RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 CYP11B2P19099 503 aa14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 SKIV2L2P42285 1042 aaKnown RBP14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 RPL21P46778 160 aaKnown RBP14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 IZUMO3Q5VZ72 239 aa14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 THOC7Q6I9Y2 204 aaKnown RBP14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 PLEKHA7Q6IQ23 1121 aa14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 CHADLQ6NUI6 762 aa14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 RFWD3Q6PCD5 774 aa14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 SH3TC2Q8TF17 1288 aa14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 RNF25Q96BH1 459 aaPredicted RBP14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 HSPBAP1Q96EW2 488 aa14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 RBM15Q96T37 977 aaKnown RBP eCLIP14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 PRDM16Q9HAZ2 1276 aa14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 PCDHA4Q9UN74 947 aa14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 SMG5Q9UPR3 1016 aaKnown RBP14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 WASF2Q9Y6W5 498 aa14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 DEPDC5O75140 1603 aa14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 KDM6AO15550 1401 aaPredicted RBP14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 WDR19Q8NEZ3 1342 aa14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 SGK1O00141 431 aa14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 MRPS15P82914 257 aaKnown RBP14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 OCA2Q04671 838 aa14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 AK8Q96MA6 479 aa14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 LZTS2Q9BRK4 669 aa14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 KIAA1024Q9UPX6 916 aa14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 PLEKHG1Q9ULL1 1385 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 DDX3XO00571 662 aaKnown RBP eCLIP14.35□□□□□ -0.112e-8■■■□□ 15.4
PPP4R3B-205ENST00000616288 LPXNO60711 386 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 ITGA8P53708 1063 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 RASGRF1Q13972 1273 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 EARS2Q5JPH6 523 aaKnown RBP14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 C4orf50Q6ZRC1 276 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 ZNF662Q6ZS27 426 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 PPM1KQ8N3J5 372 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 ENAHQ8N8S7 591 aaPredicted RBP14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 PARVBQ9HBI1 364 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 ARHGAP26Q9UNA1 814 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 VWDEQ8N2E2 1590 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 OVOS2A0A0G2JMS6 1433 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 CLDN3O15551 220 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 TBC1D12O60347 775 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 ASMTLO95671 621 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 MAN1A1P33908 653 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 OTUD4Q01804 1114 aaKnown RBP14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 PDXDC2PQ6P474 469 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 GUF1Q8N442 669 aaKnown RBP14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 GDPD5Q8WTR4 605 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 PPP1R14BQ96C90 147 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 ZBED2Q9BTP6 218 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 TIPINQ9BVW5 301 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 PIH1D3Q9NQM4 214 aaKnown RBP14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 RRN3Q9NYV6 651 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 TRIM17Q9Y577 477 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 RFX7Q2KHR2 1363 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 MAP4P27816 1152 aaKnown RBP14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 ZNF200P98182 395 aaPredicted RBP14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 BFSP1Q12934 665 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 IRF2BP1Q8IU81 584 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 ANKMY2Q8IV38 441 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 AGBL1Q96MI9 1066 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 ACAP3Q96P50 834 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 STRBPQ96SI9 672 aaKnown RBP14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 MTFR1LQ9H019 292 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 TRPV6Q9H1D0 765 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 PCDH11XQ9BZA7 1347 aa14.35□□□□□ -0.11
PPP4R3B-205ENST00000616288 PJA2O43164 708 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 MAPK4P31152 587 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 TUFMP49411 452 aaKnown RBP14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 CLCN2P51788 898 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 PDK3Q15120 406 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 RHOT2Q8IXI1 618 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 DUSP9Q99956 384 aaKnown RBP14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 OCEL1Q9H607 264 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 GPR108Q9NPR9 543 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 APOBEC2Q9Y235 224 aaKnown RBP14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 COPEO14579 308 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 MYL2P10916 166 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 KRT4P19013 534 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 ARPC4P59998 168 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 ITGA7Q13683 1181 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 CYP4X1Q8N118 509 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 MYCT1Q8N699 235 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 SPIRE2Q8WWL2 714 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 GIMAP4Q9NUV9 329 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 CNOT7Q9UIV1 285 aaKnown RBP14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 PHF24Q9UPV7 400 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 CD163L1Q9NR16 1453 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 IGSF1Q8N6C5 1336 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 AGLP35573 1532 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 ANPEPP15144 967 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 RPL5P46777 297 aaKnown RBP14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 NTRK3Q16288 839 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 TRMT5Q32P41 509 aaKnown RBP14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 HEATR4Q86WZ0 1026 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 LCORLQ8N3X6 602 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 EIF1ADQ8N9N8 165 aaKnown RBP14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 ZCRB1Q8TBF4 217 aaKnown RBP14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 SLC13A1Q9BZW2 595 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 DNAJC5BQ9UF47 199 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 DNAJC12Q9UKB3 198 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms