RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 WNT7AO00755 349 aa14.81□□□□□ -0.04
CIITA-213ENST00000618327 MYBL1P10243 752 aa14.81□□□□□ -0.04
CIITA-213ENST00000618327 ARL1P40616 181 aaPredicted RBP14.81□□□□□ -0.04
CIITA-213ENST00000618327 CLCN3P51790 818 aa14.81□□□□□ -0.04
CIITA-213ENST00000618327 RBP5P82980 135 aa14.81□□□□□ -0.04
CIITA-213ENST00000618327 CTAGE3PQ8IX95 158 aa14.81□□□□□ -0.04
CIITA-213ENST00000618327 P3H4Q92791 437 aa14.81□□□□□ -0.04
CIITA-213ENST00000618327 ZWILCHQ9H900 591 aa14.81□□□□□ -0.04
CIITA-213ENST00000618327 NHSL1Q5SYE7 1610 aa14.81□□□□□ -0.04
CIITA-213ENST00000618327 PPP1R11O60927 126 aaPredicted RBP14.81□□□□□ -0.04
CIITA-213ENST00000618327 RTN2O75298 545 aa14.81□□□□□ -0.04
CIITA-213ENST00000618327 SLC7A5Q01650 507 aa14.81□□□□□ -0.04
CIITA-213ENST00000618327 CBWD2Q8IUF1 395 aa14.81□□□□□ -0.04
CIITA-213ENST00000618327 THEM5Q8N1Q8 247 aa14.81□□□□□ -0.04
CIITA-213ENST00000618327 UHMK1Q8TAS1 419 aaKnown RBP14.81□□□□□ -0.04
CIITA-213ENST00000618327 DNAJC18Q9H819 358 aa14.81□□□□□ -0.04
CIITA-213ENST00000618327 CYP39A1Q9NYL5 469 aa14.81□□□□□ -0.04
CIITA-213ENST00000618327 PLIN4Q96Q06 1357 aa14.81□□□□□ -0.04
CIITA-213ENST00000618327 PSMD10O75832 226 aa14.81□□□□□ -0.04
CIITA-213ENST00000618327 PSMC1P62191 440 aaKnown RBP14.81□□□□□ -0.04
CIITA-213ENST00000618327 IRX5P78411 483 aaPredicted RBP14.81□□□□□ -0.04
CIITA-213ENST00000618327 DR1Q01658 176 aa14.81□□□□□ -0.04
CIITA-213ENST00000618327 PPARDQ03181 441 aa14.81□□□□□ -0.04
CIITA-213ENST00000618327 TSNAXIP1Q2TAA8 658 aa14.81□□□□□ -0.04
CIITA-213ENST00000618327 SYN2Q92777 582 aaPredicted RBP14.81□□□□□ -0.04
CIITA-213ENST00000618327 PLAGL2Q9UPG8 496 aa14.81□□□□□ -0.04
CIITA-213ENST00000618327 NID2Q14112 1375 aa14.81□□□□□ -0.04
CIITA-213ENST00000618327 IGKV6D-41A0A0C4DH26 115 aa14.81□□□□□ -0.04
CIITA-213ENST00000618327 NFKBIEO00221 500 aa14.81□□□□□ -0.04
CIITA-213ENST00000618327 IL18RAPO95256 599 aa14.81□□□□□ -0.04
CIITA-213ENST00000618327 PHBP35232 272 aa14.81□□□□□ -0.04
CIITA-213ENST00000618327 LAMB4A4D0S4 1761 aa14.81□□□□□ -0.04
CIITA-213ENST00000618327 AKAP3O75969 853 aa14.8□□□□□ -0.04
CIITA-213ENST00000618327 ATP1A1P05023 1023 aaKnown RBP14.8□□□□□ -0.04
CIITA-213ENST00000618327 GALCP54803 685 aa14.8□□□□□ -0.04
CIITA-213ENST00000618327 SLC12A3P55017 1021 aa14.8□□□□□ -0.04
CIITA-213ENST00000618327 CAPN12Q6ZSI9 719 aa14.8□□□□□ -0.04
CIITA-213ENST00000618327 MOB2Q70IA6 237 aa14.8□□□□□ -0.04
CIITA-213ENST00000618327 CDR2LQ86X02 465 aaPredicted RBP14.8□□□□□ -0.04
CIITA-213ENST00000618327 AFG1LQ8WV93 481 aa14.8□□□□□ -0.04
CIITA-213ENST00000618327 LCMT1Q9UIC8 334 aa14.8□□□□□ -0.04
CIITA-213ENST00000618327 PACSIN2Q9UNF0 486 aaPredicted RBP14.8□□□□□ -0.04
CIITA-213ENST00000618327 FRMPD4Q14CM0 1322 aa14.8□□□□□ -0.04
CIITA-213ENST00000618327 MANSC4A6NHS7 340 aaPredicted RBP14.8□□□□□ -0.04
CIITA-213ENST00000618327 ZBTB39O15060 712 aa14.8□□□□□ -0.04
CIITA-213ENST00000618327 NKX2-3Q8TAU0 364 aa14.8□□□□□ -0.04
CIITA-213ENST00000618327 SPDYE16A6NNV3 312 aaPredicted RBP14.8□□□□□ -0.04
CIITA-213ENST00000618327 ADORA2AP29274 412 aa14.8□□□□□ -0.04
CIITA-213ENST00000618327 NOP14P78316 857 aaKnown RBP14.8□□□□□ -0.04
CIITA-213ENST00000618327 TMEM132BQ14DG7 1078 aa14.8□□□□□ -0.04
CIITA-213ENST00000618327 CCDC38Q502W7 563 aa14.8□□□□□ -0.04
CIITA-213ENST00000618327 BAIAP2L1Q9UHR4 511 aa14.8□□□□□ -0.04
CIITA-213ENST00000618327 MYPNQ86TC9 1320 aa14.8□□□□□ -0.04
CIITA-213ENST00000618327 CIB2O75838 187 aa14.8□□□□□ -0.04
CIITA-213ENST00000618327 SSTR3P32745 418 aaPredicted RBP14.8□□□□□ -0.04
CIITA-213ENST00000618327 ZNF280AP59817 542 aaPredicted RBP14.8□□□□□ -0.04
CIITA-213ENST00000618327 GJB7Q6PEY0 223 aa14.8□□□□□ -0.04
CIITA-213ENST00000618327 TRIM65Q6PJ69 517 aa14.8□□□□□ -0.04
CIITA-213ENST00000618327 ZNF507Q8TCN5 953 aa14.8□□□□□ -0.04
CIITA-213ENST00000618327 RBM41Q96IZ5 413 aaKnown RBP14.8□□□□□ -0.04
CIITA-213ENST00000618327 VCX3BQ9H321 246 aa14.8□□□□□ -0.04
CIITA-213ENST00000618327 MED4Q9NPJ6 270 aa14.8□□□□□ -0.04
CIITA-213ENST00000618327 HGSO14964 777 aaPredicted RBP14.79□□□□□ -0.04
CIITA-213ENST00000618327 ATP8B1O43520 1251 aa14.79□□□□□ -0.04
CIITA-213ENST00000618327 GARTP22102 1010 aa14.79□□□□□ -0.04
CIITA-213ENST00000618327 KLRC1P26715 233 aa14.79□□□□□ -0.04
CIITA-213ENST00000618327 NAB2Q15742 525 aa14.79□□□□□ -0.04
CIITA-213ENST00000618327 URGCPQ8TCY9 931 aa14.79□□□□□ -0.04
CIITA-213ENST00000618327 ATP8B4Q8TF62 1192 aa14.79□□□□□ -0.04
CIITA-213ENST00000618327 ASNSD1Q9NWL6 643 aa14.79□□□□□ -0.04
CIITA-213ENST00000618327 SNX9Q9Y5X1 595 aa14.79□□□□□ -0.04
CIITA-213ENST00000618327 UBIAD1Q9Y5Z9 338 aa14.79□□□□□ -0.04
CIITA-213ENST00000618327 PON1P27169 355 aa14.79□□□□□ -0.04
CIITA-213ENST00000618327 SOX10P56693 466 aa14.79□□□□□ -0.04
CIITA-213ENST00000618327 MRPS25P82663 173 aaKnown RBP14.79□□□□□ -0.04
CIITA-213ENST00000618327 APBA1Q02410 837 aa14.79□□□□□ -0.04
CIITA-213ENST00000618327 FIGNQ5HY92 759 aa14.79□□□□□ -0.04
CIITA-213ENST00000618327 RBBP8NLQ8NC74 664 aaPredicted RBP14.79□□□□□ -0.04
CIITA-213ENST00000618327 NCAPGQ9BPX3 1015 aa14.79□□□□□ -0.04
CIITA-213ENST00000618327 PI4K2AQ9BTU6 479 aa14.79□□□□□ -0.04
CIITA-213ENST00000618327 TMEM150BA6NC51 233 aa14.79□□□□□ -0.04
CIITA-213ENST00000618327 OGTO15294 1046 aa14.79□□□□□ -0.04
CIITA-213ENST00000618327 RPS6KA5O75582 802 aa14.79□□□□□ -0.04
CIITA-213ENST00000618327 CLTAP09496 248 aa14.79□□□□□ -0.04
CIITA-213ENST00000618327 MAPTP10636 758 aaKnown RBP14.79□□□□□ -0.04
CIITA-213ENST00000618327 CLCN6P51797 869 aa14.79□□□□□ -0.04
CIITA-213ENST00000618327 TSPY1Q01534 308 aa14.79□□□□□ -0.04
CIITA-213ENST00000618327 CCNYQ8ND76 341 aa14.79□□□□□ -0.04
CIITA-213ENST00000618327 MORC4Q8TE76 937 aa14.79□□□□□ -0.04
CIITA-213ENST00000618327 RNF139Q8WU17 664 aa14.79□□□□□ -0.04
CIITA-213ENST00000618327 HSPH1Q92598 858 aa14.79□□□□□ -0.04
CIITA-213ENST00000618327 TRAF3IP3Q9Y228 551 aa14.79□□□□□ -0.04
CIITA-213ENST00000618327 MRFAP1Q9Y605 127 aa14.79□□□□□ -0.04
CIITA-213ENST00000618327 GOLGA8KD6RF30 607 aa14.78□□□□□ -0.04
CIITA-213ENST00000618327 TPD52P55327 224 aaPredicted RBP14.78□□□□□ -0.04
CIITA-213ENST00000618327 GLE1Q53GS7 698 aaKnown RBP14.78□□□□□ -0.04
CIITA-213ENST00000618327 CFAP157Q5JU67 520 aa14.78□□□□□ -0.04
CIITA-213ENST00000618327 DARS2Q6PI48 645 aaKnown RBP14.78□□□□□ -0.04
CIITA-213ENST00000618327 DNAJC7Q99615 494 aa14.78□□□□□ -0.04
CIITA-213ENST00000618327 TRIM10Q9UDY6 481 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms