RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 DYDC2Q96IM9 177 aa11.79□□□□□ -0.52
COL4A1-205ENST00000615732 RPGRIP1Q96KN7 1286 aa11.79□□□□□ -0.52
COL4A1-205ENST00000615732 MAP7D2Q96T17 732 aa11.79□□□□□ -0.52
COL4A1-205ENST00000615732 TSG101Q99816 390 aa11.79□□□□□ -0.52
COL4A1-205ENST00000615732 UNC45AQ9H3U1 944 aa11.79□□□□□ -0.52
COL4A1-205ENST00000615732 ZHX3Q9H4I2 956 aa11.79□□□□□ -0.52
COL4A1-205ENST00000615732 SLC39A2Q9NP94 309 aa11.79□□□□□ -0.52
COL4A1-205ENST00000615732 AAASQ9NRG9 546 aa11.79□□□□□ -0.52
COL4A1-205ENST00000615732 TBC1D22BQ9NU19 505 aa11.79□□□□□ -0.52
COL4A1-205ENST00000615732 RNF19AQ9NV58 838 aa11.79□□□□□ -0.52
COL4A1-205ENST00000615732 TMEM161AQ9NX61 479 aa11.79□□□□□ -0.52
COL4A1-205ENST00000615732 PCDHA10Q9Y5I2 948 aa11.79□□□□□ -0.52
COL4A1-205ENST00000615732 CFAP54Q96N23 3096 aa11.79□□□□□ -0.52
COL4A1-205ENST00000615732 TMEM150BA6NC51 233 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 WDR64B1ANS9 1081 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 KCNJ18B7U540 433 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 FSCN2O14926 492 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 TBCAO75347 108 aaKnown RBP11.78□□□□□ -0.52
COL4A1-205ENST00000615732 CSDE1O75534 798 aaKnown RBP11.78□□□□□ -0.52
COL4A1-205ENST00000615732 KIF20AO95235 890 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 FGFR1OPO95684 399 aaKnown RBP11.78□□□□□ -0.52
COL4A1-205ENST00000615732 SPATA31C1P0DKV0 1188 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 LAG3P18627 525 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 SFPQP23246 707 aaKnown RBP eCLIP11.78□□□□□ -0.52
COL4A1-205ENST00000615732 CLCN1P35523 988 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 SLC12A3P55017 1021 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 SIGLEC14Q08ET2 396 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 DRP2Q13474 957 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 CTTNQ14247 550 aaKnown RBP11.78□□□□□ -0.52
COL4A1-205ENST00000615732 KCNJ12Q14500 433 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 DUSP6Q16828 381 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 FAM26FQ5R3K3 315 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 ODR4Q5SWX8 454 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 EFCAB12Q6NXP0 572 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 VSTM4Q8IW00 320 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 TPH2Q8IWU9 490 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 FBXL6Q8N531 539 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 LINC01465Q8N7H1 131 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 ASIC4Q96FT7 647 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 FAM167AQ96KS9 214 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 MED15Q96RN5 788 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 TCF25Q9BQ70 676 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 SH2D3AQ9BRG2 576 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 ADAMTS10Q9H324 1103 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 KCNF1Q9H3M0 494 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 THAP9Q9H5L6 903 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 ENTPD7Q9NQZ7 604 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.78□□□□□ -0.52
COL4A1-205ENST00000615732 CDH22Q9UJ99 828 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 DMDP11532 3685 aa11.78□□□□□ -0.52
COL4A1-205ENST00000615732 ZDBF2Q9HCK1 2354 aa11.77□□□□□ -0.52
COL4A1-205ENST00000615732 A0A1B0GTH6 734 aa11.77□□□□□ -0.53
COL4A1-205ENST00000615732 TRIM49BA6NDI0 452 aa11.77□□□□□ -0.53
COL4A1-205ENST00000615732 HIDE1A8MVS5 230 aa11.77□□□□□ -0.53
COL4A1-205ENST00000615732 ZNF500O60304 480 aaPredicted RBP11.77□□□□□ -0.53
COL4A1-205ENST00000615732 ATF7P17544 494 aaPredicted RBP11.77□□□□□ -0.53
COL4A1-205ENST00000615732 CYP11B2P19099 503 aa11.77□□□□□ -0.53
COL4A1-205ENST00000615732 GPC3P51654 580 aa11.77□□□□□ -0.53
COL4A1-205ENST00000615732 UBE3AQ05086 875 aa11.77□□□□□ -0.53
COL4A1-205ENST00000615732 STK4Q13043 487 aa11.77□□□□□ -0.53
COL4A1-205ENST00000615732 CLLU1OSQ5K130 101 aa11.77□□□□□ -0.53
COL4A1-205ENST00000615732 LRRC55Q6ZSA7 311 aa11.77□□□□□ -0.53
COL4A1-205ENST00000615732 ABI1Q8IZP0 508 aa11.77□□□□□ -0.53
COL4A1-205ENST00000615732 LRRC43Q8N309 656 aa11.77□□□□□ -0.53
COL4A1-205ENST00000615732 CSGALNACT2Q8N6G5 542 aa11.77□□□□□ -0.53
COL4A1-205ENST00000615732 SYT2Q8N9I0 419 aaPredicted RBP11.77□□□□□ -0.53
COL4A1-205ENST00000615732 KIAA0895Q8NCT3 520 aa11.77□□□□□ -0.53
COL4A1-205ENST00000615732 NLRP7Q8WX94 980 aa11.77□□□□□ -0.53
COL4A1-205ENST00000615732 DNAJC19Q96DA6 116 aa11.77□□□□□ -0.53
COL4A1-205ENST00000615732 SNX27Q96L92 541 aa11.77□□□□□ -0.53
COL4A1-205ENST00000615732 CCDC43Q96MW1 224 aaKnown RBP11.77□□□□□ -0.53
COL4A1-205ENST00000615732 NAP1L5Q96NT1 182 aaPredicted RBP11.77□□□□□ -0.53
COL4A1-205ENST00000615732 CASD1Q96PB1 797 aa11.77□□□□□ -0.53
COL4A1-205ENST00000615732 TMEM117Q9H0C3 514 aa11.77□□□□□ -0.53
COL4A1-205ENST00000615732 FAM86C1Q9NVL1 165 aa11.77□□□□□ -0.53
COL4A1-205ENST00000615732 RGL1Q9NZL6 768 aa11.77□□□□□ -0.53
COL4A1-205ENST00000615732 LIMA1Q9UHB6 759 aaKnown RBP11.77□□□□□ -0.53
COL4A1-205ENST00000615732 SEPT9Q9UHD8 586 aaPredicted RBP11.77□□□□□ -0.53
COL4A1-205ENST00000615732 NPHP3-ACAD11A0A0J9YXS1 232 aa11.76□□□□□ -0.53
COL4A1-205ENST00000615732 N4BP3O15049 544 aa11.76□□□□□ -0.53
COL4A1-205ENST00000615732 FAM13AO94988 1023 aa11.76□□□□□ -0.53
COL4A1-205ENST00000615732 TPM1P09493 284 aa11.76□□□□□ -0.53
COL4A1-205ENST00000615732 EIF4BP23588 611 aaKnown RBP11.76□□□□□ -0.53
COL4A1-205ENST00000615732 EEF1GP26641 437 aaKnown RBP11.76□□□□□ -0.53
COL4A1-205ENST00000615732 CA8P35219 290 aa11.76□□□□□ -0.53
COL4A1-205ENST00000615732 JAK3P52333 1124 aa11.76□□□□□ -0.53
COL4A1-205ENST00000615732 COPB1P53618 953 aaKnown RBP11.76□□□□□ -0.53
COL4A1-205ENST00000615732 FAM189BP81408 668 aa11.76□□□□□ -0.53
COL4A1-205ENST00000615732 CACNB1Q02641 598 aaPredicted RBP11.76□□□□□ -0.53
COL4A1-205ENST00000615732 LRMPQ12912 555 aa11.76□□□□□ -0.53
COL4A1-205ENST00000615732 KCNC3Q14003 757 aa11.76□□□□□ -0.53
COL4A1-205ENST00000615732 KRT31Q15323 416 aa11.76□□□□□ -0.53
COL4A1-205ENST00000615732 PTPN21Q16825 1174 aa11.76□□□□□ -0.53
COL4A1-205ENST00000615732 MTERF2Q49AM1 385 aa11.76□□□□□ -0.53
COL4A1-205ENST00000615732 TCP11X2Q5H9J9 407 aa11.76□□□□□ -0.53
COL4A1-205ENST00000615732 TTI2Q6NXR4 508 aa11.76□□□□□ -0.53
COL4A1-205ENST00000615732 KCNT2Q6UVM3 1135 aa11.76□□□□□ -0.53
COL4A1-205ENST00000615732 ECHDC2Q86YB7 292 aa11.76□□□□□ -0.53
COL4A1-205ENST00000615732 LRRC8AQ8IWT6 810 aa11.76□□□□□ -0.53
COL4A1-205ENST00000615732 GUF1Q8N442 669 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms