RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 STX2P32856 288 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 NNMTP40261 264 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 OR1G1P47890 313 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 IQSEC1Q6DN90 963 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 SEPT8Q92599 483 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 SCYL1Q96KG9 808 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 DDX56Q9NY93 547 aaKnown RBP10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 MKRN1Q9UHC7 482 aaKnown RBP10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 YY1P25490 414 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 PDE1BQ01064 536 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 GRIN1Q05586 938 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 THOC5Q13769 683 aaKnown RBP10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 SNX17Q15036 470 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 GLYCTKQ8IVS8 523 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 COLEC11Q9BWP8 271 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 LMCD1Q9NZU5 365 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 FZD1Q9UP38 647 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 PEAK1Q9H792 1746 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 ANO9A1A5B4 782 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 ZNF189O75820 626 aaPredicted RBP10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 TAF6P49848 677 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 SKIV2LQ15477 1246 aaKnown RBP10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 FAM117BQ6P1L5 589 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 NLGN2Q8NFZ4 835 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 PPP4R1Q8TF05 950 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 NT5C1AQ9BXI3 368 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 NIF3L1Q9GZT8 377 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 HMX1Q9NP08 348 aaPredicted RBP10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 PFDN4Q9NQP4 134 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 AGPAT3Q9NRZ7 376 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 TRIM17Q9Y577 477 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 A0A1B0GTH6 734 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 SLC15A5A6NIM6 579 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 KRT17Q04695 432 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 FMR1Q06787 632 aaKnown RBP eCLIP10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 RBBP8NLQ8NC74 664 aaPredicted RBP10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 RFFLQ8WZ73 363 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 C18orf8Q96DM3 657 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 MAGED2Q9UNF1 606 aaPredicted RBP10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 H3BRJ5 948 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 RTN2O75298 545 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 FGGP02679 453 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 S100BP04271 92 aaPredicted RBP10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 TOB1P50616 345 aaPredicted RBP10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 PLTPP55058 493 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 NOP14P78316 857 aaKnown RBP10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 DR1Q01658 176 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 ACVR2BQ13705 512 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 MPZL3Q6UWV2 235 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 TLK2Q86UE8 772 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 ANKRD42Q8N9B4 389 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 GANCQ8TET4 914 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 SKA2Q8WVK7 121 aaPredicted RBP10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 KLC2Q9H0B6 622 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 EPB41L5Q9HCM4 733 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 XPNPEP3Q9NQH7 507 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 PCDHAC2Q9Y5I4 1007 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 FAM208AQ9UK61 1670 aaKnown RBP10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 BNIP3LO60238 219 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 GARTP22102 1010 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 PPARGP37231 505 aaPredicted RBP10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 GTF2A1P52655 376 aaPredicted RBP10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 LY6KQ17RY6 165 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 RHOT1Q8IXI2 618 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 MED15Q96RN5 788 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 GOLGA8KD6RF30 607 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 PPFIA4O75335 1185 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 LCP1P13796 627 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 SAT1P21673 171 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 GUCY2CP25092 1073 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 NPTX2P47972 431 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 EPHB4P54760 987 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 SLMAPQ14BN4 828 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 CC2D1AQ6P1N0 951 aaPredicted RBP10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 PDIK1LQ8N165 341 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 KLRG1Q96E93 195 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 KIFC3Q9BVG8 833 aa10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 KLHL8Q9P2G9 620 aaPredicted RBP10.04□□□□□ -0.8
CLTCL1-208ENST00000615606 ITIH6Q6UXX5 1313 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 TOM1L1O75674 476 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 CYP3A4P08684 503 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 UCHL3P15374 230 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 TATDN1Q6P1N9 297 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 TAF2Q6P1X5 1199 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 SH3TC2Q8TF17 1288 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 SLC5A5Q92911 643 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 PCSK1NQ9UHG2 260 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 ZNF541Q9H0D2 1346 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 NDUFAB1O14561 156 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 CREB3O43889 395 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 MSCO60682 206 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 ZFXP17010 805 aaPredicted RBP10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 CNTN2Q02246 1040 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 NME3Q13232 169 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 SEPT6Q14141 434 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 NUDT18Q6ZVK8 323 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 B4GALNT4Q76KP1 1039 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 KSR1Q8IVT5 923 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 YAF2Q8IY57 180 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 HPDLQ96IR7 371 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms