RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 NCKAP1LP55160 1127 aa12.66□□□□□ -0.38
CCDC12-209ENST00000604164 CREMQ03060 361 aa12.66□□□□□ -0.38
CCDC12-209ENST00000604164 TPRNQ4KMQ1 711 aa12.66□□□□□ -0.38
CCDC12-209ENST00000604164 SPECC1Q5M775 1068 aa12.66□□□□□ -0.38
CCDC12-209ENST00000604164 EEF1DP3Q658K8 133 aa12.66□□□□□ -0.38
CCDC12-209ENST00000604164 KIAA1841Q6NSI8 718 aa12.66□□□□□ -0.38
CCDC12-209ENST00000604164 HAUS6Q7Z4H7 955 aa12.66□□□□□ -0.38
CCDC12-209ENST00000604164 FAM178BQ8IXR5 827 aa12.66□□□□□ -0.38
CCDC12-209ENST00000604164 GPR65Q8IYL9 337 aa12.66□□□□□ -0.38
CCDC12-209ENST00000604164 CLIC6Q96NY7 704 aa12.66□□□□□ -0.38
CCDC12-209ENST00000604164 ACAP3Q96P50 834 aa12.66□□□□□ -0.38
CCDC12-209ENST00000604164 POP1Q99575 1024 aaKnown RBP12.66□□□□□ -0.38
CCDC12-209ENST00000604164 PYM1Q9BRP8 204 aaKnown RBP12.66□□□□□ -0.38
CCDC12-209ENST00000604164 TARS2Q9BW92 718 aaKnown RBP12.66□□□□□ -0.38
CCDC12-209ENST00000604164 CUEDC2Q9H467 287 aa12.66□□□□□ -0.38
CCDC12-209ENST00000604164 ZHX3Q9H4I2 956 aa12.66□□□□□ -0.38
CCDC12-209ENST00000604164 PTPRHQ9HD43 1115 aa12.66□□□□□ -0.38
CCDC12-209ENST00000604164 SLC38A7Q9NVC3 462 aa12.66□□□□□ -0.38
CCDC12-209ENST00000604164 KLK14Q9P0G3 267 aa12.66□□□□□ -0.38
CCDC12-209ENST00000604164 SEL1LQ9UBV2 794 aa12.66□□□□□ -0.38
CCDC12-209ENST00000604164 DPP7Q9UHL4 492 aa12.66□□□□□ -0.38
CCDC12-209ENST00000604164 GDAQ9Y2T3 454 aa12.66□□□□□ -0.38
CCDC12-209ENST00000604164 PRG3Q9Y2Y8 225 aaPredicted RBP12.66□□□□□ -0.38
CCDC12-209ENST00000604164 ATP6V1DQ9Y5K8 247 aa12.66□□□□□ -0.38
CCDC12-209ENST00000604164 NPHP3-ACAD11A0A0J9YXS1 232 aa12.65□□□□□ -0.38
CCDC12-209ENST00000604164 HIDE1A8MVS5 230 aa12.65□□□□□ -0.38
CCDC12-209ENST00000604164 K7ENM7 598 aa12.65□□□□□ -0.38
CCDC12-209ENST00000604164 CLDN3O15551 220 aa12.65□□□□□ -0.38
CCDC12-209ENST00000604164 TBX10O75333 385 aa12.65□□□□□ -0.38
CCDC12-209ENST00000604164 SOD2P04179 222 aa12.65□□□□□ -0.38
CCDC12-209ENST00000604164 GAP43P17677 238 aa12.65□□□□□ -0.38
CCDC12-209ENST00000604164 PROZP22891 400 aa12.65□□□□□ -0.38
CCDC12-209ENST00000604164 MATR3P43243 847 aaKnown RBP eCLIP12.65□□□□□ -0.38
CCDC12-209ENST00000604164 LIG4P49917 911 aa12.65□□□□□ -0.38
CCDC12-209ENST00000604164 AMPD3Q01432 767 aa12.65□□□□□ -0.38
CCDC12-209ENST00000604164 ELAVL2Q12926 359 aaKnown RBP12.65□□□□□ -0.38
CCDC12-209ENST00000604164 NOLC1Q14978 699 aaKnown RBP eCLIP12.65□□□□□ -0.38
CCDC12-209ENST00000604164 TAS1R3Q7RTX0 852 aa12.65□□□□□ -0.38
CCDC12-209ENST00000604164 TMEM173Q86WV6 379 aaPredicted RBP12.65□□□□□ -0.38
CCDC12-209ENST00000604164 GSTCDQ8NEC7 633 aa12.65□□□□□ -0.38
CCDC12-209ENST00000604164 UROC1Q96N76 676 aa12.65□□□□□ -0.38
CCDC12-209ENST00000604164 HERC2P3Q9BVR0 1158 aa12.65□□□□□ -0.38
CCDC12-209ENST00000604164 CDT1Q9H211 546 aa12.65□□□□□ -0.38
CCDC12-209ENST00000604164 DZANK1Q9NVP4 752 aa12.65□□□□□ -0.38
CCDC12-209ENST00000604164 MIOSQ9NXC5 875 aa12.65□□□□□ -0.38
CCDC12-209ENST00000604164 TFIP11Q9UBB9 837 aaKnown RBP12.65□□□□□ -0.38
CCDC12-209ENST00000604164 ADAM28Q9UKQ2 775 aa12.65□□□□□ -0.38
CCDC12-209ENST00000604164 PCDHGC5Q9Y5F6 944 aa12.65□□□□□ -0.38
CCDC12-209ENST00000604164 UNC80Q8N2C7 3258 aa12.65□□□□□ -0.38
CCDC12-209ENST00000604164 SF3B1O75533 1304 aaKnown RBP eCLIP12.64□□□□□ -0.393e-6■■■■■ 41.8
CCDC12-209ENST00000604164 HNRNPDLO14979 420 aaKnown RBP12.64□□□□□ -0.39
CCDC12-209ENST00000604164 LINC01565O15544 149 aa12.64□□□□□ -0.39
CCDC12-209ENST00000604164 TADA2AO75478 443 aa12.64□□□□□ -0.39
CCDC12-209ENST00000604164 GLUD2P49448 558 aa12.64□□□□□ -0.39
CCDC12-209ENST00000604164 CACNB1Q02641 598 aaPredicted RBP12.64□□□□□ -0.39
CCDC12-209ENST00000604164 HSP90AA2PQ14568 343 aaPredicted RBP12.64□□□□□ -0.39
CCDC12-209ENST00000604164 SMAD2Q15796 467 aaKnown RBP12.64□□□□□ -0.39
CCDC12-209ENST00000604164 USP41Q3LFD5 358 aa12.64□□□□□ -0.39
CCDC12-209ENST00000604164 FOXD4L5Q5VV16 416 aaPredicted RBP12.64□□□□□ -0.39
CCDC12-209ENST00000604164 PDXDC1Q6P996 788 aa12.64□□□□□ -0.39
CCDC12-209ENST00000604164 USP49Q70CQ1 688 aa12.64□□□□□ -0.39
CCDC12-209ENST00000604164 ZBTB33Q86T24 672 aa12.64□□□□□ -0.39
CCDC12-209ENST00000604164 IQUBQ8NA54 791 aa12.64□□□□□ -0.39
CCDC12-209ENST00000604164 SPRYD3Q8NCJ5 442 aa12.64□□□□□ -0.39
CCDC12-209ENST00000604164 SMRP1Q8NCR6 262 aa12.64□□□□□ -0.39
CCDC12-209ENST00000604164 FOXD4L4Q8WXT5 416 aaPredicted RBP12.64□□□□□ -0.39
CCDC12-209ENST00000604164 DDX12PQ92771 950 aa12.64□□□□□ -0.39
CCDC12-209ENST00000604164 HVCN1Q96D96 273 aa12.64□□□□□ -0.39
CCDC12-209ENST00000604164 DDX27Q96GQ7 796 aaKnown RBP12.64□□□□□ -0.39
CCDC12-209ENST00000604164 MSLNLQ96KJ4 702 aa12.64□□□□□ -0.39
CCDC12-209ENST00000604164 ST6GALNAC4Q9H4F1 302 aa12.64□□□□□ -0.39
CCDC12-209ENST00000604164 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.64□□□□□ -0.39
CCDC12-209ENST00000604164 FAM13BQ9NYF5 915 aa12.64□□□□□ -0.39
CCDC12-209ENST00000604164 CLEC1BQ9P126 229 aa12.64□□□□□ -0.39
CCDC12-209ENST00000604164 ANKFY1Q9P2R3 1169 aa12.64□□□□□ -0.39
CCDC12-209ENST00000604164 TBX20Q9UMR3 447 aa12.64□□□□□ -0.39
CCDC12-209ENST00000604164 USP20Q9Y2K6 914 aa12.64□□□□□ -0.39
CCDC12-209ENST00000604164 PTGESO14684 152 aa12.63□□□□□ -0.39
CCDC12-209ENST00000604164 MBTPS2O43462 519 aa12.63□□□□□ -0.39
CCDC12-209ENST00000604164 TRAPPC3O43617 180 aa12.63□□□□□ -0.39
CCDC12-209ENST00000604164 B4GALT3O60512 393 aa12.63□□□□□ -0.39
CCDC12-209ENST00000604164 CLASP2O75122 1294 aaKnown RBP12.63□□□□□ -0.39
CCDC12-209ENST00000604164 GLP2RO95838 553 aa12.63□□□□□ -0.39
CCDC12-209ENST00000604164 C1RP00736 705 aa12.63□□□□□ -0.39
CCDC12-209ENST00000604164 PIGRP01833 764 aa12.63□□□□□ -0.39
CCDC12-209ENST00000604164 EDN1P05305 212 aa12.63□□□□□ -0.39
CCDC12-209ENST00000604164 ADH1AP07327 375 aa12.63□□□□□ -0.39
CCDC12-209ENST00000604164 CLTAP09496 248 aa12.63□□□□□ -0.39
CCDC12-209ENST00000604164 KLRC2P26717 231 aa12.63□□□□□ -0.39
CCDC12-209ENST00000604164 ME1P48163 572 aa12.63□□□□□ -0.39
CCDC12-209ENST00000604164 GTF2BQ00403 316 aa12.63□□□□□ -0.39
CCDC12-209ENST00000604164 ITIH3Q06033 890 aa12.63□□□□□ -0.39
CCDC12-209ENST00000604164 DLX2Q07687 328 aaPredicted RBP12.63□□□□□ -0.39
CCDC12-209ENST00000604164 MCL1Q07820 350 aa12.63□□□□□ -0.39
CCDC12-209ENST00000604164 ALCAMQ13740 583 aa12.63□□□□□ -0.39
CCDC12-209ENST00000604164 KCNC3Q14003 757 aa12.63□□□□□ -0.39
CCDC12-209ENST00000604164 PTPN14Q15678 1187 aa12.63□□□□□ -0.39
CCDC12-209ENST00000604164 CLUL1Q15846 466 aa12.63□□□□□ -0.39
CCDC12-209ENST00000604164 SLFN12LQ6IEE8 588 aa12.63□□□□□ -0.39
CCDC12-209ENST00000604164 CES5AQ6NT32 575 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms