RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 EIF6P56537 245 aaKnown RBP16.66■□□□□ 0.26
GPN1-212ENST00000616939 MCCD1P59942 119 aaPredicted RBP16.66■□□□□ 0.26
GPN1-212ENST00000616939 MRPS35P82673 323 aaKnown RBP16.66■□□□□ 0.26
GPN1-212ENST00000616939 SETDB1Q15047 1291 aa16.66■□□□□ 0.26
GPN1-212ENST00000616939 ANKRD35Q8N283 1001 aa16.66■□□□□ 0.26
GPN1-212ENST00000616939 ZNF564Q8TBZ8 553 aaPredicted RBP16.66■□□□□ 0.26
GPN1-212ENST00000616939 MKL1Q969V6 931 aa16.66■□□□□ 0.26
GPN1-212ENST00000616939 CCDC17Q96LX7 622 aa16.66■□□□□ 0.26
GPN1-212ENST00000616939 NINJ2Q9NZG7 142 aa16.66■□□□□ 0.26
GPN1-212ENST00000616939 SERPINB13Q9UIV8 391 aa16.66■□□□□ 0.26
GPN1-212ENST00000616939 SUGT1Q9Y2Z0 365 aa16.66■□□□□ 0.26
GPN1-212ENST00000616939 TRAFD1O14545 582 aaPredicted RBP16.65■□□□□ 0.26
GPN1-212ENST00000616939 MAPK13O15264 365 aa16.65■□□□□ 0.26
GPN1-212ENST00000616939 SPOPO43791 374 aa16.65■□□□□ 0.26
GPN1-212ENST00000616939 LINGO3P0C6S8 592 aa16.65■□□□□ 0.26
GPN1-212ENST00000616939 CHRNB2P17787 502 aa16.65■□□□□ 0.26
GPN1-212ENST00000616939 CHKAP35790 457 aa16.65■□□□□ 0.26
GPN1-212ENST00000616939 CETN1Q12798 172 aa16.65■□□□□ 0.26
GPN1-212ENST00000616939 LBRQ14739 615 aaKnown RBP16.65■□□□□ 0.26
GPN1-212ENST00000616939 SGSM1Q2NKQ1 1148 aa16.65■□□□□ 0.26
GPN1-212ENST00000616939 KCTD1Q719H9 257 aa16.65■□□□□ 0.26
GPN1-212ENST00000616939 OTUD6AQ7L8S5 288 aa16.65■□□□□ 0.26
GPN1-212ENST00000616939 CLEC10AQ8IUN9 316 aa16.65■□□□□ 0.26
GPN1-212ENST00000616939 C12orf56Q8IXR9 622 aa16.65■□□□□ 0.26
GPN1-212ENST00000616939 STK32AQ8WU08 396 aa16.65■□□□□ 0.26
GPN1-212ENST00000616939 CRAMP1Q96RY5 1269 aa16.65■□□□□ 0.26
GPN1-212ENST00000616939 HSD17B14Q9BPX1 270 aa16.65■□□□□ 0.26
GPN1-212ENST00000616939 CCDC77Q9BR77 488 aa16.65■□□□□ 0.26
GPN1-212ENST00000616939 TRAIPQ9BWF2 469 aa16.65■□□□□ 0.26
GPN1-212ENST00000616939 ETNK1Q9HBU6 452 aa16.65■□□□□ 0.26
GPN1-212ENST00000616939 NOCTQ9UK39 431 aaKnown RBP16.65■□□□□ 0.26
GPN1-212ENST00000616939 AHDC1Q5TGY3 1603 aaPredicted RBP16.65■□□□□ 0.26
GPN1-212ENST00000616939 RGPD3A6NKT7 1758 aaPredicted RBP16.65■□□□□ 0.26
GPN1-212ENST00000616939 RGPD4Q7Z3J3 1758 aa16.65■□□□□ 0.26
GPN1-212ENST00000616939 FAM86B1E9PN63 330 aa16.64■□□□□ 0.25
GPN1-212ENST00000616939 HNRNPCL1O60812 293 aaKnown RBP16.64■□□□□ 0.25
GPN1-212ENST00000616939 SKAP2O75563 359 aaPredicted RBP16.64■□□□□ 0.25
GPN1-212ENST00000616939 DCTN3O75935 186 aa16.64■□□□□ 0.25
GPN1-212ENST00000616939 LMNAP02545 664 aaKnown RBP16.64■□□□□ 0.25
GPN1-212ENST00000616939 FAM86B2P0C5J1 330 aa16.64■□□□□ 0.25
GPN1-212ENST00000616939 ATP6V1C1P21283 382 aa16.64■□□□□ 0.25
GPN1-212ENST00000616939 SGO2Q562F6 1265 aa16.64■□□□□ 0.25
GPN1-212ENST00000616939 MFSD14BQ5SR56 506 aa16.64■□□□□ 0.25
GPN1-212ENST00000616939 LMNTD2Q8IXW0 634 aa16.64■□□□□ 0.25
GPN1-212ENST00000616939 LARGE2Q8N3Y3 721 aa16.64■□□□□ 0.25
GPN1-212ENST00000616939 P2RX7Q99572 595 aaKnown RBP16.64■□□□□ 0.25
GPN1-212ENST00000616939 OSBPL1AQ9BXW6 950 aa16.64■□□□□ 0.25
GPN1-212ENST00000616939 TRIM33Q9UPN9 1127 aa16.64■□□□□ 0.25
GPN1-212ENST00000616939 PTPN22Q9Y2R2 807 aa16.64■□□□□ 0.25
GPN1-212ENST00000616939 THAP12O43422 761 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 LRRN2O75325 713 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 NPTXRO95502 500 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 GAS8O95995 478 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 ACADSP16219 412 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 KCNJ1P48048 391 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 CYP2J2P51589 502 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 GPSM2P81274 684 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 CENPCQ03188 943 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 ALCAMQ13740 583 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 COG2Q14746 738 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 NFIXQ14938 502 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 FAM71AQ8IYT1 594 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 GDAP1Q8TB36 358 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 PIGOQ8TEQ8 1089 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 UIMC1Q96RL1 719 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 PCDHB18PQ96TA0 734 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 NUP85Q9BW27 656 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 AMNQ9BXJ7 453 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 MYLK2Q9H1R3 596 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 TLE6Q9H808 572 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 UBE2TQ9NPD8 197 aaPredicted RBP16.63■□□□□ 0.25
GPN1-212ENST00000616939 SRP68Q9UHB9 627 aaKnown RBP16.63■□□□□ 0.25
GPN1-212ENST00000616939 ASIC3Q9UHC3 531 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 MROH7Q68CQ1 1323 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 SLX4Q8IY92 1834 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 FAM47DPA6NHR8 397 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 EML1O00423 815 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 PRPF4O43172 522 aaKnown RBP eCLIP16.63■□□□□ 0.25
GPN1-212ENST00000616939 GH1P01241 217 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 FOXN2P32314 431 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 ITGA8P53708 1063 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 SARNPP82979 210 aaKnown RBP16.63■□□□□ 0.25
GPN1-212ENST00000616939 CYP4A11Q02928 519 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 MOGSQ13724 837 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 ZC2HC1CQ53FD0 456 aaPredicted RBP16.63■□□□□ 0.25
GPN1-212ENST00000616939 TDRPQ86YL5 185 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 ARHGEF19Q8IW93 802 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 FAM178BQ8IXR5 827 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.63■□□□□ 0.25
GPN1-212ENST00000616939 EPS8L1Q8TE68 723 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 FBXO41Q8TF61 875 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 PITPNM3Q9BZ71 974 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 BCAS3Q9H6U6 928 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 KIF9Q9HAQ2 790 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 NYAP2Q9P242 653 aa16.63■□□□□ 0.25
GPN1-212ENST00000616939 ANKRD33BA6NCL7 494 aa16.62■□□□□ 0.25
GPN1-212ENST00000616939 TPBGLP0DKB5 382 aa16.62■□□□□ 0.25
GPN1-212ENST00000616939 MAPTP10636 758 aaKnown RBP16.62■□□□□ 0.25
GPN1-212ENST00000616939 ATF2P15336 505 aa16.62■□□□□ 0.25
GPN1-212ENST00000616939 POLD1P28340 1107 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms