RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 TOPORSQ9NS56 1045 aaPredicted RBP10.13□□□□□ -0.79
CSMD1-217ENST00000602723 MYH13Q9UKX3 1938 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 TTC26A0AVF1 554 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 FAM47DPA6NHR8 397 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 ZNF263O14978 683 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 GSNP06396 782 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 ERFP50548 548 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 TAP1Q03518 808 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 STXBP2Q15833 593 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 CEP78Q5JTW2 689 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 RRM2BQ7LG56 351 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 SPATA4Q8NEY3 305 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 ACAP3Q96P50 834 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 MARCOQ9UEW3 520 aaPredicted RBP10.13□□□□□ -0.79
CSMD1-217ENST00000602723 PCDHGB4Q9UN71 923 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 CCDC78A2IDD5 438 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 ZBTB5O15062 677 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 COPB2P35606 906 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 NLRP11P59045 1033 aaKnown RBP10.13□□□□□ -0.79
CSMD1-217ENST00000602723 STAT4Q14765 748 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 TRPM1Q7Z4N2 1603 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 WDR19Q8NEZ3 1342 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 TOB2Q14106 344 aaPredicted RBP10.13□□□□□ -0.79
CSMD1-217ENST00000602723 MAPK6Q16659 721 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 PFKFB3Q16875 520 aaPredicted RBP10.13□□□□□ -0.79
CSMD1-217ENST00000602723 DNAL1Q4LDG9 190 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 TRAF7Q6Q0C0 670 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 FMR1NBQ8N0W7 255 aaPredicted RBP10.13□□□□□ -0.79
CSMD1-217ENST00000602723 SERPINB3P29508 390 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 VSNL1P62760 191 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 THNSL1Q8IYQ7 743 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 MPP6Q9NZW5 540 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 AFF4Q9UHB7 1163 aaKnown RBP10.13□□□□□ -0.79
CSMD1-217ENST00000602723 AKAP10O43572 662 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 LZTS3O60299 673 aaPredicted RBP10.13□□□□□ -0.79
CSMD1-217ENST00000602723 IMPDH2P12268 514 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 C6orf10Q5SRN2 563 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 SCN4BQ8IWT1 228 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 RMDN3Q96TC7 470 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 FAM213AQ9BRX8 229 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 FAM32AQ9Y421 112 aaKnown RBP10.13□□□□□ -0.79
CSMD1-217ENST00000602723 ADCY3O60266 1144 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 HUS1O60921 280 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 AGTP01019 485 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 MDH1P40925 334 aaKnown RBP10.13□□□□□ -0.79
CSMD1-217ENST00000602723 RUNX1T1Q06455 604 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 CYLC2Q14093 348 aaPredicted RBP10.13□□□□□ -0.79
CSMD1-217ENST00000602723 TRPM8Q7Z2W7 1104 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 SH3KBP1Q96B97 665 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 CCT7Q99832 543 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 EPC1Q9H2F5 836 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 SPDYE5A6NIY4 337 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 CCND1P24385 295 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 SNAP25P60880 206 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 CCDC144BQ3MJ40 725 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 SPDYE7PQ495Y7 208 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 DDX42Q86XP3 938 aaKnown RBP eCLIP10.13□□□□□ -0.79
CSMD1-217ENST00000602723 INPP5DQ92835 1189 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 CMTM5Q96DZ9 223 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 AGBL1Q96MI9 1066 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 ARHGEF40Q8TER5 1519 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 MYO1GB0I1T2 1018 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 NME3Q13232 169 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 PGBD4Q96DM1 585 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 DHX35Q9H5Z1 703 aaKnown RBP10.13□□□□□ -0.79
CSMD1-217ENST00000602723 C10orf88Q9H8K7 445 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 PARVAQ9NVD7 372 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 PITPNM2Q9BZ72 1349 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 SLC16A4O15374 487 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 TWF2Q6IBS0 349 aaKnown RBP10.12□□□□□ -0.79
CSMD1-217ENST00000602723 ZNF556Q9HAH1 456 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 SEC31BQ9NQW1 1179 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 ZC3H7BQ9UGR2 993 aaKnown RBP10.12□□□□□ -0.79
CSMD1-217ENST00000602723 PPP1R37O75864 691 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 PRR29P0C7W0 189 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 TEX2Q8IWB9 1127 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 POLR3FQ9H1D9 316 aaPredicted RBP10.12□□□□□ -0.79
CSMD1-217ENST00000602723 SYTL2Q9HCH5 934 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 BATF3Q9NR55 127 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 AMACRQ9UHK6 382 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 EFCAB6Q5THR3 1501 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 ZFYVE16Q7Z3T8 1539 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 DENND3A2RUS2 1198 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 ORC2Q13416 577 aaPredicted RBP10.12□□□□□ -0.79
CSMD1-217ENST00000602723 DNAJC9Q8WXX5 260 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 ARHGEF1Q92888 912 aaKnown RBP10.12□□□□□ -0.79
CSMD1-217ENST00000602723 TMEM154Q6P9G4 183 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 TTC39CQ8N584 583 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 BEST2Q8NFU1 509 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 MS4A14Q96JA4 679 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 SH3GL2Q99962 352 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 TMEM161AQ9NX61 479 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 PSMC3IPQ9P2W1 217 aaPredicted RBP10.12□□□□□ -0.79
CSMD1-217ENST00000602723 CDYLQ9Y232 598 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 M0R3G1 203 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 ERFEQ4G0M1 354 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 THEMIS2Q5TEJ8 643 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 LRIG3Q6UXM1 1119 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 ANKMY2Q8IV38 441 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 ELMOD1Q8N336 334 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms