RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 DMAC2Q9NW81 257 aa17.03■□□□□ 0.32
PCDHGC3-204ENST00000617222 RNF216Q9NWF9 866 aaPredicted RBP17.03■□□□□ 0.32
PCDHGC3-204ENST00000617222 KLK14Q9P0G3 267 aa17.03■□□□□ 0.32
PCDHGC3-204ENST00000617222 RWDD2AQ9UIY3 292 aa17.03■□□□□ 0.32
PCDHGC3-204ENST00000617222 PDE4DIPQ5VU43 2346 aa17.03■□□□□ 0.32
PCDHGC3-204ENST00000617222 BICDL2A1A5D9 508 aa17.02■□□□□ 0.32
PCDHGC3-204ENST00000617222 TULP1O00294 542 aaPredicted RBP17.02■□□□□ 0.32
PCDHGC3-204ENST00000617222 FAM189A1O60320 539 aa17.02■□□□□ 0.32
PCDHGC3-204ENST00000617222 EXOC3O60645 756 aa17.02■□□□□ 0.32
PCDHGC3-204ENST00000617222 RECQL4O94761 1208 aa17.02■□□□□ 0.32
PCDHGC3-204ENST00000617222 CLTAP09496 248 aa17.02■□□□□ 0.32
PCDHGC3-204ENST00000617222 FGFR1P11362 822 aa17.02■□□□□ 0.32
PCDHGC3-204ENST00000617222 RPL13P26373 211 aaKnown RBP17.02■□□□□ 0.32
PCDHGC3-204ENST00000617222 LRRC63Q05C16 580 aa17.02■□□□□ 0.32
PCDHGC3-204ENST00000617222 NFIL3Q16649 462 aa17.02■□□□□ 0.32
PCDHGC3-204ENST00000617222 KYAT1Q16773 422 aa17.02■□□□□ 0.32
PCDHGC3-204ENST00000617222 EDRF1Q3B7T1 1238 aa17.02■□□□□ 0.32
PCDHGC3-204ENST00000617222 TTI2Q6NXR4 508 aa17.02■□□□□ 0.32
PCDHGC3-204ENST00000617222 CRELD2Q6UXH1 353 aaPredicted RBP17.02■□□□□ 0.32
PCDHGC3-204ENST00000617222 C11orf57Q6ZUT1 292 aaPredicted RBP17.02■□□□□ 0.32
PCDHGC3-204ENST00000617222 SLC9A9Q8IVB4 645 aa17.02■□□□□ 0.32
PCDHGC3-204ENST00000617222 GPD1LQ8N335 351 aa17.02■□□□□ 0.32
PCDHGC3-204ENST00000617222 RDH13Q8NBN7 331 aa17.02■□□□□ 0.32
PCDHGC3-204ENST00000617222 PHOSPHO2Q8TCD6 241 aa17.02■□□□□ 0.32
PCDHGC3-204ENST00000617222 MED15Q96RN5 788 aa17.02■□□□□ 0.32
PCDHGC3-204ENST00000617222 DNAJC25Q9H1X3 360 aa17.02■□□□□ 0.32
PCDHGC3-204ENST00000617222 RNF19AQ9NV58 838 aa17.02■□□□□ 0.32
PCDHGC3-204ENST00000617222 CPSF3Q9UKF6 684 aaKnown RBP17.02■□□□□ 0.32
PCDHGC3-204ENST00000617222 ATP2A2P16615 1042 aaKnown RBP17.01■□□□□ 0.31
PCDHGC3-204ENST00000617222 NR2F2P24468 414 aa17.01■□□□□ 0.31
PCDHGC3-204ENST00000617222 ERCC5P28715 1186 aaPredicted RBP17.01■□□□□ 0.31
PCDHGC3-204ENST00000617222 GATMP50440 423 aa17.01■□□□□ 0.31
PCDHGC3-204ENST00000617222 YARSP54577 528 aaKnown RBP17.01■□□□□ 0.31
PCDHGC3-204ENST00000617222 MYBPC2Q14324 1141 aa17.01■□□□□ 0.31
PCDHGC3-204ENST00000617222 ANO6Q4KMQ2 910 aa17.01■□□□□ 0.31
PCDHGC3-204ENST00000617222 CT47A1Q5JQC4 288 aaPredicted RBP17.01■□□□□ 0.31
PCDHGC3-204ENST00000617222 CEP135Q66GS9 1140 aa17.01■□□□□ 0.31
PCDHGC3-204ENST00000617222 CBWD2Q8IUF1 395 aa17.01■□□□□ 0.31
PCDHGC3-204ENST00000617222 HELQQ8TDG4 1101 aa17.01■□□□□ 0.31
PCDHGC3-204ENST00000617222 FAM212AQ96EL1 285 aa17.01■□□□□ 0.31
PCDHGC3-204ENST00000617222 EEF2KMTQ96G04 330 aa17.01■□□□□ 0.31
PCDHGC3-204ENST00000617222 SLC9A7Q96T83 725 aa17.01■□□□□ 0.31
PCDHGC3-204ENST00000617222 GAD1Q99259 594 aa17.01■□□□□ 0.31
PCDHGC3-204ENST00000617222 DUSP9Q99956 384 aaKnown RBP17.01■□□□□ 0.31
PCDHGC3-204ENST00000617222 RPF1Q9H9Y2 349 aaKnown RBP17.01■□□□□ 0.31
PCDHGC3-204ENST00000617222 RSAD1Q9HA92 442 aa17.01■□□□□ 0.31
PCDHGC3-204ENST00000617222 UBN1Q9NPG3 1134 aa17.01■□□□□ 0.31
PCDHGC3-204ENST00000617222 GIT1Q9Y2X7 761 aa17.01■□□□□ 0.31
PCDHGC3-204ENST00000617222 ZNF233A6NK53 670 aa17■□□□□ 0.31
PCDHGC3-204ENST00000617222 CETN3O15182 167 aa17■□□□□ 0.31
PCDHGC3-204ENST00000617222 OFD1O75665 1012 aa17■□□□□ 0.31
PCDHGC3-204ENST00000617222 CXCL8P10145 99 aa17■□□□□ 0.31
PCDHGC3-204ENST00000617222 CASP4P49662 377 aa17■□□□□ 0.31
PCDHGC3-204ENST00000617222 FKBP3Q00688 224 aaKnown RBP17■□□□□ 0.31
PCDHGC3-204ENST00000617222 ENOX2Q16206 610 aaKnown RBP17■□□□□ 0.31
PCDHGC3-204ENST00000617222 SLC10A6Q3KNW5 377 aa17■□□□□ 0.31
PCDHGC3-204ENST00000617222 CLLU1OSQ5K130 101 aa17■□□□□ 0.31
PCDHGC3-204ENST00000617222 GLB1LQ6UWU2 654 aa17■□□□□ 0.31
PCDHGC3-204ENST00000617222 HERC6Q8IVU3 1022 aa17■□□□□ 0.31
PCDHGC3-204ENST00000617222 TMEM174Q8WUU8 243 aa17■□□□□ 0.31
PCDHGC3-204ENST00000617222 FBXL18Q96ME1 805 aa17■□□□□ 0.31
PCDHGC3-204ENST00000617222 ZBED2Q9BTP6 218 aa17■□□□□ 0.31
PCDHGC3-204ENST00000617222 CXCL16Q9H2A7 254 aa17■□□□□ 0.31
PCDHGC3-204ENST00000617222 KIAA1586Q9HCI6 787 aa17■□□□□ 0.31
PCDHGC3-204ENST00000617222 INPP5FQ9Y2H2 1132 aa17■□□□□ 0.31
PCDHGC3-204ENST00000617222 TBKBP1A7MCY6 615 aa16.99■□□□□ 0.31
PCDHGC3-204ENST00000617222 GRXCR1A8MXD5 290 aa16.99■□□□□ 0.31
PCDHGC3-204ENST00000617222 LACTBL1A8MY62 500 aa16.99■□□□□ 0.31
PCDHGC3-204ENST00000617222 MEFVO15553 781 aaPredicted RBP16.99■□□□□ 0.31
PCDHGC3-204ENST00000617222 HOXA2O43364 376 aa16.99■□□□□ 0.31
PCDHGC3-204ENST00000617222 DGKIO75912 1065 aa16.99■□□□□ 0.31
PCDHGC3-204ENST00000617222 GJB5O95377 273 aa16.99■□□□□ 0.31
PCDHGC3-204ENST00000617222 MLH1P40692 756 aa16.99■□□□□ 0.31
PCDHGC3-204ENST00000617222 SNRNP35Q16560 246 aaKnown RBP16.99■□□□□ 0.31
PCDHGC3-204ENST00000617222 FOXR2Q6PJQ5 311 aa16.99■□□□□ 0.31
PCDHGC3-204ENST00000617222 TDHQ8IZJ6 230 aa16.99■□□□□ 0.31
PCDHGC3-204ENST00000617222 ABI1Q8IZP0 508 aa16.99■□□□□ 0.31
PCDHGC3-204ENST00000617222 CSGALNACT2Q8N6G5 542 aa16.99■□□□□ 0.31
PCDHGC3-204ENST00000617222 ZFP42Q96MM3 310 aa16.99■□□□□ 0.31
PCDHGC3-204ENST00000617222 CASD1Q96PB1 797 aa16.99■□□□□ 0.31
PCDHGC3-204ENST00000617222 SRRTQ9BXP5 876 aaKnown RBP16.99■□□□□ 0.31
PCDHGC3-204ENST00000617222 TMEM117Q9H0C3 514 aa16.99■□□□□ 0.31
PCDHGC3-204ENST00000617222 PRO3102Q9H379 93 aa16.99■□□□□ 0.31
PCDHGC3-204ENST00000617222 TOPORSQ9NS56 1045 aaPredicted RBP16.99■□□□□ 0.31
PCDHGC3-204ENST00000617222 MIOSQ9NXC5 875 aa16.99■□□□□ 0.31
PCDHGC3-204ENST00000617222 FRMD4BQ9Y2L6 1034 aa16.99■□□□□ 0.31
PCDHGC3-204ENST00000617222 TTC3P53804 2025 aa16.99■□□□□ 0.31
PCDHGC3-204ENST00000617222 ARL5CA6NH57 179 aa16.98■□□□□ 0.31
PCDHGC3-204ENST00000617222 AKAP3O75969 853 aa16.98■□□□□ 0.31
PCDHGC3-204ENST00000617222 ADRB2P07550 413 aa16.98■□□□□ 0.31
PCDHGC3-204ENST00000617222 PSMC2P35998 433 aaKnown RBP16.98■□□□□ 0.31
PCDHGC3-204ENST00000617222 AFF1P51825 1210 aaKnown RBP16.98■□□□□ 0.31
PCDHGC3-204ENST00000617222 HSP90AA2PQ14568 343 aaPredicted RBP16.98■□□□□ 0.31
PCDHGC3-204ENST00000617222 TPD52L1Q16890 204 aaPredicted RBP16.98■□□□□ 0.31
PCDHGC3-204ENST00000617222 PAN2Q504Q3 1202 aaKnown RBP16.98■□□□□ 0.31
PCDHGC3-204ENST00000617222 NOMO2Q5JPE7 1267 aa16.98■□□□□ 0.31
PCDHGC3-204ENST00000617222 FAM109BQ6ICB4 259 aaPredicted RBP16.98■□□□□ 0.31
PCDHGC3-204ENST00000617222 ALKAL1Q6UXT8 129 aa16.98■□□□□ 0.31
PCDHGC3-204ENST00000617222 LRRC55Q6ZSA7 311 aa16.98■□□□□ 0.31
PCDHGC3-204ENST00000617222 BRSK2Q8IWQ3 736 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms