RNA–Protein interactions for RNA: ENST00000611969.4

LINC00116-203, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LINC00116, Length 441 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-203ENST00000611969 MTSS1LQ765P7 747 aa15.33■□□□□ 0.04
LINC00116-203ENST00000611969 RDM1Q8NG50 284 aa15.33■□□□□ 0.04
LINC00116-203ENST00000611969 PRPF31Q8WWY3 499 aaKnown RBP15.33■□□□□ 0.04
LINC00116-203ENST00000611969 TMEM143Q96AN5 459 aa15.33■□□□□ 0.04
LINC00116-203ENST00000611969 CLDN23Q96B33 292 aa15.33■□□□□ 0.04
LINC00116-203ENST00000611969 BORCS6Q96GS4 357 aa15.33■□□□□ 0.04
LINC00116-203ENST00000611969 NCOA5Q9HCD5 579 aaKnown RBP15.33■□□□□ 0.04
LINC00116-203ENST00000611969 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.33■□□□□ 0.04
LINC00116-203ENST00000611969 FNIP2Q9P278 1114 aa15.33■□□□□ 0.04
LINC00116-203ENST00000611969 GMEB2Q9UKD1 530 aa15.33■□□□□ 0.04
LINC00116-203ENST00000611969 PDCD11Q14690 1871 aaKnown RBP15.33■□□□□ 0.04
LINC00116-203ENST00000611969 TSPAN1O60635 241 aa15.32■□□□□ 0.04
LINC00116-203ENST00000611969 C1RP00736 705 aa15.32■□□□□ 0.04
LINC00116-203ENST00000611969 TDGF1P13385 188 aa15.32■□□□□ 0.04
LINC00116-203ENST00000611969 MAGEA9P43362 315 aa15.32■□□□□ 0.04
LINC00116-203ENST00000611969 MTAPQ13126 283 aa15.32■□□□□ 0.04
LINC00116-203ENST00000611969 FZD5Q13467 585 aa15.32■□□□□ 0.04
LINC00116-203ENST00000611969 ANKRD1Q15327 319 aa15.32■□□□□ 0.04
LINC00116-203ENST00000611969 USP41Q3LFD5 358 aa15.32■□□□□ 0.04
LINC00116-203ENST00000611969 ZBTB41Q5SVQ8 909 aa15.32■□□□□ 0.04
LINC00116-203ENST00000611969 SRGAP1Q7Z6B7 1085 aa15.32■□□□□ 0.04
LINC00116-203ENST00000611969 NPAS3Q8IXF0 933 aa15.32■□□□□ 0.04
LINC00116-203ENST00000611969 GSTCDQ8NEC7 633 aa15.32■□□□□ 0.04
LINC00116-203ENST00000611969 CPB2Q96IY4 423 aa15.32■□□□□ 0.04
LINC00116-203ENST00000611969 CHAMP1Q96JM3 812 aa15.32■□□□□ 0.04
LINC00116-203ENST00000611969 PHF20Q9BVI0 1012 aa15.32■□□□□ 0.04
LINC00116-203ENST00000611969 NXF3Q9H4D5 531 aaKnown RBP15.32■□□□□ 0.04
LINC00116-203ENST00000611969 HCFC1R1Q9NWW0 138 aa15.32■□□□□ 0.04
LINC00116-203ENST00000611969 WRAP73Q9P2S5 460 aaPredicted RBP15.32■□□□□ 0.04
LINC00116-203ENST00000611969 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.31■□□□□ 0.04
LINC00116-203ENST00000611969 SLC30A4O14863 429 aa15.31■□□□□ 0.04
LINC00116-203ENST00000611969 ADAM12O43184 909 aa15.31■□□□□ 0.04
LINC00116-203ENST00000611969 TBC1D4O60343 1298 aa15.31■□□□□ 0.04
LINC00116-203ENST00000611969 CENPBP07199 599 aaPredicted RBP15.31■□□□□ 0.04
LINC00116-203ENST00000611969 C8AP07357 584 aa15.31■□□□□ 0.04
LINC00116-203ENST00000611969 LAMTOR4Q0VGL1 99 aa15.31■□□□□ 0.04
LINC00116-203ENST00000611969 RSPO2Q6UXX9 243 aaPredicted RBP15.31■□□□□ 0.04
LINC00116-203ENST00000611969 HASPINQ8TF76 798 aa15.31■□□□□ 0.04
LINC00116-203ENST00000611969 ING5Q8WYH8 240 aa15.31■□□□□ 0.04
LINC00116-203ENST00000611969 PAAF1Q9BRP4 392 aa15.31■□□□□ 0.04
LINC00116-203ENST00000611969 COLEC11Q9BWP8 271 aa15.31■□□□□ 0.04
LINC00116-203ENST00000611969 UBN1Q9NPG3 1134 aa15.31■□□□□ 0.04
LINC00116-203ENST00000611969 HEBP1Q9NRV9 189 aa15.31■□□□□ 0.04
LINC00116-203ENST00000611969 VPS54Q9P1Q0 977 aa15.31■□□□□ 0.04
LINC00116-203ENST00000611969 ADAM28Q9UKQ2 775 aa15.31■□□□□ 0.04
LINC00116-203ENST00000611969 PCDHA4Q9UN74 947 aa15.31■□□□□ 0.04
LINC00116-203ENST00000611969 POLIQ9UNA4 740 aa15.31■□□□□ 0.04
LINC00116-203ENST00000611969 EML1O00423 815 aa15.3■□□□□ 0.04
LINC00116-203ENST00000611969 ERLIN2O94905 339 aa15.3■□□□□ 0.04
LINC00116-203ENST00000611969 XBP1P17861 261 aa15.3■□□□□ 0.04
LINC00116-203ENST00000611969 RPS9P46781 194 aaKnown RBP15.3■□□□□ 0.04
LINC00116-203ENST00000611969 PSMC5P62195 406 aa15.3■□□□□ 0.04
LINC00116-203ENST00000611969 PFKPQ01813 784 aa15.3■□□□□ 0.04
LINC00116-203ENST00000611969 CREMQ03060 361 aa15.3■□□□□ 0.04
LINC00116-203ENST00000611969 Q4G0T1 1027 aa15.3■□□□□ 0.04
LINC00116-203ENST00000611969 PPM1LQ5SGD2 360 aa15.3■□□□□ 0.04
LINC00116-203ENST00000611969 LIN9Q5TKA1 542 aa15.3■□□□□ 0.04
LINC00116-203ENST00000611969 POTEHQ6S545 545 aa15.3■□□□□ 0.04
LINC00116-203ENST00000611969 GPR65Q8IYL9 337 aa15.3■□□□□ 0.04
LINC00116-203ENST00000611969 RNF149Q8NC42 400 aa15.3■□□□□ 0.04
LINC00116-203ENST00000611969 CNNM3Q8NE01 707 aa15.3■□□□□ 0.04
LINC00116-203ENST00000611969 ETNPPLQ8TBG4 499 aa15.3■□□□□ 0.04
LINC00116-203ENST00000611969 NETO1Q8TDF5 533 aa15.3■□□□□ 0.04
LINC00116-203ENST00000611969 PSPC1Q8WXF1 523 aaKnown RBP15.3■□□□□ 0.04
LINC00116-203ENST00000611969 SLC7A3Q8WY07 619 aa15.3■□□□□ 0.04
LINC00116-203ENST00000611969 CLSTN3Q9BQT9 956 aa15.3■□□□□ 0.04
LINC00116-203ENST00000611969 JPH2Q9BR39 696 aaPredicted RBP15.3■□□□□ 0.04
LINC00116-203ENST00000611969 PLA2G2FQ9BZM2 168 aa15.3■□□□□ 0.04
LINC00116-203ENST00000611969 DHX33Q9H6R0 707 aaKnown RBP15.3■□□□□ 0.04
LINC00116-203ENST00000611969 GREB1Q4ZG55 1949 aa15.29■□□□□ 0.04
LINC00116-203ENST00000611969 HNRNPA1P09651 372 aaKnown RBP eCLIP15.29■□□□□ 0.04
LINC00116-203ENST00000611969 KCNA4P22459 653 aa15.29■□□□□ 0.04
LINC00116-203ENST00000611969 AKAP5P24588 427 aa15.29■□□□□ 0.04
LINC00116-203ENST00000611969 BLIDQ8IZY5 108 aa15.29■□□□□ 0.04
LINC00116-203ENST00000611969 ZNF687Q8N1G0 1237 aa15.29■□□□□ 0.04
LINC00116-203ENST00000611969 DAGLBQ8NCG7 672 aa15.29■□□□□ 0.04
LINC00116-203ENST00000611969 SLC7A14Q8TBB6 771 aa15.29■□□□□ 0.04
LINC00116-203ENST00000611969 TBCKQ8TEA7 893 aa15.29■□□□□ 0.04
LINC00116-203ENST00000611969 SLKQ9H2G2 1235 aaPredicted RBP15.29■□□□□ 0.04
LINC00116-203ENST00000611969 KLK14Q9P0G3 267 aa15.29■□□□□ 0.04
LINC00116-203ENST00000611969 SF3B1O75533 1304 aaKnown RBP eCLIP15.28■□□□□ 0.04
LINC00116-203ENST00000611969 CYP3A7-CYP3A51PA0A087WV96 503 aa15.28■□□□□ 0.04
LINC00116-203ENST00000611969 NR1I2O75469 434 aa15.28■□□□□ 0.04
LINC00116-203ENST00000611969 CYP3A7P24462 503 aa15.28■□□□□ 0.04
LINC00116-203ENST00000611969 EMC2Q15006 297 aa15.28■□□□□ 0.04
LINC00116-203ENST00000611969 PSMD5Q16401 504 aa15.28■□□□□ 0.04
LINC00116-203ENST00000611969 SLC5A9Q2M3M2 681 aa15.28■□□□□ 0.04
LINC00116-203ENST00000611969 LAIR1Q6GTX8 287 aa15.28■□□□□ 0.04
LINC00116-203ENST00000611969 NOTUMQ6P988 496 aa15.28■□□□□ 0.04
LINC00116-203ENST00000611969 MOXD1Q6UVY6 613 aa15.28■□□□□ 0.04
LINC00116-203ENST00000611969 FERMT3Q86UX7 667 aa15.28■□□□□ 0.04
LINC00116-203ENST00000611969 CDR2LQ86X02 465 aaPredicted RBP15.28■□□□□ 0.04
LINC00116-203ENST00000611969 CEP170P1Q96L14 293 aa15.28■□□□□ 0.04
LINC00116-203ENST00000611969 CSRNP2Q9H175 543 aa15.28■□□□□ 0.04
LINC00116-203ENST00000611969 DNMT3BQ9UBC3 853 aaKnown RBP15.28■□□□□ 0.04
LINC00116-203ENST00000611969 VAV3Q9UKW4 847 aa15.28■□□□□ 0.04
LINC00116-203ENST00000611969 NDRG2Q9UN36 371 aaKnown RBP15.28■□□□□ 0.04
LINC00116-203ENST00000611969 FAM208BQ5VWN6 2430 aa15.28■□□□□ 0.04
LINC00116-203ENST00000611969 F5P12259 2224 aa15.27■□□□□ 0.04
LINC00116-203ENST00000611969 B4GALT5O43286 388 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms