q8TC99 324 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 PEX13Q92968 403 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 ANKRD36BP1Q96IX9 119 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 UROC1Q96N76 676 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 GPR101Q96P66 508 aaPredicted RBP3.77□□□□□ -1.81
SMC5-204ENST00000618375 RPS6KC1Q96S38 1066 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 NAPGQ99747 312 aaPredicted RBP3.77□□□□□ -1.81
SMC5-204ENST00000618375 SLF1Q9BQI6 1058 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 FAM167BQ9BTA0 163 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 CENPOQ9BU64 300 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 FTOQ9C0B1 505 aaKnown RBP eCLIP3.77□□□□□ -1.81
SMC5-204ENST00000618375 ZC3H12CQ9C0D7 883 aaKnown RBP3.77□□□□□ -1.81
SMC5-204ENST00000618375 NIF3L1Q9GZT8 377 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 CNNM2Q9H8M5 875 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 RNPEPL1Q9HAU8 725 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 AASDHPPTQ9NRN7 309 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 FAM105AQ9NUU6 356 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 DACT1Q9NYF0 836 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.77□□□□□ -1.81
SMC5-204ENST00000618375 DLGAP2Q9P1A6 1054 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 HSFX1Q9UBD0 423 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 ZNHIT2Q9UHR6 403 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 GPN3Q9UHW5 284 aaPredicted RBP3.77□□□□□ -1.81
SMC5-204ENST00000618375 ATPIF1Q9UII2 106 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 TTF2Q9UNY4 1162 aaKnown RBP3.77□□□□□ -1.81
SMC5-204ENST00000618375 MTMR6Q9Y217 621 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 LRRIQ1Q96JM4 1722 aa3.77□□□□□ -1.81
SMC5-204ENST00000618375 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.76□□□□□ -1.81
SMC5-204ENST00000618375 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 ST20-MTHFSA0A0A6YYL1 179 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 VPS37CA5D8V6 355 aaPredicted RBP3.76□□□□□ -1.81
SMC5-204ENST00000618375 CCT8L1PA6NM43 557 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 KIF28PB7ZC32 967 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 GOLGA8MH3BSY2 632 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 EIF1AYO14602 144 aaKnown RBP3.76□□□□□ -1.81
SMC5-204ENST00000618375 APAF1O14727 1248 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 RNGTTO60942 597 aaKnown RBP3.76□□□□□ -1.81
SMC5-204ENST00000618375 AOC2O75106 756 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 GLRX3O76003 335 aaKnown RBP3.76□□□□□ -1.81
SMC5-204ENST00000618375 TJP3O95049 919 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 B3GALT4O96024 378 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 S100A6P06703 90 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 CTSBP07858 339 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 PABPC4LP0CB38 370 aaKnown RBP3.76□□□□□ -1.81
SMC5-204ENST00000618375 PYGMP11217 842 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 PIM1P11309 404 aaPredicted RBP3.76□□□□□ -1.81
SMC5-204ENST00000618375 PCP11498 1178 aaKnown RBP3.76□□□□□ -1.81
SMC5-204ENST00000618375 ALAS1P13196 640 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 TRIM27P14373 513 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 TCF3P15923 654 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 YBX3P16989 372 aaKnown RBP eCLIP3.76□□□□□ -1.81
SMC5-204ENST00000618375 CTRB1P17538 263 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 PDCP20941 246 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 KCNA3P22001 575 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 SERPINB6P35237 376 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 DSTNP60981 165 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 AMPD2Q01433 879 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 OCRLQ01968 901 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 KIF23Q02241 960 aaPredicted RBP3.76□□□□□ -1.81
SMC5-204ENST00000618375 RELAQ04206 551 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 MCL1Q07820 350 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 NIPAL4Q0D2K0 466 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 TBL3Q12788 808 aaKnown RBP3.76□□□□□ -1.81
SMC5-204ENST00000618375 NMIQ13287 307 aaPredicted RBP3.76□□□□□ -1.81
SMC5-204ENST00000618375 DCTN2Q13561 401 aaKnown RBP3.76□□□□□ -1.81
SMC5-204ENST00000618375 KCTD2Q14681 263 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 NR1D2Q14995 579 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 PPP2R5BQ15173 497 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 INSCQ1MX18 579 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 SHROOM1Q2M3G4 852 aaPredicted RBP3.76□□□□□ -1.81
SMC5-204ENST00000618375 CYP27C1Q4G0S4 372 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 TTMPQ5BVD1 217 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 WDR45BQ5MNZ6 344 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 C10orf76Q5T2E6 689 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 CYP4A22Q5TCH4 519 aa3.76□□□□□ -1.81
SMC5-204ENST00000618375 EFCAB2Q5VUJ9 269 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms