RNA–Protein interactions for RNA: ENST00000606426.1

CUX2P1-201, Transcript of cut like homeobox 2 pseudogene 1, humanhuman

BASIC

Gene CUX2P1, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2P1-201ENST00000606426 MAN1B1Q9UKM7 699 aa8.17□□□□□ -1.1
CUX2P1-201ENST00000606426 TRAF3IP3Q9Y228 551 aa8.17□□□□□ -1.1
CUX2P1-201ENST00000606426 COL4A6Q14031 1691 aa8.17□□□□□ -1.1
CUX2P1-201ENST00000606426 CEP290O15078 2479 aa8.17□□□□□ -1.1
CUX2P1-201ENST00000606426 ARL5CA6NH57 179 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 ANKRD63C9JTQ0 380 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 EXTL3O43909 919 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 RECQL4O94761 1208 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 IL18RAPO95256 599 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 RB1P06400 928 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 THP07101 528 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 CA3P07451 260 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 FGFR1P11362 822 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 KCNE1P15382 129 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 AKAP5P24588 427 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 ADSSP30520 456 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 PPM1AP35813 382 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 RABGGTBP53611 331 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 TTC3P53804 2025 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 LRRC63Q05C16 580 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 PPP2R3AQ06190 1150 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 KCNA1Q09470 495 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 GRIK3Q13003 919 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 SURF1Q15526 300 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 EDRF1Q3B7T1 1238 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 XKR4Q5GH76 650 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 HABP4Q5JVS0 413 aaKnown RBP8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 CLLU1OSQ5K130 101 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 SPOUT1Q5T280 376 aaKnown RBP8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 PPP2R2DQ66LE6 453 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 FAM109BQ6ICB4 259 aaPredicted RBP8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 FOXR2Q6PJQ5 311 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 MICAL3Q7RTP6 2002 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 USP37Q86T82 979 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 NT5DC4Q86YG4 428 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 ADSSL1Q8N142 457 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 GPD1LQ8N335 351 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 MLKLQ8NB16 471 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 XXYLT1Q8NBI6 393 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 GLIS3Q8NEA6 775 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 HELQQ8TDG4 1101 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 CLP1Q92989 425 aaKnown RBP8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 LPPQ93052 612 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 ZBTB45Q96K62 511 aaPredicted RBP8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 CASD1Q96PB1 797 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 TGS1Q96RS0 853 aaKnown RBP8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 TMEM175Q9BSA9 504 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 PLVAPQ9BX97 442 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 KCTD10Q9H3F6 313 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 ASB7Q9H672 318 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 CNTN3Q9P232 1028 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 CPSF3Q9UKF6 684 aaKnown RBP8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 USP20Q9Y2K6 914 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 GDAQ9Y2T3 454 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 DERAQ9Y315 318 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 HES2Q9Y543 173 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 PCDHB12Q9Y5F1 795 aa8.16□□□□□ -1.1
CUX2P1-201ENST00000606426 MYH11P35749 1972 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 LINC01553A4QN01 128 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 ZNF233A6NK53 670 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 GRXCR1A8MXD5 290 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 TGFB1I1O43294 461 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 FAM189A1O60320 539 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 EXOC3O60645 756 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 FGFR1OPO95684 399 aaKnown RBP8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 ALDH2P05091 517 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 HOXD13P35453 343 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 MLH1P40692 756 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 PRCPP42785 496 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 ALDH7A1P49419 539 aaKnown RBP8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 OSTNP61366 133 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 FKBP3Q00688 224 aaKnown RBP8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 PAN2Q504Q3 1202 aaKnown RBP8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 ZNF697Q5TEC3 545 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 CENPPQ6IPU0 288 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 SLC39A4Q6P5W5 647 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 SASS6Q6UVJ0 657 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 ALKAL1Q6UXT8 129 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 RBM43Q6ZSC3 357 aaKnown RBP8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 TMCO2Q7Z6W1 182 aaPredicted RBP8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 BRSK2Q8IWQ3 736 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 CACTINQ8WUQ7 758 aaKnown RBP8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 ERCC4Q92889 916 aaPredicted RBP8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 DDX27Q96GQ7 796 aaKnown RBP8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 SNX27Q96L92 541 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 FBXL18Q96ME1 805 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 UROC1Q96N76 676 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 ZNF558Q96NG5 402 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 GAD1Q99259 594 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 CBWD1Q9BRT8 395 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 FAM213AQ9BRX8 229 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 C11orf84Q9BUA3 381 aaPredicted RBP8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 RNF39Q9H2S5 420 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 NKX2-4Q9H2Z4 354 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 RNF19AQ9NV58 838 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 TBC1D13Q9NVG8 400 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 RBAKQ9NYW8 714 aaPredicted RBP8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 HSPBP1Q9NZL4 362 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 INPP5FQ9Y2H2 1132 aa8.15□□□□□ -1.1
CUX2P1-201ENST00000606426 FRMD4BQ9Y2L6 1034 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms