RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 SEPT1Q8WYJ6 367 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 LZICQ8WZA0 190 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 KLF16Q9BXK1 252 aaPredicted RBP5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 BHMT2Q9H2M3 363 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 AGO4Q9HCK5 861 aaKnown RBP5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 NPHS2Q9NP85 383 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 UBN1Q9NPG3 1134 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 PLSCR4Q9NRQ2 329 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 TCP11L1Q9NUJ3 509 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 COG5Q9UP83 839 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 SRPK3Q9UPE1 567 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 EXOC7Q9UPT5 735 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 NOSIPQ9Y314 301 aaKnown RBP5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 ARHGAP10A1A4S6 786 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 FAM86C2PA6NEL3 165 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 TMEM232C9JQI7 657 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 STAMBPO95630 424 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 TUBB4AP04350 444 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 GLI3P10071 1580 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 P4HA1P13674 534 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 IDO1P14902 403 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 CD9P21926 228 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 MAPK4P31152 587 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 HSD17B2P37059 387 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 GRIK1P39086 918 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 PHEXP78562 749 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 SSPNQ14714 243 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 CCDC152Q4G0S7 254 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 IFIT1BQ5T764 474 aaKnown RBP5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 JMJD6Q6NYC1 403 aaPredicted RBP5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 RPUSD3Q6P087 351 aaKnown RBP5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 WDR73Q6P4I2 378 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 ABRAXAS1Q6UWZ7 409 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 ATF7IPQ6VMQ6 1270 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 MEX3BQ6ZN04 569 aaKnown RBP5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 RGS9BPQ6ZS82 235 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 RSPH3Q86UC2 560 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 ZBTB44Q8NCP5 570 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 SLC35G2Q8TBE7 412 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 WHAMMQ8TF30 809 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 CTNNBL1Q8WYA6 563 aaPredicted RBP5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 MAML1Q92585 1016 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 ACSF2Q96CM8 615 aaPredicted RBP5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 CAMKK2Q96RR4 588 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 ZPBPQ9BS86 351 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 OSBPL10Q9BXB5 764 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 TXLNGYQ9BZA5 131 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 ZWILCHQ9H900 591 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 KCND1Q9NSA2 647 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 ORC3Q9UBD5 711 aaPredicted RBP5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 GJD2Q9UKL4 321 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 PHF24Q9UPV7 400 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 TMED5Q9Y3A6 229 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 SPO11Q9Y5K1 396 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 PLCH1Q4KWH8 1693 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 DLC1Q96QB1 1528 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 DNAJC25-GNG10A0A024R161 153 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 A0A087WV62 115 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 KRT87PA6NCN2 255 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 H7C0S8 307 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 SMNDC1O75940 238 aaKnown RBP eCLIP5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 ZBTB48P10074 688 aaPredicted RBP5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 SCG2P13521 617 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 GAP43P17677 238 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 ATP5F1P24539 256 aaPredicted RBP5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 MCM3P25205 808 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 DPP6P42658 865 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 FNTAP49354 379 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 MAP3K10Q02779 954 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 DMPKQ09013 629 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 TMEM62Q0P6H9 643 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 NFE2L1Q14494 772 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 INAQ16352 499 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 TIGD6Q17RP2 521 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 ERCC6LQ2NKX8 1250 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 SMUG1Q53HV7 270 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 SPDYCQ5MJ68 293 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 CEP85LQ5SZL2 805 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 ELMSAN1Q6PJG2 1045 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 FGD2Q7Z6J4 655 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 PTRH1Q86Y79 214 aaKnown RBP5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 CREG2Q8IUH2 290 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 LRRC71Q8N4P6 559 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 TRIM58Q8NG06 486 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 GAS2L1Q99501 681 aaPredicted RBP5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 PUS7LQ9H0K6 701 aaKnown RBP5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 PCDHB10Q9UN67 800 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 PLEKHG1Q9ULL1 1385 aa5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 MYOM2P54296 1465 aa5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 CCDC69A6NI79 296 aa5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 GOLGA8AA7E2F4 631 aa5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 UBXN8O00124 270 aa5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 SRGAP3O43295 1099 aa5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 DNAJC8O75937 253 aaPredicted RBP5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 SASH3O75995 380 aa5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 ADRB2P07550 413 aa5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 VIMP08670 466 aaKnown RBP5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 ALOX15P16050 662 aaPredicted RBP5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 TNFSF4P23510 183 aa5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 TLX1P31314 330 aaPredicted RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms