RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 ELF2Q15723 593 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 CDR2LQ86X02 465 aaPredicted RBP11.65□□□□□ -0.54
POLR2A-209ENST00000617998 ATP8B4Q8TF62 1192 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 IQCDQ96DY2 449 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 MAGEB10Q96LZ2 347 aaPredicted RBP11.65□□□□□ -0.54
POLR2A-209ENST00000617998 FDXACB1Q9BRP7 624 aaPredicted RBP11.65□□□□□ -0.54
POLR2A-209ENST00000617998 CYP26B1Q9NR63 512 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 FAM200BP0CF97 657 aa11.65□□□□□ -0.55
POLR2A-209ENST00000617998 PSMA2P25787 234 aa11.65□□□□□ -0.55
POLR2A-209ENST00000617998 MTX1Q13505 466 aa11.65□□□□□ -0.55
POLR2A-209ENST00000617998 NOMO2Q5JPE7 1267 aa11.65□□□□□ -0.55
POLR2A-209ENST00000617998 TAS2R42Q7RTR8 314 aa11.65□□□□□ -0.55
POLR2A-209ENST00000617998 CPB2Q96IY4 423 aa11.65□□□□□ -0.55
POLR2A-209ENST00000617998 INSL6Q9Y581 213 aa11.65□□□□□ -0.55
POLR2A-209ENST00000617998 CYP2C18P33260 490 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 FKBP3Q00688 224 aaKnown RBP11.64□□□□□ -0.55
POLR2A-209ENST00000617998 HSPH1Q92598 858 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 FOPNLQ96NB1 174 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 SF3B1O75533 1304 aaKnown RBP eCLIP11.64□□□□□ -0.551e-6■■■■■ 86.2
POLR2A-209ENST00000617998 AKR1B15C9JRZ8 316 aaPredicted RBP11.64□□□□□ -0.55
POLR2A-209ENST00000617998 ONECUT3O60422 494 aaPredicted RBP11.64□□□□□ -0.55
POLR2A-209ENST00000617998 LGALS2P05162 132 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 SLC10A3P09131 477 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 PTK2BQ14289 1009 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 ZC3H14Q6PJT7 736 aaKnown RBP11.64□□□□□ -0.55
POLR2A-209ENST00000617998 FBXO18Q8NFZ0 1043 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.64□□□□□ -0.55
POLR2A-209ENST00000617998 C1QTNF7Q9BXJ2 289 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 HACD3Q9P035 362 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 MED1Q15648 1581 aaPredicted RBP11.64□□□□□ -0.55
POLR2A-209ENST00000617998 DFFAO00273 331 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 PRR29P0C7W0 189 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 ORC2Q13416 577 aaPredicted RBP11.64□□□□□ -0.55
POLR2A-209ENST00000617998 TEAD4Q15561 434 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 NOL9Q5SY16 702 aaKnown RBP11.64□□□□□ -0.55
POLR2A-209ENST00000617998 FAM173BQ6P4H8 233 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 CD302Q8IX05 232 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 ATP6V0D2Q8N8Y2 350 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 SYTL5Q8TDW5 730 aaPredicted RBP11.64□□□□□ -0.55
POLR2A-209ENST00000617998 MTA3Q9BTC8 594 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 PLEKHA5Q9HAU0 1116 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 ZSWIM6Q9HCJ5 1215 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 GCNT4Q9P109 453 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 AGRPO00253 132 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 ACOT2P49753 483 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 INAVAQ3KP66 663 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 CYB5R4Q7L1T6 521 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 CDK5RAP1Q96SZ6 601 aaKnown RBP11.64□□□□□ -0.55
POLR2A-209ENST00000617998 EPAS1Q99814 870 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 AMFRQ9UKV5 643 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 TRAV19A0A0A6YYK7 116 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 MCF2LO15068 1137 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 NPM3O75607 178 aaKnown RBP11.64□□□□□ -0.55
POLR2A-209ENST00000617998 RALBP11234 206 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 AXLP30530 894 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 THOP1P52888 689 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 MORC3Q14149 939 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 OVOS1Q6IE37 1185 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 VPS52Q8N1B4 723 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 SPATA18Q8TC71 538 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 CLIC6Q96NY7 704 aa11.64□□□□□ -0.55
POLR2A-209ENST00000617998 GNSP15586 552 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 MED15Q96RN5 788 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 ASNSD1Q9NWL6 643 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 PNOCQ13519 176 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 OTOP3Q7RTS5 596 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 HELQQ8TDG4 1101 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 RICTORQ6R327 1708 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 ACTN4O43707 911 aaKnown RBP11.63□□□□□ -0.55
POLR2A-209ENST00000617998 ASS1P00966 412 aaKnown RBP11.63□□□□□ -0.55
POLR2A-209ENST00000617998 KCNA5P22460 613 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 GIT2Q14161 759 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 MIB1Q86YT6 1006 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 PPP1R13LQ8WUF5 828 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 TCF25Q9BQ70 676 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 A1CFQ9NQ94 594 aaKnown RBP11.63□□□□□ -0.55
POLR2A-209ENST00000617998 SMIM23A6NLE4 172 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 KIAA0754O94854 1291 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 CFIP05156 583 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 STILQ15468 1287 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 TYW1BQ6NUM6 668 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 MSL3Q8N5Y2 521 aaKnown RBP11.63□□□□□ -0.55
POLR2A-209ENST00000617998 BRI3BPQ8WY22 251 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 CEP63Q96MT8 703 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 CENPKQ9BS16 269 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 ANKEF1Q9NU02 776 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 LTBP3Q9NS15 1303 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 TBC1D12O60347 775 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 CD52P31358 61 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 TWF1Q12792 350 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 RABGAP1LQ5R372 815 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 SYCP2LQ5T4T6 812 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 FAM43AQ8N2R8 423 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 CPA6Q8N4T0 437 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 MCUQ8NE86 351 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 KIF18AQ8NI77 898 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 CCHCR1Q8TD31 782 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 CDKL2Q92772 493 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 ERLEC1Q96DZ1 483 aa11.63□□□□□ -0.55
POLR2A-209ENST00000617998 DPP3Q9NY33 737 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms