RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 ETS2P15036 469 aa16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 PEX5P50542 639 aa16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 IFI35P80217 286 aaPredicted RBP16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 CUL1Q13616 776 aa16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 DCAF17Q5H9S7 520 aaPredicted RBP16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 DENND2CQ68D51 928 aa16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 CCDC25Q86WR0 208 aa16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 DTNBP1Q96EV8 351 aa16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 EIF2AK1Q9BQI3 630 aaKnown RBP16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 CCSER1Q9C0I3 900 aa16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 RNF14Q9UBS8 474 aa16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 FEM1BQ9UK73 627 aa16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 CHMP2BQ9UQN3 213 aa16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 ESYT2A0FGR8 921 aa16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 ASAP2O43150 1006 aa16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 ATP9AO75110 1047 aa16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 FAM200BP0CF97 657 aa16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 SDCCAG8Q86SQ7 713 aaPredicted RBP16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 RAD54LQ92698 747 aa16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 ARHGEF2Q92974 986 aaKnown RBP16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 YIPF2Q9BWQ6 316 aa16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 METTL5Q9NRN9 209 aaKnown RBP16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 UTP11Q9Y3A2 253 aaKnown RBP16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 PCDHGA4Q9Y5G9 962 aa16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 KIAA1551Q9HCM1 1747 aa16.42■□□□□ 0.22
PPFIA3-206ENST00000602655 HNRNPCP07910 306 aaKnown RBP eCLIP16.42■□□□□ 0.22
PPFIA3-206ENST00000602655 ERFP50548 548 aa16.42■□□□□ 0.22
PPFIA3-206ENST00000602655 NPEPPSP55786 919 aa16.42■□□□□ 0.22
PPFIA3-206ENST00000602655 CEP55Q53EZ4 464 aa16.42■□□□□ 0.22
PPFIA3-206ENST00000602655 SH3RF1Q7Z6J0 888 aa16.42■□□□□ 0.22
PPFIA3-206ENST00000602655 SCYL3Q8IZE3 742 aa16.42■□□□□ 0.22
PPFIA3-206ENST00000602655 ZFAND2BQ8WV99 257 aa16.42■□□□□ 0.22
PPFIA3-206ENST00000602655 PPP1R16BQ96T49 567 aa16.42■□□□□ 0.22
PPFIA3-206ENST00000602655 LRRC53A6NM62 1247 aa16.42■□□□□ 0.22
PPFIA3-206ENST00000602655 TBCAO75347 108 aaKnown RBP16.42■□□□□ 0.22
PPFIA3-206ENST00000602655 ATP6V1C1P21283 382 aa16.42■□□□□ 0.22
PPFIA3-206ENST00000602655 ZNF131P52739 623 aa16.42■□□□□ 0.22
PPFIA3-206ENST00000602655 PLA2G4FQ68DD2 849 aa16.42■□□□□ 0.22
PPFIA3-206ENST00000602655 KIAA0895Q8NCT3 520 aa16.42■□□□□ 0.22
PPFIA3-206ENST00000602655 FAM163BP0C2L3 166 aa16.42■□□□□ 0.22
PPFIA3-206ENST00000602655 CALB2P22676 271 aa16.42■□□□□ 0.22
PPFIA3-206ENST00000602655 NMT1P30419 496 aaKnown RBP16.42■□□□□ 0.22
PPFIA3-206ENST00000602655 CACNA2D1P54289 1103 aa16.42■□□□□ 0.22
PPFIA3-206ENST00000602655 PLTPP55058 493 aa16.42■□□□□ 0.22
PPFIA3-206ENST00000602655 FSTL1Q12841 308 aa16.42■□□□□ 0.22
PPFIA3-206ENST00000602655 PDIA5Q14554 519 aa16.42■□□□□ 0.22
PPFIA3-206ENST00000602655 SUPT20HL1Q3ZLR7 823 aa16.42■□□□□ 0.22
PPFIA3-206ENST00000602655 FAM26FQ5R3K3 315 aa16.42■□□□□ 0.22
PPFIA3-206ENST00000602655 SFR1Q86XK3 245 aa16.42■□□□□ 0.22
PPFIA3-206ENST00000602655 RBM12BQ8IXT5 1001 aaKnown RBP16.42■□□□□ 0.22
PPFIA3-206ENST00000602655 GPC2Q8N158 579 aa16.42■□□□□ 0.22
PPFIA3-206ENST00000602655 TMEM237Q96Q45 408 aa16.42■□□□□ 0.22
PPFIA3-206ENST00000602655 KCNH7Q9NS40 1196 aa16.42■□□□□ 0.22
PPFIA3-206ENST00000602655 ATRNL1Q5VV63 1379 aa16.41■□□□□ 0.22
PPFIA3-206ENST00000602655 ITGB5P18084 799 aa16.41■□□□□ 0.22
PPFIA3-206ENST00000602655 CASP5P51878 434 aa16.41■□□□□ 0.22
PPFIA3-206ENST00000602655 MIER3Q7Z3K6 550 aa16.41■□□□□ 0.22
PPFIA3-206ENST00000602655 GBP7Q8N8V2 638 aaPredicted RBP16.41■□□□□ 0.22
PPFIA3-206ENST00000602655 ERMNQ8TAM6 284 aa16.41■□□□□ 0.22
PPFIA3-206ENST00000602655 PCIF1Q9H4Z3 704 aa16.41■□□□□ 0.22
PPFIA3-206ENST00000602655 KBTBD4Q9NVX7 518 aa16.41■□□□□ 0.22
PPFIA3-206ENST00000602655 DBR1Q9UK59 544 aaKnown RBP16.41■□□□□ 0.22
PPFIA3-206ENST00000602655 TTI1O43156 1089 aa16.41■□□□□ 0.22
PPFIA3-206ENST00000602655 RPS12P25398 132 aaKnown RBP16.41■□□□□ 0.22
PPFIA3-206ENST00000602655 MYBPC3Q14896 1274 aa16.41■□□□□ 0.22
PPFIA3-206ENST00000602655 OLFML2BQ68BL8 750 aa16.41■□□□□ 0.22
PPFIA3-206ENST00000602655 FMO2Q99518 471 aa16.41■□□□□ 0.22
PPFIA3-206ENST00000602655 RUSC1Q9BVN2 902 aa16.41■□□□□ 0.22
PPFIA3-206ENST00000602655 THAP9Q9H5L6 903 aa16.41■□□□□ 0.22
PPFIA3-206ENST00000602655 GPRC5CQ9NQ84 441 aa16.41■□□□□ 0.22
PPFIA3-206ENST00000602655 KLRC4O43908 158 aa16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 CYP2C8P10632 490 aa16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 PTDSS1P48651 473 aaKnown RBP16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 NOVP48745 357 aa16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 TMED1Q13445 227 aa16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 SETDB1Q15047 1291 aa16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 ZRSR2Q15696 482 aaKnown RBP16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 Q4G0T1 1027 aa16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 USP38Q8NB14 1042 aa16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 KLRG1Q96E93 195 aa16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 FAM84AQ96KN4 292 aa16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 ZNF317Q96PQ6 595 aaPredicted RBP16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 RNPEPL1Q9HAU8 725 aa16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 RABGAP1Q9Y3P9 1069 aa16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 BZW2Q9Y6E2 419 aaKnown RBP16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 PLIN4Q96Q06 1357 aa16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 CCDC169A6NNP5 214 aa16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 H0YGN5 161 aa16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 LAD1O00515 517 aa16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 NVLO15381 856 aaKnown RBP16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 SNX3O60493 162 aa16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 FAM13AO94988 1023 aa16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 SKIP12755 728 aa16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 SMARCA1P28370 1054 aa16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 ZNF280AP59817 542 aaPredicted RBP16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 COASYQ13057 564 aa16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 MTMR1Q13613 665 aa16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 APBB1IPQ7Z5R6 666 aaPredicted RBP16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 C1orf131Q8NDD1 294 aaKnown RBP16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 DTX3LQ8TDB6 740 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms