RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 CASTOR2A6NHX0 329 aa21.09■□□□□ 0.97
CTSA-217ENST00000607482 H0YCG3 227 aa21.09■□□□□ 0.97
CTSA-217ENST00000607482 HARSP12081 509 aaKnown RBP21.09■□□□□ 0.97
CTSA-217ENST00000607482 PLS3P13797 630 aa21.09■□□□□ 0.97
CTSA-217ENST00000607482 EPCAMP16422 314 aa21.09■□□□□ 0.97
CTSA-217ENST00000607482 TXLNAP40222 546 aa21.09■□□□□ 0.97
CTSA-217ENST00000607482 KCNC3Q14003 757 aa21.09■□□□□ 0.97
CTSA-217ENST00000607482 HSP90AA2PQ14568 343 aaPredicted RBP21.09■□□□□ 0.97
CTSA-217ENST00000607482 USP41Q3LFD5 358 aa21.09■□□□□ 0.97
CTSA-217ENST00000607482 ATAT1Q5SQI0 421 aa21.09■□□□□ 0.97
CTSA-217ENST00000607482 EEF1DP3Q658K8 133 aa21.09■□□□□ 0.97
CTSA-217ENST00000607482 SYCE2Q6PIF2 218 aa21.09■□□□□ 0.97
CTSA-217ENST00000607482 RNF135Q8IUD6 432 aa21.09■□□□□ 0.97
CTSA-217ENST00000607482 HSCBQ8IWL3 235 aa21.09■□□□□ 0.97
CTSA-217ENST00000607482 KHSRPQ92945 711 aaKnown RBP eCLIP21.09■□□□□ 0.97
CTSA-217ENST00000607482 BICD1Q96G01 975 aa21.09■□□□□ 0.97
CTSA-217ENST00000607482 NECTIN4Q96NY8 510 aa21.09■□□□□ 0.97
CTSA-217ENST00000607482 KLHL5Q96PQ7 755 aa21.09■□□□□ 0.97
CTSA-217ENST00000607482 HERC2P3Q9BVR0 1158 aa21.09■□□□□ 0.97
CTSA-217ENST00000607482 VN1R3Q9BXE9 311 aa21.09■□□□□ 0.97
CTSA-217ENST00000607482 ADAM7Q9H2U9 754 aa21.09■□□□□ 0.97
CTSA-217ENST00000607482 MARCH5Q9NX47 278 aa21.09■□□□□ 0.97
CTSA-217ENST00000607482 CCDC39Q9UFE4 941 aa21.09■□□□□ 0.97
CTSA-217ENST00000607482 ADAM28Q9UKQ2 775 aa21.09■□□□□ 0.97
CTSA-217ENST00000607482 TNFSF13BQ9Y275 285 aa21.09■□□□□ 0.97
CTSA-217ENST00000607482 NR2E1Q9Y466 385 aa21.09■□□□□ 0.97
CTSA-217ENST00000607482 FAM86C2PA6NEL3 165 aa21.08■□□□□ 0.97
CTSA-217ENST00000607482 CNPP09543 421 aaKnown RBP21.08■□□□□ 0.97
CTSA-217ENST00000607482 COL9A1P20849 921 aa21.08■□□□□ 0.97
CTSA-217ENST00000607482 MTHFRP42898 656 aa21.08■□□□□ 0.97
CTSA-217ENST00000607482 SLC12A3P55017 1021 aa21.08■□□□□ 0.97
CTSA-217ENST00000607482 OSTNP61366 133 aa21.08■□□□□ 0.97
CTSA-217ENST00000607482 GPBP1Q86WP2 473 aa21.08■□□□□ 0.97
CTSA-217ENST00000607482 DAW1Q8N136 415 aa21.08■□□□□ 0.97
CTSA-217ENST00000607482 S1PR5Q9H228 398 aa21.08■□□□□ 0.97
CTSA-217ENST00000607482 SF3B1O75533 1304 aaKnown RBP eCLIP21.07■□□□□ 0.96
CTSA-217ENST00000607482 TBCAO75347 108 aaKnown RBP21.07■□□□□ 0.96
CTSA-217ENST00000607482 FAM13AO94988 1023 aa21.07■□□□□ 0.96
CTSA-217ENST00000607482 SP100P23497 879 aaPredicted RBP21.07■□□□□ 0.96
CTSA-217ENST00000607482 CREMQ03060 361 aa21.07■□□□□ 0.96
CTSA-217ENST00000607482 KARSQ15046 597 aaKnown RBP21.07■□□□□ 0.96
CTSA-217ENST00000607482 TMEM119Q4V9L6 283 aa21.07■□□□□ 0.96
CTSA-217ENST00000607482 FUT10Q6P4F1 479 aa21.07■□□□□ 0.96
CTSA-217ENST00000607482 TAS1R1Q7RTX1 841 aa21.07■□□□□ 0.96
CTSA-217ENST00000607482 MYCT1Q8N699 235 aa21.07■□□□□ 0.96
CTSA-217ENST00000607482 C12orf76Q8N812 135 aaPredicted RBP21.07■□□□□ 0.96
CTSA-217ENST00000607482 GSTCDQ8NEC7 633 aa21.07■□□□□ 0.96
CTSA-217ENST00000607482 HASPINQ8TF76 798 aa21.07■□□□□ 0.96
CTSA-217ENST00000607482 SPIRE2Q8WWL2 714 aa21.07■□□□□ 0.96
CTSA-217ENST00000607482 SUSD6Q92537 303 aa21.07■□□□□ 0.96
CTSA-217ENST00000607482 FBXL18Q96ME1 805 aa21.07■□□□□ 0.96
CTSA-217ENST00000607482 ACO2Q99798 780 aaKnown RBP21.07■□□□□ 0.96
CTSA-217ENST00000607482 TARS2Q9BW92 718 aaKnown RBP21.07■□□□□ 0.96
CTSA-217ENST00000607482 ARHGAP28Q9P2N2 729 aa21.07■□□□□ 0.96
CTSA-217ENST00000607482 ANKFY1Q9P2R3 1169 aa21.07■□□□□ 0.96
CTSA-217ENST00000607482 MUTYHQ9UIF7 546 aa21.07■□□□□ 0.96
CTSA-217ENST00000607482 GTF3C3Q9Y5Q9 886 aa21.07■□□□□ 0.96
CTSA-217ENST00000607482 CLIC4Q9Y696 253 aa21.07■□□□□ 0.96
CTSA-217ENST00000607482 C5orf42Q9H799 3197 aa21.07■□□□□ 0.96
CTSA-217ENST00000607482 NPHP3-ACAD11A0A0J9YXS1 232 aa21.06■□□□□ 0.96
CTSA-217ENST00000607482 F8W810 466 aa21.06■□□□□ 0.96
CTSA-217ENST00000607482 PLCG1P19174 1290 aa21.06■□□□□ 0.96
CTSA-217ENST00000607482 MARCKSP29966 332 aaPredicted RBP21.06■□□□□ 0.96
CTSA-217ENST00000607482 CACNB1Q02641 598 aaPredicted RBP21.06■□□□□ 0.96
CTSA-217ENST00000607482 TMC5Q6UXY8 1006 aa21.06■□□□□ 0.96
CTSA-217ENST00000607482 CEP57Q86XR8 500 aa21.06■□□□□ 0.96
CTSA-217ENST00000607482 RIN2Q8WYP3 895 aaPredicted RBP21.06■□□□□ 0.96
CTSA-217ENST00000607482 ACAP3Q96P50 834 aa21.06■□□□□ 0.96
CTSA-217ENST00000607482 ZSCAN16Q9H4T2 348 aaPredicted RBP21.06■□□□□ 0.96
CTSA-217ENST00000607482 SFXN1Q9H9B4 322 aa21.06■□□□□ 0.96
CTSA-217ENST00000607482 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.06■□□□□ 0.96
CTSA-217ENST00000607482 TDRD15B5MCY1 1934 aaKnown RBP21.06■□□□□ 0.96
CTSA-217ENST00000607482 STX6O43752 255 aa21.05■□□□□ 0.96
CTSA-217ENST00000607482 GPR37L1O60883 481 aa21.05■□□□□ 0.96
CTSA-217ENST00000607482 GLUD1P00367 558 aa21.05■□□□□ 0.96
CTSA-217ENST00000607482 EDN1P05305 212 aa21.05■□□□□ 0.96
CTSA-217ENST00000607482 WEE2P0C1S8 567 aa21.05■□□□□ 0.96
CTSA-217ENST00000607482 MCF2P10911 925 aa21.05■□□□□ 0.96
CTSA-217ENST00000607482 ELAVL2Q12926 359 aaKnown RBP21.05■□□□□ 0.96
CTSA-217ENST00000607482 MAPK7Q13164 816 aa21.05■□□□□ 0.96
CTSA-217ENST00000607482 GLRA4Q5JXX5 417 aa21.05■□□□□ 0.96
CTSA-217ENST00000607482 MPZL3Q6UWV2 235 aa21.05■□□□□ 0.96
CTSA-217ENST00000607482 SLC22A17Q8WUG5 538 aa21.05■□□□□ 0.96
CTSA-217ENST00000607482 B3GALT6Q96L58 329 aa21.05■□□□□ 0.96
CTSA-217ENST00000607482 NTPCRQ9BSD7 190 aaKnown RBP21.05■□□□□ 0.96
CTSA-217ENST00000607482 LRFN3Q9BTN0 628 aa21.05■□□□□ 0.96
CTSA-217ENST00000607482 CACNG4Q9UBN1 327 aa21.05■□□□□ 0.96
CTSA-217ENST00000607482 ODF2LQ9ULJ1 636 aa21.05■□□□□ 0.96
CTSA-217ENST00000607482 HCN4Q9Y3Q4 1203 aa21.05■□□□□ 0.96
CTSA-217ENST00000607482 LOC730098B7Z3J9 87 aa21.04■□□□□ 0.96
CTSA-217ENST00000607482 PTGESO14684 152 aa21.04■□□□□ 0.96
CTSA-217ENST00000607482 TEX28O15482 410 aa21.04■□□□□ 0.96
CTSA-217ENST00000607482 GRM5P41594 1212 aa21.04■□□□□ 0.96
CTSA-217ENST00000607482 CLCN4P51793 760 aa21.04■□□□□ 0.96
CTSA-217ENST00000607482 DSG1Q02413 1049 aa21.04■□□□□ 0.96
CTSA-217ENST00000607482 MCM6Q14566 821 aa21.04■□□□□ 0.96
CTSA-217ENST00000607482 FAM171A1Q5VUB5 890 aa21.04■□□□□ 0.96
CTSA-217ENST00000607482 KIAA0319Q5VV43 1072 aa21.04■□□□□ 0.96
CTSA-217ENST00000607482 PALB2Q86YC2 1186 aa21.04■□□□□ 0.96
CTSA-217ENST00000607482 GLYCTKQ8IVS8 523 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms