RNA–Protein interactions for RNA: ENST00000615393.5

VEGFA-227, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 984 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-227ENST00000615393 RARS2Q5T160 578 aaKnown RBP27.72■■■□□ 2.03
VEGFA-227ENST00000615393 FUT10Q6P4F1 479 aa27.72■■■□□ 2.03
VEGFA-227ENST00000615393 TAS1R1Q7RTX1 841 aa27.72■■■□□ 2.03
VEGFA-227ENST00000615393 CALML4Q96GE6 196 aa27.72■■■□□ 2.03
VEGFA-227ENST00000615393 MRPL4Q9BYD3 311 aaKnown RBP27.72■■■□□ 2.03
VEGFA-227ENST00000615393 ADAM28Q9UKQ2 775 aa27.72■■■□□ 2.03
VEGFA-227ENST00000615393 GDAQ9Y2T3 454 aa27.72■■■□□ 2.03
VEGFA-227ENST00000615393 SPDYE4A6NLX3 237 aa27.71■■■□□ 2.03
VEGFA-227ENST00000615393 PRR33A8MZF0 331 aa27.71■■■□□ 2.03
VEGFA-227ENST00000615393 F8W810 466 aa27.71■■■□□ 2.03
VEGFA-227ENST00000615393 PLA2G4BP0C869 781 aa27.71■■■□□ 2.03
VEGFA-227ENST00000615393 CLCN4P51793 760 aa27.71■■■□□ 2.03
VEGFA-227ENST00000615393 SLC12A3P55017 1021 aa27.71■■■□□ 2.03
VEGFA-227ENST00000615393 DSG1Q02413 1049 aa27.71■■■□□ 2.03
VEGFA-227ENST00000615393 HSP90AA2PQ14568 343 aaPredicted RBP27.71■■■□□ 2.03
VEGFA-227ENST00000615393 FBXL18Q96ME1 805 aa27.71■■■□□ 2.03
VEGFA-227ENST00000615393 NR2E1Q9Y466 385 aa27.71■■■□□ 2.03
VEGFA-227ENST00000615393 PTGESO14684 152 aa27.7■■■□□ 2.02
VEGFA-227ENST00000615393 TADA2AO75478 443 aa27.7■■■□□ 2.02
VEGFA-227ENST00000615393 ADH1AP07327 375 aa27.7■■■□□ 2.02
VEGFA-227ENST00000615393 LONP1P36776 959 aaKnown RBP27.7■■■□□ 2.02
VEGFA-227ENST00000615393 SMTNP53814 917 aa27.7■■■□□ 2.02
VEGFA-227ENST00000615393 RAD51AP2Q09MP3 1159 aa27.7■■■□□ 2.02
VEGFA-227ENST00000615393 SF3A1Q15459 793 aaKnown RBP27.7■■■□□ 2.02
VEGFA-227ENST00000615393 KIAA0319Q5VV43 1072 aa27.7■■■□□ 2.02
VEGFA-227ENST00000615393 C12orf76Q8N812 135 aaPredicted RBP27.7■■■□□ 2.02
VEGFA-227ENST00000615393 ACO2Q99798 780 aaKnown RBP27.7■■■□□ 2.02
VEGFA-227ENST00000615393 SFXN1Q9H9B4 322 aa27.7■■■□□ 2.02
VEGFA-227ENST00000615393 CHST7Q9NS84 486 aa27.7■■■□□ 2.02
VEGFA-227ENST00000615393 PLS3P13797 630 aa27.69■■■□□ 2.02
VEGFA-227ENST00000615393 USP41Q3LFD5 358 aa27.69■■■□□ 2.02
VEGFA-227ENST00000615393 ZNF568Q3ZCX4 644 aa27.69■■■□□ 2.02
VEGFA-227ENST00000615393 ATAT1Q5SQI0 421 aa27.69■■■□□ 2.02
VEGFA-227ENST00000615393 SPIRE2Q8WWL2 714 aa27.69■■■□□ 2.02
VEGFA-227ENST00000615393 INTS4Q96HW7 963 aaKnown RBP27.69■■■□□ 2.02
VEGFA-227ENST00000615393 NTPCRQ9BSD7 190 aaKnown RBP27.69■■■□□ 2.02
VEGFA-227ENST00000615393 RXFP1Q9HBX9 757 aa27.69■■■□□ 2.02
VEGFA-227ENST00000615393 DPP7Q9UHL4 492 aa27.69■■■□□ 2.02
VEGFA-227ENST00000615393 SF3B1O75533 1304 aaKnown RBP eCLIP27.68■■■□□ 2.026e-7■■■■■ 31.1
VEGFA-227ENST00000615393 CASTOR2A6NHX0 329 aa27.68■■■□□ 2.02
VEGFA-227ENST00000615393 SFI1A8K8P3 1242 aa27.68■■■□□ 2.02
VEGFA-227ENST00000615393 SLC16A4O15374 487 aa27.68■■■□□ 2.02
VEGFA-227ENST00000615393 ELMSAN1Q6PJG2 1045 aa27.68■■■□□ 2.02
VEGFA-227ENST00000615393 TAS1R3Q7RTX0 852 aa27.68■■■□□ 2.02
VEGFA-227ENST00000615393 GPR65Q8IYL9 337 aa27.68■■■□□ 2.02
VEGFA-227ENST00000615393 RABGGTAQ92696 567 aa27.68■■■□□ 2.02
VEGFA-227ENST00000615393 GPR62Q9BZJ7 368 aa27.68■■■□□ 2.02
VEGFA-227ENST00000615393 POMKQ9H5K3 350 aa27.68■■■□□ 2.02
VEGFA-227ENST00000615393 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.68■■■□□ 2.02
VEGFA-227ENST00000615393 CDH22Q9UJ99 828 aa27.68■■■□□ 2.02
VEGFA-227ENST00000615393 TEX28O15482 410 aa27.67■■■□□ 2.02
VEGFA-227ENST00000615393 YARSP54577 528 aaKnown RBP27.67■■■□□ 2.02
VEGFA-227ENST00000615393 CREMQ03060 361 aa27.67■■■□□ 2.02
VEGFA-227ENST00000615393 STRN3Q13033 797 aa27.67■■■□□ 2.02
VEGFA-227ENST00000615393 RASSF8Q8NHQ8 419 aa27.67■■■□□ 2.02
VEGFA-227ENST00000615393 PAAF1Q9BRP4 392 aa27.67■■■□□ 2.02
VEGFA-227ENST00000615393 CCDC94Q9BW85 323 aaPredicted RBP27.67■■■□□ 2.02
VEGFA-227ENST00000615393 TARS2Q9BW92 718 aaKnown RBP27.67■■■□□ 2.02
VEGFA-227ENST00000615393 CDT1Q9H211 546 aa27.67■■■□□ 2.02
VEGFA-227ENST00000615393 TSHZ2Q9NRE2 1034 aa27.67■■■□□ 2.02
VEGFA-227ENST00000615393 TOPORSQ9NS56 1045 aaPredicted RBP27.67■■■□□ 2.02
VEGFA-227ENST00000615393 CACNG4Q9UBN1 327 aa27.67■■■□□ 2.02
VEGFA-227ENST00000615393 RAPGEFL1Q9UHV5 662 aa27.67■■■□□ 2.02
VEGFA-227ENST00000615393 HCN4Q9Y3Q4 1203 aa27.67■■■□□ 2.02
VEGFA-227ENST00000615393 SYT1P21579 422 aa27.66■■■□□ 2.02
VEGFA-227ENST00000615393 GRM5P41594 1212 aa27.66■■■□□ 2.02
VEGFA-227ENST00000615393 NAB2Q15742 525 aa27.66■■■□□ 2.02
VEGFA-227ENST00000615393 TMC5Q6UXY8 1006 aa27.66■■■□□ 2.02
VEGFA-227ENST00000615393 EDAQ92838 391 aa27.66■■■□□ 2.02
VEGFA-227ENST00000615393 TCHPQ9BT92 498 aa27.66■■■□□ 2.02
VEGFA-227ENST00000615393 PTPRHQ9HD43 1115 aa27.66■■■□□ 2.02
VEGFA-227ENST00000615393 LARSQ9P2J5 1176 aaKnown RBP27.66■■■□□ 2.02
VEGFA-227ENST00000615393 H0YCG3 227 aa27.65■■■□□ 2.02
VEGFA-227ENST00000615393 K7ELQ4 463 aaPredicted RBP27.65■■■□□ 2.02
VEGFA-227ENST00000615393 GLUD1P00367 558 aa27.65■■■□□ 2.02
VEGFA-227ENST00000615393 WEE2P0C1S8 567 aa27.65■■■□□ 2.02
VEGFA-227ENST00000615393 SP100P23497 879 aaPredicted RBP27.65■■■□□ 2.02
VEGFA-227ENST00000615393 KANK3Q6NY19 840 aa27.65■■■□□ 2.02
VEGFA-227ENST00000615393 MPZL3Q6UWV2 235 aa27.65■■■□□ 2.02
VEGFA-227ENST00000615393 TMEM161BQ8NDZ6 487 aa27.65■■■□□ 2.02
VEGFA-227ENST00000615393 RIN2Q8WYP3 895 aaPredicted RBP27.65■■■□□ 2.02
VEGFA-227ENST00000615393 B3GALT6Q96L58 329 aa27.65■■■□□ 2.02
VEGFA-227ENST00000615393 CXCL16Q9H2A7 254 aa27.65■■■□□ 2.02
VEGFA-227ENST00000615393 MAN1C1Q9NR34 630 aa27.65■■■□□ 2.02
VEGFA-227ENST00000615393 FNIP2Q9P278 1114 aa27.65■■■□□ 2.02
VEGFA-227ENST00000615393 ODF2LQ9ULJ1 636 aa27.65■■■□□ 2.02
VEGFA-227ENST00000615393 KIF4AO95239 1232 aa27.64■■■□□ 2.02
VEGFA-227ENST00000615393 C1RP00736 705 aa27.64■■■□□ 2.02
VEGFA-227ENST00000615393 MCF2P10911 925 aa27.64■■■□□ 2.02
VEGFA-227ENST00000615393 PROZP22891 400 aa27.64■■■□□ 2.02
VEGFA-227ENST00000615393 GRIN1Q05586 938 aa27.64■■■□□ 2.02
VEGFA-227ENST00000615393 ELAVL2Q12926 359 aaKnown RBP27.64■■■□□ 2.02
VEGFA-227ENST00000615393 ARSHQ5FYA8 562 aa27.64■■■□□ 2.02
VEGFA-227ENST00000615393 GPR149Q86SP6 731 aa27.64■■■□□ 2.02
VEGFA-227ENST00000615393 ZBTB33Q86T24 672 aa27.64■■■□□ 2.02
VEGFA-227ENST00000615393 GPBP1Q86WP2 473 aa27.64■■■□□ 2.02
VEGFA-227ENST00000615393 HASPINQ8TF76 798 aa27.64■■■□□ 2.02
VEGFA-227ENST00000615393 PPP1R10Q96QC0 940 aaKnown RBP27.64■■■□□ 2.02
VEGFA-227ENST00000615393 NPHP3-ACAD11A0A0J9YXS1 232 aa27.63■■■□□ 2.01
VEGFA-227ENST00000615393 MAPTP10636 758 aaKnown RBP27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms