RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 SLC9A9Q8IVB4 645 aa12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 MAGEC3Q8TD91 643 aa12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 SLC20A1Q8WUM9 679 aa12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 THOC1Q96FV9 657 aaKnown RBP12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 TMEM206Q9H813 350 aa12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 IRAK4Q9NWZ3 460 aa12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 TBX20Q9UMR3 447 aa12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 HYOU1Q9Y4L1 999 aa12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 FOXN3O00409 490 aaPredicted RBP12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 ATP2A1O14983 1001 aa12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 POTEJP0CG39 1038 aa12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 ABCB4P21439 1286 aa12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 SLC8A3P57103 927 aa12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 DMP1Q13316 513 aaPredicted RBP12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 NCAPG2Q86XI2 1143 aa12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 XXYLT1Q8NBI6 393 aa12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 ZIM3Q96PE6 472 aa12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 LRRC1Q9BTT6 524 aa12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 KMT5AQ9NQR1 393 aa12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 SEPT11Q9NVA2 429 aaKnown RBP12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 HOXC10Q9NYD6 342 aa12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 CHORDC1Q9UHD1 332 aaPredicted RBP12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 FBXL5Q9UKA1 691 aa12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 KRT13P13646 458 aa12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 CNGA1P29973 690 aa12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 CCDC70Q6NSX1 233 aa12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 C6orf89Q6UWU4 347 aa12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 ABHD15Q6UXT9 468 aa12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 LBX2Q6XYB7 198 aa12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 TAS1R3Q7RTX0 852 aa12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 SAMD3Q8N6K7 520 aa12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 SPATA4Q8NEY3 305 aa12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 TMEM143Q96AN5 459 aa12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 TMEM117Q9H0C3 514 aa12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 UBE2TQ9NPD8 197 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 OSGEPQ9NPF4 335 aa12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 RBM12Q9NTZ6 932 aaKnown RBP12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 ANKEF1Q9NU02 776 aa12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 NENFQ9UMX5 172 aa12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 PCDHGC5Q9Y5F6 944 aa12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 SPATA31C2B4DYI2 1134 aa12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 CAND2O75155 1236 aa12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 PGK2P07205 417 aa12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 STAT1P42224 750 aa12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 RWDD2BP57060 319 aa12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 DRP2Q13474 957 aa12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 SNRNP35Q16560 246 aaKnown RBP12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 ALS2CLQ60I27 953 aa12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 LMBRD2Q68DH5 695 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 KDM7AQ6ZMT4 941 aa12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 INTS8Q75QN2 995 aaKnown RBP12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 PNMA8AQ86V59 439 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 MAB21L3Q8N8X9 362 aa12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 SEMA4DQ92854 862 aa12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 STK33Q9BYT3 514 aa12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 OSBPL7Q9BZF2 842 aa12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 ACTR5Q9H9F9 607 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 TXNRD2Q9NNW7 524 aa12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 PPANQ9NQ55 473 aaKnown RBP12.28□□□□□ -0.44
PCDHGA9-202ENST00000616887 CALCAP01258 141 aa12.27□□□□□ -0.44
PCDHGA9-202ENST00000616887 PSAPP07602 524 aa12.27□□□□□ -0.44
PCDHGA9-202ENST00000616887 CDC25CP30307 473 aa12.27□□□□□ -0.44
PCDHGA9-202ENST00000616887 WNT7BP56706 349 aa12.27□□□□□ -0.44
PCDHGA9-202ENST00000616887 SH3D19Q5HYK7 790 aa12.27□□□□□ -0.44
PCDHGA9-202ENST00000616887 MAP4K3Q8IVH8 894 aa12.27□□□□□ -0.44
PCDHGA9-202ENST00000616887 RNF10Q8N5U6 811 aaKnown RBP12.27□□□□□ -0.44
PCDHGA9-202ENST00000616887 SPDYE1Q8NFV5 336 aaPredicted RBP12.27□□□□□ -0.44
PCDHGA9-202ENST00000616887 NSMCE1Q8WV22 266 aa12.27□□□□□ -0.44
PCDHGA9-202ENST00000616887 ATP6V0A1Q93050 837 aa12.27□□□□□ -0.44
PCDHGA9-202ENST00000616887 ITFG2Q969R8 447 aa12.27□□□□□ -0.44
PCDHGA9-202ENST00000616887 POLR3FQ9H1D9 316 aaPredicted RBP12.27□□□□□ -0.44
PCDHGA9-202ENST00000616887 CYP26B1Q9NR63 512 aa12.27□□□□□ -0.44
PCDHGA9-202ENST00000616887 CSADQ9Y600 493 aa12.27□□□□□ -0.44
PCDHGA9-202ENST00000616887 SOWAHBA6NEL2 793 aa12.27□□□□□ -0.45
PCDHGA9-202ENST00000616887 ZSCAN5CA6NGD5 496 aaPredicted RBP12.27□□□□□ -0.45
PCDHGA9-202ENST00000616887 FAM107AO95990 144 aa12.27□□□□□ -0.45
PCDHGA9-202ENST00000616887 MAPTP10636 758 aaKnown RBP12.27□□□□□ -0.45
PCDHGA9-202ENST00000616887 UBA1P22314 1058 aaKnown RBP12.27□□□□□ -0.45
PCDHGA9-202ENST00000616887 RBBP5Q15291 538 aaKnown RBP12.27□□□□□ -0.45
PCDHGA9-202ENST00000616887 EPC2Q52LR7 807 aa12.27□□□□□ -0.45
PCDHGA9-202ENST00000616887 TMEM63BQ5T3F8 832 aa12.27□□□□□ -0.45
PCDHGA9-202ENST00000616887 CCDC181Q5TID7 509 aa12.27□□□□□ -0.45
PCDHGA9-202ENST00000616887 CDCA2Q69YH5 1023 aaPredicted RBP12.27□□□□□ -0.45
PCDHGA9-202ENST00000616887 XRRA1Q6P2D8 792 aa12.27□□□□□ -0.45
PCDHGA9-202ENST00000616887 SENP7Q9BQF6 1050 aa12.27□□□□□ -0.45
PCDHGA9-202ENST00000616887 SYT11Q9BT88 431 aa12.27□□□□□ -0.45
PCDHGA9-202ENST00000616887 OTOFQ9HC10 1997 aa12.27□□□□□ -0.45
PCDHGA9-202ENST00000616887 HNRNPDLO14979 420 aaKnown RBP12.26□□□□□ -0.45
PCDHGA9-202ENST00000616887 SNUPNO95149 360 aaKnown RBP12.26□□□□□ -0.45
PCDHGA9-202ENST00000616887 SUPT20HL2P0C7V6 817 aa12.26□□□□□ -0.45
PCDHGA9-202ENST00000616887 DLATP10515 647 aaKnown RBP12.26□□□□□ -0.45
PCDHGA9-202ENST00000616887 FERP16591 822 aa12.26□□□□□ -0.45
PCDHGA9-202ENST00000616887 TCP1P17987 556 aaKnown RBP12.26□□□□□ -0.45
PCDHGA9-202ENST00000616887 NR1D1P20393 614 aa12.26□□□□□ -0.45
PCDHGA9-202ENST00000616887 MXI1P50539 228 aa12.26□□□□□ -0.45
PCDHGA9-202ENST00000616887 ALDH5A1P51649 535 aaPredicted RBP12.26□□□□□ -0.45
PCDHGA9-202ENST00000616887 GALCP54803 685 aa12.26□□□□□ -0.45
PCDHGA9-202ENST00000616887 MYO1EQ12965 1108 aa12.26□□□□□ -0.45
PCDHGA9-202ENST00000616887 GNPTABQ3T906 1256 aa12.26□□□□□ -0.45
PCDHGA9-202ENST00000616887 MEI1Q5TIA1 1274 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms