RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, human

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-228	ENST00000617771	RARS2	Q5T160	578 aa	Known RBP	27.72	■■■□□ 2.03
VEGFA-228	ENST00000617771	FUT10	Q6P4F1	479 aa		27.72	■■■□□ 2.03
VEGFA-228	ENST00000617771	TAS1R1	Q7RTX1	841 aa		27.72	■■■□□ 2.03
VEGFA-228	ENST00000617771	CALML4	Q96GE6	196 aa		27.72	■■■□□ 2.03
VEGFA-228	ENST00000617771	MRPL4	Q9BYD3	311 aa	Known RBP	27.72	■■■□□ 2.03
VEGFA-228	ENST00000617771	ADAM28	Q9UKQ2	775 aa		27.72	■■■□□ 2.03
VEGFA-228	ENST00000617771	GDA	Q9Y2T3	454 aa		27.72	■■■□□ 2.03
VEGFA-228	ENST00000617771	SPDYE4	A6NLX3	237 aa		27.71	■■■□□ 2.03
VEGFA-228	ENST00000617771	PRR33	A8MZF0	331 aa		27.71	■■■□□ 2.03
VEGFA-228	ENST00000617771		F8W810	466 aa		27.71	■■■□□ 2.03
VEGFA-228	ENST00000617771	PLA2G4B	P0C869	781 aa		27.71	■■■□□ 2.03
VEGFA-228	ENST00000617771	CLCN4	P51793	760 aa		27.71	■■■□□ 2.03
VEGFA-228	ENST00000617771	SLC12A3	P55017	1021 aa		27.71	■■■□□ 2.03
VEGFA-228	ENST00000617771	DSG1	Q02413	1049 aa		27.71	■■■□□ 2.03
VEGFA-228	ENST00000617771	HSP90AA2P	Q14568	343 aa	Predicted RBP	27.71	■■■□□ 2.03
VEGFA-228	ENST00000617771	FBXL18	Q96ME1	805 aa		27.71	■■■□□ 2.03
VEGFA-228	ENST00000617771	NR2E1	Q9Y466	385 aa		27.71	■■■□□ 2.03
VEGFA-228	ENST00000617771	PTGES	O14684	152 aa		27.7	■■■□□ 2.02
VEGFA-228	ENST00000617771	TADA2A	O75478	443 aa		27.7	■■■□□ 2.02
VEGFA-228	ENST00000617771	ADH1A	P07327	375 aa		27.7	■■■□□ 2.02
VEGFA-228	ENST00000617771	LONP1	P36776	959 aa	Known RBP	27.7	■■■□□ 2.02
VEGFA-228	ENST00000617771	SMTN	P53814	917 aa		27.7	■■■□□ 2.02
VEGFA-228	ENST00000617771	RAD51AP2	Q09MP3	1159 aa		27.7	■■■□□ 2.02
VEGFA-228	ENST00000617771	SF3A1	Q15459	793 aa	Known RBP	27.7	■■■□□ 2.02
VEGFA-228	ENST00000617771	KIAA0319	Q5VV43	1072 aa		27.7	■■■□□ 2.02
VEGFA-228	ENST00000617771	C12orf76	Q8N812	135 aa	Predicted RBP	27.7	■■■□□ 2.02
VEGFA-228	ENST00000617771	ACO2	Q99798	780 aa	Known RBP	27.7	■■■□□ 2.02
VEGFA-228	ENST00000617771	SFXN1	Q9H9B4	322 aa		27.7	■■■□□ 2.02
VEGFA-228	ENST00000617771	CHST7	Q9NS84	486 aa		27.7	■■■□□ 2.02
VEGFA-228	ENST00000617771	PLS3	P13797	630 aa		27.69	■■■□□ 2.02
VEGFA-228	ENST00000617771	USP41	Q3LFD5	358 aa		27.69	■■■□□ 2.02
VEGFA-228	ENST00000617771	ZNF568	Q3ZCX4	644 aa		27.69	■■■□□ 2.02
VEGFA-228	ENST00000617771	ATAT1	Q5SQI0	421 aa		27.69	■■■□□ 2.02
VEGFA-228	ENST00000617771	SPIRE2	Q8WWL2	714 aa		27.69	■■■□□ 2.02
VEGFA-228	ENST00000617771	INTS4	Q96HW7	963 aa	Known RBP	27.69	■■■□□ 2.02
VEGFA-228	ENST00000617771	NTPCR	Q9BSD7	190 aa	Known RBP	27.69	■■■□□ 2.02
VEGFA-228	ENST00000617771	RXFP1	Q9HBX9	757 aa		27.69	■■■□□ 2.02
VEGFA-228	ENST00000617771	DPP7	Q9UHL4	492 aa		27.69	■■■□□ 2.02
VEGFA-228	ENST00000617771	SF3B1	O75533	1304 aa	Known RBP eCLIP	27.68	■■■□□ 2.02	6e-7	■■■■■ 31.1
VEGFA-228	ENST00000617771	CASTOR2	A6NHX0	329 aa		27.68	■■■□□ 2.02
VEGFA-228	ENST00000617771	SFI1	A8K8P3	1242 aa		27.68	■■■□□ 2.02
VEGFA-228	ENST00000617771	SLC16A4	O15374	487 aa		27.68	■■■□□ 2.02
VEGFA-228	ENST00000617771	ELMSAN1	Q6PJG2	1045 aa		27.68	■■■□□ 2.02
VEGFA-228	ENST00000617771	TAS1R3	Q7RTX0	852 aa		27.68	■■■□□ 2.02
VEGFA-228	ENST00000617771	GPR65	Q8IYL9	337 aa		27.68	■■■□□ 2.02
VEGFA-228	ENST00000617771	RABGGTA	Q92696	567 aa		27.68	■■■□□ 2.02
VEGFA-228	ENST00000617771	GPR62	Q9BZJ7	368 aa		27.68	■■■□□ 2.02
VEGFA-228	ENST00000617771	POMK	Q9H5K3	350 aa		27.68	■■■□□ 2.02
VEGFA-228	ENST00000617771	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	27.68	■■■□□ 2.02
VEGFA-228	ENST00000617771	CDH22	Q9UJ99	828 aa		27.68	■■■□□ 2.02
VEGFA-228	ENST00000617771	TEX28	O15482	410 aa		27.67	■■■□□ 2.02
VEGFA-228	ENST00000617771	YARS	P54577	528 aa	Known RBP	27.67	■■■□□ 2.02
VEGFA-228	ENST00000617771	CREM	Q03060	361 aa		27.67	■■■□□ 2.02
VEGFA-228	ENST00000617771	STRN3	Q13033	797 aa		27.67	■■■□□ 2.02
VEGFA-228	ENST00000617771	RASSF8	Q8NHQ8	419 aa		27.67	■■■□□ 2.02
VEGFA-228	ENST00000617771	PAAF1	Q9BRP4	392 aa		27.67	■■■□□ 2.02
VEGFA-228	ENST00000617771	CCDC94	Q9BW85	323 aa	Predicted RBP	27.67	■■■□□ 2.02
VEGFA-228	ENST00000617771	TARS2	Q9BW92	718 aa	Known RBP	27.67	■■■□□ 2.02
VEGFA-228	ENST00000617771	CDT1	Q9H211	546 aa		27.67	■■■□□ 2.02
VEGFA-228	ENST00000617771	TSHZ2	Q9NRE2	1034 aa		27.67	■■■□□ 2.02
VEGFA-228	ENST00000617771	TOPORS	Q9NS56	1045 aa	Predicted RBP	27.67	■■■□□ 2.02
VEGFA-228	ENST00000617771	CACNG4	Q9UBN1	327 aa		27.67	■■■□□ 2.02
VEGFA-228	ENST00000617771	RAPGEFL1	Q9UHV5	662 aa		27.67	■■■□□ 2.02
VEGFA-228	ENST00000617771	HCN4	Q9Y3Q4	1203 aa		27.67	■■■□□ 2.02
VEGFA-228	ENST00000617771	SYT1	P21579	422 aa		27.66	■■■□□ 2.02
VEGFA-228	ENST00000617771	GRM5	P41594	1212 aa		27.66	■■■□□ 2.02
VEGFA-228	ENST00000617771	NAB2	Q15742	525 aa		27.66	■■■□□ 2.02
VEGFA-228	ENST00000617771	TMC5	Q6UXY8	1006 aa		27.66	■■■□□ 2.02
VEGFA-228	ENST00000617771	EDA	Q92838	391 aa		27.66	■■■□□ 2.02
VEGFA-228	ENST00000617771	TCHP	Q9BT92	498 aa		27.66	■■■□□ 2.02
VEGFA-228	ENST00000617771	PTPRH	Q9HD43	1115 aa		27.66	■■■□□ 2.02
VEGFA-228	ENST00000617771	LARS	Q9P2J5	1176 aa	Known RBP	27.66	■■■□□ 2.02
VEGFA-228	ENST00000617771		H0YCG3	227 aa		27.65	■■■□□ 2.02
VEGFA-228	ENST00000617771		K7ELQ4	463 aa	Predicted RBP	27.65	■■■□□ 2.02
VEGFA-228	ENST00000617771	GLUD1	P00367	558 aa		27.65	■■■□□ 2.02
VEGFA-228	ENST00000617771	WEE2	P0C1S8	567 aa		27.65	■■■□□ 2.02
VEGFA-228	ENST00000617771	SP100	P23497	879 aa	Predicted RBP	27.65	■■■□□ 2.02
VEGFA-228	ENST00000617771	KANK3	Q6NY19	840 aa		27.65	■■■□□ 2.02
VEGFA-228	ENST00000617771	MPZL3	Q6UWV2	235 aa		27.65	■■■□□ 2.02
VEGFA-228	ENST00000617771	TMEM161B	Q8NDZ6	487 aa		27.65	■■■□□ 2.02
VEGFA-228	ENST00000617771	RIN2	Q8WYP3	895 aa	Predicted RBP	27.65	■■■□□ 2.02
VEGFA-228	ENST00000617771	B3GALT6	Q96L58	329 aa		27.65	■■■□□ 2.02
VEGFA-228	ENST00000617771	CXCL16	Q9H2A7	254 aa		27.65	■■■□□ 2.02
VEGFA-228	ENST00000617771	MAN1C1	Q9NR34	630 aa		27.65	■■■□□ 2.02
VEGFA-228	ENST00000617771	FNIP2	Q9P278	1114 aa		27.65	■■■□□ 2.02
VEGFA-228	ENST00000617771	ODF2L	Q9ULJ1	636 aa		27.65	■■■□□ 2.02
VEGFA-228	ENST00000617771	KIF4A	O95239	1232 aa		27.64	■■■□□ 2.02
VEGFA-228	ENST00000617771	C1R	P00736	705 aa		27.64	■■■□□ 2.02
VEGFA-228	ENST00000617771	MCF2	P10911	925 aa		27.64	■■■□□ 2.02
VEGFA-228	ENST00000617771	PROZ	P22891	400 aa		27.64	■■■□□ 2.02
VEGFA-228	ENST00000617771	GRIN1	Q05586	938 aa		27.64	■■■□□ 2.02
VEGFA-228	ENST00000617771	ELAVL2	Q12926	359 aa	Known RBP	27.64	■■■□□ 2.02
VEGFA-228	ENST00000617771	ARSH	Q5FYA8	562 aa		27.64	■■■□□ 2.02
VEGFA-228	ENST00000617771	GPR149	Q86SP6	731 aa		27.64	■■■□□ 2.02
VEGFA-228	ENST00000617771	ZBTB33	Q86T24	672 aa		27.64	■■■□□ 2.02
VEGFA-228	ENST00000617771	GPBP1	Q86WP2	473 aa		27.64	■■■□□ 2.02
VEGFA-228	ENST00000617771	HASPIN	Q8TF76	798 aa		27.64	■■■□□ 2.02
VEGFA-228	ENST00000617771	PPP1R10	Q96QC0	940 aa	Known RBP	27.64	■■■□□ 2.02
VEGFA-228	ENST00000617771	NPHP3-ACAD11	A0A0J9YXS1	232 aa		27.63	■■■□□ 2.01
VEGFA-228	ENST00000617771	MAPT	P10636	758 aa	Known RBP	27.63	■■■□□ 2.01

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