RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 CABYRO75952 493 aa14.86□□□□□ -0.03
IRF3-229ENST00000601373 EDN1P05305 212 aa14.86□□□□□ -0.03
IRF3-229ENST00000601373 UCHL3P15374 230 aa14.86□□□□□ -0.03
IRF3-229ENST00000601373 GCLMP48507 274 aa14.86□□□□□ -0.03
IRF3-229ENST00000601373 ACOT2P49753 483 aa14.86□□□□□ -0.03
IRF3-229ENST00000601373 AP3M2P53677 418 aa14.86□□□□□ -0.03
IRF3-229ENST00000601373 CLDN10P78369 228 aa14.86□□□□□ -0.03
IRF3-229ENST00000601373 PPP3CAQ08209 521 aa14.86□□□□□ -0.03
IRF3-229ENST00000601373 SFMBT2Q5VUG0 894 aa14.86□□□□□ -0.03
IRF3-229ENST00000601373 DPY19L2P1Q6NXN4 242 aa14.86□□□□□ -0.03
IRF3-229ENST00000601373 TRIM65Q6PJ69 517 aa14.86□□□□□ -0.03
IRF3-229ENST00000601373 RNF180Q86T96 592 aa14.86□□□□□ -0.03
IRF3-229ENST00000601373 SESTD1Q86VW0 696 aa14.86□□□□□ -0.03
IRF3-229ENST00000601373 CCDC170Q8IYT3 715 aa14.86□□□□□ -0.03
IRF3-229ENST00000601373 CCAR2Q8N163 923 aaKnown RBP14.86□□□□□ -0.03
IRF3-229ENST00000601373 PLEKHO2Q8TD55 490 aa14.86□□□□□ -0.03
IRF3-229ENST00000601373 HAPLN2Q9GZV7 340 aa14.86□□□□□ -0.03
IRF3-229ENST00000601373 TMEM117Q9H0C3 514 aa14.86□□□□□ -0.03
IRF3-229ENST00000601373 INTS2Q9H0H0 1204 aaKnown RBP14.86□□□□□ -0.03
IRF3-229ENST00000601373 FAM49AQ9H0Q0 323 aaPredicted RBP14.86□□□□□ -0.03
IRF3-229ENST00000601373 ADAMTS10Q9H324 1103 aa14.86□□□□□ -0.03
IRF3-229ENST00000601373 MINDY3Q9H8M7 445 aa14.86□□□□□ -0.03
IRF3-229ENST00000601373 RRAGDQ9NQL2 400 aaPredicted RBP14.86□□□□□ -0.03
IRF3-229ENST00000601373 RBAKQ9NYW8 714 aaPredicted RBP14.86□□□□□ -0.03
IRF3-229ENST00000601373 COQ4Q9Y3A0 265 aa14.86□□□□□ -0.03
IRF3-229ENST00000601373 CNTNAP2Q9UHC6 1331 aa14.86□□□□□ -0.03
IRF3-229ENST00000601373 GOLGA6L9A6NEM1 432 aa14.85□□□□□ -0.03
IRF3-229ENST00000601373 ABLIM1O14639 778 aa14.85□□□□□ -0.03
IRF3-229ENST00000601373 ERLIN2O94905 339 aa14.85□□□□□ -0.03
IRF3-229ENST00000601373 MCF2P10911 925 aa14.85□□□□□ -0.03
IRF3-229ENST00000601373 CYLC1P35663 651 aaPredicted RBP14.85□□□□□ -0.03
IRF3-229ENST00000601373 AMHR2Q16671 573 aa14.85□□□□□ -0.03
IRF3-229ENST00000601373 ZNF568Q3ZCX4 644 aa14.85□□□□□ -0.03
IRF3-229ENST00000601373 EPC2Q52LR7 807 aa14.85□□□□□ -0.03
IRF3-229ENST00000601373 E4F1Q66K89 784 aaPredicted RBP14.85□□□□□ -0.03
IRF3-229ENST00000601373 WDR59Q6PJI9 974 aa14.85□□□□□ -0.03
IRF3-229ENST00000601373 CXCL17Q6UXB2 119 aa14.85□□□□□ -0.03
IRF3-229ENST00000601373 CRELD2Q6UXH1 353 aaPredicted RBP14.85□□□□□ -0.03
IRF3-229ENST00000601373 CHRDL2Q6WN34 429 aa14.85□□□□□ -0.03
IRF3-229ENST00000601373 ZBTB33Q86T24 672 aa14.85□□□□□ -0.03
IRF3-229ENST00000601373 RSPH3Q86UC2 560 aa14.85□□□□□ -0.03
IRF3-229ENST00000601373 BRSK2Q8IWQ3 736 aa14.85□□□□□ -0.03
IRF3-229ENST00000601373 DPF3Q92784 378 aa14.85□□□□□ -0.03
IRF3-229ENST00000601373 ZNF668Q96K58 619 aaPredicted RBP14.85□□□□□ -0.03
IRF3-229ENST00000601373 FAM81BQ96LP2 452 aa14.85□□□□□ -0.03
IRF3-229ENST00000601373 SPAG5Q96R06 1193 aa14.85□□□□□ -0.03
IRF3-229ENST00000601373 HMX1Q9NP08 348 aaPredicted RBP14.85□□□□□ -0.03
IRF3-229ENST00000601373 SIX2Q9NPC8 291 aa14.85□□□□□ -0.03
IRF3-229ENST00000601373 NLRC4Q9NPP4 1024 aa14.85□□□□□ -0.03
IRF3-229ENST00000601373 AIPL1Q9NZN9 384 aa14.85□□□□□ -0.03
IRF3-229ENST00000601373 GTF2IRD1Q9UHL9 959 aa14.85□□□□□ -0.03
IRF3-229ENST00000601373 NR2E3Q9Y5X4 410 aa14.85□□□□□ -0.03
IRF3-229ENST00000601373 SCN10AQ9Y5Y9 1956 aa14.84□□□□□ -0.03
IRF3-229ENST00000601373 A0A1W2PPC1 479 aa14.84□□□□□ -0.03
IRF3-229ENST00000601373 SOWAHDA6NJG2 315 aa14.84□□□□□ -0.03
IRF3-229ENST00000601373 LRRC53A6NM62 1247 aa14.84□□□□□ -0.03
IRF3-229ENST00000601373 TTLL13PA6NNM8 815 aa14.84□□□□□ -0.03
IRF3-229ENST00000601373 TREHO43280 583 aa14.84□□□□□ -0.03
IRF3-229ENST00000601373 GPR32O75388 356 aa14.84□□□□□ -0.03
IRF3-229ENST00000601373 TUBB4AP04350 444 aa14.84□□□□□ -0.03
IRF3-229ENST00000601373 INHAP05111 366 aa14.84□□□□□ -0.03
IRF3-229ENST00000601373 ASGR1P07306 291 aa14.84□□□□□ -0.03
IRF3-229ENST00000601373 CCDC175P0C221 793 aa14.84□□□□□ -0.03
IRF3-229ENST00000601373 ACTN1P12814 892 aa14.84□□□□□ -0.03
IRF3-229ENST00000601373 TNNI1P19237 187 aa14.84□□□□□ -0.03
IRF3-229ENST00000601373 GRK4P32298 578 aa14.84□□□□□ -0.03
IRF3-229ENST00000601373 PTPN11Q06124 597 aaPredicted RBP14.84□□□□□ -0.03
IRF3-229ENST00000601373 KCNA10Q16322 511 aa14.84□□□□□ -0.03
IRF3-229ENST00000601373 NBPF20Q3BBV1 942 aa14.84□□□□□ -0.03
IRF3-229ENST00000601373 CCSAPQ6IQ19 270 aaPredicted RBP14.84□□□□□ -0.03
IRF3-229ENST00000601373 RAD9BQ6WBX8 426 aa14.84□□□□□ -0.03
IRF3-229ENST00000601373 RUFY4Q6ZNE9 571 aa14.84□□□□□ -0.03
IRF3-229ENST00000601373 SH3TC2Q8TF17 1288 aa14.84□□□□□ -0.03
IRF3-229ENST00000601373 DNAJB3Q8WWF6 145 aa14.84□□□□□ -0.03
IRF3-229ENST00000601373 CHP1Q99653 195 aa14.84□□□□□ -0.03
IRF3-229ENST00000601373 ADPGKQ9BRR6 497 aa14.84□□□□□ -0.03
IRF3-229ENST00000601373 TSEN34Q9BSV6 310 aaKnown RBP14.84□□□□□ -0.03
IRF3-229ENST00000601373 STK33Q9BYT3 514 aa14.84□□□□□ -0.03
IRF3-229ENST00000601373 APEX2Q9UBZ4 518 aa14.84□□□□□ -0.03
IRF3-229ENST00000601373 CPSF3Q9UKF6 684 aaKnown RBP14.84□□□□□ -0.03
IRF3-229ENST00000601373 BZW2Q9Y6E2 419 aaKnown RBP14.84□□□□□ -0.03
IRF3-229ENST00000601373 EPN1Q9Y6I3 576 aaPredicted RBP14.84□□□□□ -0.03
IRF3-229ENST00000601373 SZT2Q5T011 3432 aa14.83□□□□□ -0.04
IRF3-229ENST00000601373 A0A1B0GUA9 196 aa14.83□□□□□ -0.04
IRF3-229ENST00000601373 SSU72P8A0A1W2PR75 194 aa14.83□□□□□ -0.04
IRF3-229ENST00000601373 B4GALT5O43286 388 aa14.83□□□□□ -0.04
IRF3-229ENST00000601373 FAM189A1O60320 539 aa14.83□□□□□ -0.04
IRF3-229ENST00000601373 ZC3H11AO75152 810 aaKnown RBP eCLIP14.83□□□□□ -0.041e-11■□□□□ 11.2
IRF3-229ENST00000601373 IPO7O95373 1038 aaKnown RBP14.83□□□□□ -0.04
IRF3-229ENST00000601373 SERPING1P05155 500 aa14.83□□□□□ -0.04
IRF3-229ENST00000601373 IQCF3P0C7M6 154 aa14.83□□□□□ -0.04
IRF3-229ENST00000601373 CCDC172P0C7W6 258 aa14.83□□□□□ -0.04
IRF3-229ENST00000601373 DLATP10515 647 aaKnown RBP14.83□□□□□ -0.04
IRF3-229ENST00000601373 HARSP12081 509 aaKnown RBP14.83□□□□□ -0.04
IRF3-229ENST00000601373 DARSP14868 501 aaKnown RBP14.83□□□□□ -0.04
IRF3-229ENST00000601373 AXLP30530 894 aa14.83□□□□□ -0.04
IRF3-229ENST00000601373 GJA8P48165 433 aa14.83□□□□□ -0.04
IRF3-229ENST00000601373 CRYBB1P53674 252 aaPredicted RBP14.83□□□□□ -0.04
IRF3-229ENST00000601373 HIC1Q14526 733 aa14.83□□□□□ -0.04
IRF3-229ENST00000601373 ASIC2Q16515 512 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms