RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 UBXN11Q5T124 520 aa17.94■□□□□ 0.46
PMF1-206ENST00000606952 SPECC1LQ69YQ0 1117 aa17.94■□□□□ 0.46
PMF1-206ENST00000606952 UBE2Q1Q7Z7E8 422 aa17.94■□□□□ 0.46
PMF1-206ENST00000606952 TCHPQ9BT92 498 aa17.94■□□□□ 0.46
PMF1-206ENST00000606952 C11orf49Q9H6J7 331 aa17.94■□□□□ 0.46
PMF1-206ENST00000606952 RBAKQ9NYW8 714 aaPredicted RBP17.94■□□□□ 0.46
PMF1-206ENST00000606952 SIK3Q9Y2K2 1263 aa17.94■□□□□ 0.46
PMF1-206ENST00000606952 LRRIQ3A6PVS8 624 aaPredicted RBP17.93■□□□□ 0.46
PMF1-206ENST00000606952 SELPP16109 830 aa17.93■□□□□ 0.46
PMF1-206ENST00000606952 MATR3P43243 847 aaKnown RBP eCLIP17.93■□□□□ 0.461e-6■■■□□ 15
PMF1-206ENST00000606952 FMO5P49326 533 aa17.93■□□□□ 0.46
PMF1-206ENST00000606952 ACOT2P49753 483 aa17.93■□□□□ 0.46
PMF1-206ENST00000606952 TBX2Q13207 712 aaPredicted RBP17.93■□□□□ 0.46
PMF1-206ENST00000606952 DSC3Q14574 896 aa17.93■□□□□ 0.46
PMF1-206ENST00000606952 FIGNQ5HY92 759 aa17.93■□□□□ 0.46
PMF1-206ENST00000606952 LRRC8DQ7L1W4 858 aa17.93■□□□□ 0.46
PMF1-206ENST00000606952 ZBTB33Q86T24 672 aa17.93■□□□□ 0.46
PMF1-206ENST00000606952 CREBRFQ8IUR6 639 aa17.93■□□□□ 0.46
PMF1-206ENST00000606952 RDH13Q8NBN7 331 aa17.93■□□□□ 0.46
PMF1-206ENST00000606952 IQCDQ96DY2 449 aa17.93■□□□□ 0.46
PMF1-206ENST00000606952 AGO3Q9H9G7 860 aaKnown RBP17.93■□□□□ 0.46
PMF1-206ENST00000606952 ST3GAL5Q9UNP4 418 aa17.93■□□□□ 0.46
PMF1-206ENST00000606952 IL18RAPO95256 599 aa17.92■□□□□ 0.46
PMF1-206ENST00000606952 PARNO95453 639 aaKnown RBP17.92■□□□□ 0.46
PMF1-206ENST00000606952 TNFSF9P41273 254 aa17.92■□□□□ 0.46
PMF1-206ENST00000606952 DLG4P78352 724 aa17.92■□□□□ 0.46
PMF1-206ENST00000606952 PPP3CAQ08209 521 aa17.92■□□□□ 0.46
PMF1-206ENST00000606952 FAAP100Q0VG06 881 aa17.92■□□□□ 0.46
PMF1-206ENST00000606952 TRIM14Q14142 442 aa17.92■□□□□ 0.46
PMF1-206ENST00000606952 MBTPS1Q14703 1052 aa17.92■□□□□ 0.46
PMF1-206ENST00000606952 TMEM132AQ24JP5 1023 aa17.92■□□□□ 0.46
PMF1-206ENST00000606952 DCAF17Q5H9S7 520 aaPredicted RBP17.92■□□□□ 0.46
PMF1-206ENST00000606952 C15orf39Q6ZRI6 1047 aa17.92■□□□□ 0.46
PMF1-206ENST00000606952 CDR2LQ86X02 465 aaPredicted RBP17.92■□□□□ 0.46
PMF1-206ENST00000606952 CGRRF1Q99675 332 aa17.92■□□□□ 0.46
PMF1-206ENST00000606952 PIN4Q9Y237 131 aaKnown RBP17.92■□□□□ 0.46
PMF1-206ENST00000606952 COQ4Q9Y3A0 265 aa17.92■□□□□ 0.46
PMF1-206ENST00000606952 DCDC2CA8MYV0 355 aa17.91■□□□□ 0.46
PMF1-206ENST00000606952 TRIM49P0CI25 452 aa17.91■□□□□ 0.46
PMF1-206ENST00000606952 TRIM49CP0CI26 452 aa17.91■□□□□ 0.46
PMF1-206ENST00000606952 STAG3L1P0CL83 205 aa17.91■□□□□ 0.46
PMF1-206ENST00000606952 GHRP10912 638 aa17.91■□□□□ 0.46
PMF1-206ENST00000606952 AP3M2P53677 418 aa17.91■□□□□ 0.46
PMF1-206ENST00000606952 WNT7BP56706 349 aa17.91■□□□□ 0.46
PMF1-206ENST00000606952 KCNMA1Q12791 1236 aa17.91■□□□□ 0.46
PMF1-206ENST00000606952 ENOX2Q16206 610 aaKnown RBP17.91■□□□□ 0.46
PMF1-206ENST00000606952 TRIM60Q495X7 471 aa17.91■□□□□ 0.46
PMF1-206ENST00000606952 TCERG1LQ5VWI1 586 aa17.91■□□□□ 0.46
PMF1-206ENST00000606952 DPY19L2P1Q6NXN4 242 aa17.91■□□□□ 0.46
PMF1-206ENST00000606952 NECAB2Q7Z6G3 386 aa17.91■□□□□ 0.46
PMF1-206ENST00000606952 CD302Q8IX05 232 aa17.91■□□□□ 0.46
PMF1-206ENST00000606952 CEP120Q8N960 986 aa17.91■□□□□ 0.46
PMF1-206ENST00000606952 PAWRQ96IZ0 340 aaKnown RBP17.91■□□□□ 0.46
PMF1-206ENST00000606952 EIF2AQ9BY44 585 aaKnown RBP17.91■□□□□ 0.46
PMF1-206ENST00000606952 TTYH3Q9C0H2 523 aa17.91■□□□□ 0.46
PMF1-206ENST00000606952 ASB7Q9H672 318 aa17.91■□□□□ 0.46
PMF1-206ENST00000606952 PLEKHA5Q9HAU0 1116 aa17.91■□□□□ 0.46
PMF1-206ENST00000606952 TMEM8AQ9HCN3 771 aa17.91■□□□□ 0.46
PMF1-206ENST00000606952 PLCB1Q9NQ66 1216 aa17.91■□□□□ 0.46
PMF1-206ENST00000606952 TBX21Q9UL17 535 aa17.91■□□□□ 0.46
PMF1-206ENST00000606952 PADI3Q9ULW8 664 aa17.91■□□□□ 0.46
PMF1-206ENST00000606952 DAAM1Q9Y4D1 1078 aa17.91■□□□□ 0.46
PMF1-206ENST00000606952 TRIP11Q15643 1979 aa17.9■□□□□ 0.46
PMF1-206ENST00000606952 TTC26A0AVF1 554 aa17.9■□□□□ 0.46
PMF1-206ENST00000606952 MEFVO15553 781 aaPredicted RBP17.9■□□□□ 0.46
PMF1-206ENST00000606952 PQBP1O60828 265 aaKnown RBP17.9■□□□□ 0.46
PMF1-206ENST00000606952 NPTXRO95502 500 aa17.9■□□□□ 0.46
PMF1-206ENST00000606952 HARSP12081 509 aaKnown RBP17.9■□□□□ 0.46
PMF1-206ENST00000606952 TLE2Q04725 743 aa17.9■□□□□ 0.46
PMF1-206ENST00000606952 PAK2Q13177 524 aa17.9■□□□□ 0.46
PMF1-206ENST00000606952 SYCP1Q15431 976 aa17.9■□□□□ 0.46
PMF1-206ENST00000606952 CBWD6Q4V339 395 aa17.9■□□□□ 0.46
PMF1-206ENST00000606952 EPC2Q52LR7 807 aa17.9■□□□□ 0.46
PMF1-206ENST00000606952 XKR4Q5GH76 650 aa17.9■□□□□ 0.46
PMF1-206ENST00000606952 CBWD3Q5JTY5 395 aa17.9■□□□□ 0.46
PMF1-206ENST00000606952 CBWD5Q5RIA9 395 aa17.9■□□□□ 0.46
PMF1-206ENST00000606952 TMC6Q7Z403 805 aa17.9■□□□□ 0.46
PMF1-206ENST00000606952 NT5DC4Q86YG4 428 aa17.9■□□□□ 0.46
PMF1-206ENST00000606952 WDR49Q8IV35 697 aa17.9■□□□□ 0.46
PMF1-206ENST00000606952 THNSL1Q8IYQ7 743 aa17.9■□□□□ 0.46
PMF1-206ENST00000606952 TSPAN18Q96SJ8 248 aa17.9■□□□□ 0.46
PMF1-206ENST00000606952 NUP58Q9BVL2 599 aa17.9■□□□□ 0.46
PMF1-206ENST00000606952 CCDC94Q9BW85 323 aaPredicted RBP17.9■□□□□ 0.46
PMF1-206ENST00000606952 OSBPL7Q9BZF2 842 aa17.9■□□□□ 0.46
PMF1-206ENST00000606952 TMEM117Q9H0C3 514 aa17.9■□□□□ 0.46
PMF1-206ENST00000606952 RPF1Q9H9Y2 349 aaKnown RBP17.9■□□□□ 0.46
PMF1-206ENST00000606952 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.9■□□□□ 0.46
PMF1-206ENST00000606952 ALPK3Q96L96 1907 aa17.9■□□□□ 0.46
PMF1-206ENST00000606952 DNAH12Q6ZR08 3092 aa17.9■□□□□ 0.46
PMF1-206ENST00000606952 ZNF623O75123 536 aa17.89■□□□□ 0.45
PMF1-206ENST00000606952 CD52P31358 61 aa17.89■□□□□ 0.45
PMF1-206ENST00000606952 DEKP35659 375 aaKnown RBP17.89■□□□□ 0.45
PMF1-206ENST00000606952 MXI1P50539 228 aa17.89■□□□□ 0.45
PMF1-206ENST00000606952 RAB27AP51159 221 aa17.89■□□□□ 0.45
PMF1-206ENST00000606952 ATN1P54259 1190 aaPredicted RBP17.89■□□□□ 0.45
PMF1-206ENST00000606952 ARID5BQ14865 1188 aa17.89■□□□□ 0.45
PMF1-206ENST00000606952 GPNMBQ14956 572 aa17.89■□□□□ 0.45
PMF1-206ENST00000606952 ZACNQ401N2 412 aa17.89■□□□□ 0.45
PMF1-206ENST00000606952 KRT39Q6A163 491 aa17.89■□□□□ 0.45
PMF1-206ENST00000606952 GBP6Q6ZN66 633 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms