RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 ARHGEF18Q6ZSZ5 1173 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 PLEKHH3Q7Z736 793 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 TEX2Q8IWB9 1127 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 ZMYND15Q9H091 742 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 C17orf75Q9HAS0 396 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 PRMT7Q9NVM4 692 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-218ENST00000610726 KLHL11Q9NVR0 708 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 NOC2LQ9Y3T9 749 aaKnown RBP7.76□□□□□ -1.17
CSDE1-218ENST00000610726 LMO7Q8WWI1 1683 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 EXTL3O43909 919 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 INHBAP08476 426 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 PON1P27169 355 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 GYS2P54840 703 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 APBA1Q02410 837 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 KCNA1Q09470 495 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 IL17AQ16552 155 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 ZSCAN26Q16670 478 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 KIZQ2M2Z5 673 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 SGSM1Q2NKQ1 1148 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 C2CD6Q53TS8 623 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 GLRA4Q5JXX5 417 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 C1orf54Q8WWF1 131 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 RNPC3Q96LT9 517 aaKnown RBP7.75□□□□□ -1.17
CSDE1-218ENST00000610726 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.75□□□□□ -1.17
CSDE1-218ENST00000610726 RANBP17Q9H2T7 1088 aaKnown RBP7.75□□□□□ -1.17
CSDE1-218ENST00000610726 PRKAG2Q9UGJ0 569 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 VTNP04004 478 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 ANXA13P27216 316 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 GCLCP48506 637 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-218ENST00000610726 RBP5P82980 135 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 PDE1BQ01064 536 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 NAB2Q15742 525 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 CC2D1AQ6P1N0 951 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-218ENST00000610726 DNAAF5Q86Y56 855 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 NLGN2Q8NFZ4 835 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 RBM41Q96IZ5 413 aaKnown RBP7.75□□□□□ -1.17
CSDE1-218ENST00000610726 CAMKK2Q96RR4 588 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 FAM49BQ9NUQ9 324 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 ASNSD1Q9NWL6 643 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 FNDC3AQ9Y2H6 1198 aaKnown RBP7.75□□□□□ -1.17
CSDE1-218ENST00000610726 I3L4J1 428 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 ATP8B1O43520 1251 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 KRT3P12035 628 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 ELF1P32519 619 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 NT5DC1Q5TFE4 455 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 EMBQ6PCB8 327 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 METTL7BQ6UX53 244 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 TRIM72Q6ZMU5 477 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 TRIM59Q8IWR1 403 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 IL31RAQ8NI17 732 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 WHAMMQ8TF30 809 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 TRAPPC12Q8WVT3 735 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 ELMO3Q96BJ8 720 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 C18orf8Q96DM3 657 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 DUSP9Q99956 384 aaKnown RBP7.75□□□□□ -1.17
CSDE1-218ENST00000610726 NOVA2Q9UNW9 492 aaKnown RBP7.75□□□□□ -1.17
CSDE1-218ENST00000610726 PCDHB2Q9Y5E7 798 aa7.75□□□□□ -1.17
CSDE1-218ENST00000610726 A0A1W2PQJ5 194 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 GOLGA8MH3BSY2 632 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 CREB3O43889 395 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 PPFIA4O75335 1185 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 TADA3O75528 432 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 RPS6KA5O75582 802 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 GRAP2O75791 330 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 SLC4A1P02730 911 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 MDM2Q00987 491 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-218ENST00000610726 NNTQ13423 1086 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 TMEM119Q4V9L6 283 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 HP1BP3Q5SSJ5 553 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-218ENST00000610726 SH3BP5LQ7L8J4 393 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 RHOT1Q8IXI2 618 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 PDIK1LQ8N165 341 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 THEM5Q8N1Q8 247 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 SLC5A5Q92911 643 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 LRRC1Q9BTT6 524 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 LACRTQ9GZZ8 138 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 INTS9Q9NV88 658 aaKnown RBP7.74□□□□□ -1.17
CSDE1-218ENST00000610726 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.74□□□□□ -1.17
CSDE1-218ENST00000610726 KLK14Q9P0G3 267 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 POLIQ9UNA4 740 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 SLIT2O94813 1529 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 PHLPP1O60346 1717 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 ASTN2O75129 1339 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-218ENST00000610726 LCP1P13796 627 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 MUTP22033 750 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 GUCY2CP25092 1073 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 ZNF131P52739 623 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 VSNL1P62760 191 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 TSPY1Q01534 308 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 SH3RF1Q7Z6J0 888 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 REXO1L1PQ8IX06 675 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 SAMD3Q8N6K7 520 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 DNERQ8NFT8 737 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 TAS1R2Q8TE23 839 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 ZNF560Q96MR9 790 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 ZBED2Q9BTP6 218 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 OLFML3Q9NRN5 406 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 IP6K2Q9UHH9 426 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 SLC12A6Q9UHW9 1150 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 ROBO1Q9Y6N7 1651 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms