RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 DARS2Q6PI48 645 aaKnown RBP11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 POGZQ7Z3K3 1410 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 INTS7Q9NVH2 962 aaKnown RBP11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 CLIC4Q9Y696 253 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 ADGRA2Q96PE1 1338 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 UGGT1Q9NYU2 1555 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 CYP21A2P08686 494 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 NFX1Q12986 1120 aaKnown RBP11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 PTGDRQ13258 359 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 MAP4K1Q92918 833 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 LLPHQ9BRT6 129 aaKnown RBP11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 RPF1Q9H9Y2 349 aaKnown RBP11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 TNNI3P19429 210 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 NDUFA8P51970 172 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 TMED2Q15363 201 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 SRRM1Q8IYB3 904 aaKnown RBP11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 IQUBQ8NA54 791 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 FANCLQ9NW38 375 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 DSEQ9UL01 958 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 AGAP1Q9UPQ3 857 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 TRIM38O00635 465 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 IDH3BO43837 385 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 ATF2P15336 505 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 CDC27P30260 824 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 SCRN1Q12765 414 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 VPS50Q96JG6 964 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 NLRP3Q96P20 1036 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 CALN1Q9BXU9 219 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 TYW1Q9NV66 732 aaKnown RBP11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 COPG2Q9UBF2 871 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 FAM25EA8MYX2 175 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 SASH1O94885 1247 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 GPR139Q6DWJ6 353 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 THOC7Q6I9Y2 204 aaKnown RBP11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 ATXN7L3BQ96GX2 97 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 GMCL1Q96IK5 515 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 DCAF5Q96JK2 942 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 ERAP1Q9NZ08 941 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 NIP7Q9Y221 180 aaKnown RBP eCLIP11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 GNPATO15228 680 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 ARHGAP6O43182 974 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 ZNF806P0C7X5 589 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 ATP5JP18859 108 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 ITGA6P23229 1130 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 PSEN1P49768 467 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 MIER2Q8N344 545 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 FAM133AQ8N9E0 248 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 EEF2KMTQ96G04 330 aa11.42□□□□□ -0.58
CNTNAP3B-211ENST00000612828 PPM1AP35813 382 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 ERFP50548 548 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 LRRC24Q50LG9 513 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 LRRC8EQ6NSJ5 796 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 CCDC24Q8N4L8 307 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 SRFBP1Q8NEF9 429 aaKnown RBP11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 COG1Q8WTW3 980 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 CCDC127Q96BQ5 260 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 TBATAQ96M53 351 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 SLC13A1Q9BZW2 595 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 DPCR1Q3MIW9 517 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 CENPPQ6IPU0 288 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 IZUMO2Q6UXV1 221 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 FAM47EQ6ZV65 393 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 U2AF1L4Q8WU68 220 aaKnown RBP11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 CKAP2Q8WWK9 683 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 APPBP2Q92624 585 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 TBC1D10AQ9BXI6 508 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 LDHBP07195 334 aaKnown RBP11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 CERCAMQ5T4B2 595 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 ATL3Q6DD88 541 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 USB1Q9BQ65 265 aaKnown RBP11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 SEMA3GQ9NS98 782 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 VPS54Q9P1Q0 977 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 FAM50BQ9Y247 325 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 THRAP3Q9Y2W1 955 aaKnown RBP11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 ATP10AO60312 1499 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 DENND3A2RUS2 1198 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 NEURL1BA8MQ27 555 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 LRRC36Q1X8D7 754 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 SLFNL1Q499Z3 407 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 MICALL2Q8IY33 904 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 TRIM58Q8NG06 486 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 PCDHB9Q9Y5E1 797 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 SNX13Q9Y5W8 968 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 ETF1P62495 437 aaKnown RBP11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 SCARA5Q6ZMJ2 495 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 PLBD2Q8NHP8 589 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 EXOC4Q96A65 974 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 CUEDC1Q9NWM3 386 aaPredicted RBP11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 SEPT3Q9UH03 358 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 DYRK3O43781 588 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 CAND2O75155 1236 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 BMP15O95972 392 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 TBC1D8BQ0IIM8 1120 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 RNF44Q7L0R7 432 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 PROSER1Q86XN7 944 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 LRRC71Q8N4P6 559 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 DDX50Q9BQ39 737 aaKnown RBP11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 NUP58Q9BVL2 599 aa11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 TEX13AQ9BXU3 409 aaPredicted RBP11.41□□□□□ -0.58
CNTNAP3B-211ENST00000612828 UBE2OQ9C0C9 1292 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms