RNA–Protein interactions for RNA: ENST00000601154.1

CCDC9-206, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 454 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-206ENST00000601154 PRKD2Q9BZL6 878 aa9.23□□□□□ -0.93
CCDC9-206ENST00000601154 FOXQ1Q9C009 403 aa9.23□□□□□ -0.93
CCDC9-206ENST00000601154 PLEKHA4Q9H4M7 779 aa9.23□□□□□ -0.93
CCDC9-206ENST00000601154 TTC12Q9H892 705 aaPredicted RBP9.23□□□□□ -0.93
CCDC9-206ENST00000601154 BRMS1Q9HCU9 246 aa9.23□□□□□ -0.93
CCDC9-206ENST00000601154 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.23□□□□□ -0.93
CCDC9-206ENST00000601154 ANKEF1Q9NU02 776 aa9.23□□□□□ -0.93
CCDC9-206ENST00000601154 ZDHHC7Q9NXF8 308 aa9.23□□□□□ -0.93
CCDC9-206ENST00000601154 USP20Q9Y2K6 914 aa9.23□□□□□ -0.93
CCDC9-206ENST00000601154 PTPRZ1P23471 2315 aaPredicted RBP9.23□□□□□ -0.93
CCDC9-206ENST00000601154 MYO10Q9HD67 2058 aa9.23□□□□□ -0.93
CCDC9-206ENST00000601154 SF3B1O75533 1304 aaKnown RBP eCLIP9.23□□□□□ -0.93
CCDC9-206ENST00000601154 C2orf16Q68DN1 1984 aa9.23□□□□□ -0.93
CCDC9-206ENST00000601154 TTLL13PA6NNM8 815 aa9.22□□□□□ -0.93
CCDC9-206ENST00000601154 CCL16O15467 120 aa9.22□□□□□ -0.93
CCDC9-206ENST00000601154 LYPLA2O95372 231 aa9.22□□□□□ -0.93
CCDC9-206ENST00000601154 LARGE1O95461 756 aa9.22□□□□□ -0.93
CCDC9-206ENST00000601154 C8AP07357 584 aa9.22□□□□□ -0.93
CCDC9-206ENST00000601154 FDPSP14324 419 aaKnown RBP9.22□□□□□ -0.93
CCDC9-206ENST00000601154 ATP2B1P20020 1258 aa9.22□□□□□ -0.93
CCDC9-206ENST00000601154 FSHRP23945 695 aa9.22□□□□□ -0.93
CCDC9-206ENST00000601154 FOXK2Q01167 660 aa9.22□□□□□ -0.93
CCDC9-206ENST00000601154 POU5F1BQ06416 359 aa9.22□□□□□ -0.93
CCDC9-206ENST00000601154 PSMD5Q16401 504 aa9.22□□□□□ -0.93
CCDC9-206ENST00000601154 PPM1LQ5SGD2 360 aa9.22□□□□□ -0.93
CCDC9-206ENST00000601154 LIN9Q5TKA1 542 aa9.22□□□□□ -0.93
CCDC9-206ENST00000601154 LILRA6Q6PI73 481 aa9.22□□□□□ -0.93
CCDC9-206ENST00000601154 DCLRE1AQ6PJP8 1040 aa9.22□□□□□ -0.93
CCDC9-206ENST00000601154 PARM1Q6UWI2 310 aa9.22□□□□□ -0.93
CCDC9-206ENST00000601154 ZBTB8OSQ8IWT0 167 aa9.22□□□□□ -0.93
CCDC9-206ENST00000601154 HDAC7Q8WUI4 952 aa9.22□□□□□ -0.93
CCDC9-206ENST00000601154 WASF1Q92558 559 aa9.22□□□□□ -0.93
CCDC9-206ENST00000601154 FGF14Q92915 247 aa9.22□□□□□ -0.93
CCDC9-206ENST00000601154 TNFRSF25Q93038 417 aa9.22□□□□□ -0.93
CCDC9-206ENST00000601154 RPP25Q9BUL9 199 aaKnown RBP9.22□□□□□ -0.93
CCDC9-206ENST00000601154 RHOBTB2Q9BYZ6 727 aa9.22□□□□□ -0.93
CCDC9-206ENST00000601154 CXCL16Q9H2A7 254 aa9.22□□□□□ -0.93
CCDC9-206ENST00000601154 SNTG2Q9NY99 539 aa9.22□□□□□ -0.93
CCDC9-206ENST00000601154 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.22□□□□□ -0.93
CCDC9-206ENST00000601154 FNIP2Q9P278 1114 aa9.22□□□□□ -0.93
CCDC9-206ENST00000601154 RIF1Q5UIP0 2472 aaKnown RBP9.21□□□□□ -0.93
CCDC9-206ENST00000601154 A0A1B0GUA9 196 aa9.21□□□□□ -0.94
CCDC9-206ENST00000601154 BTBD18B2RXH4 712 aa9.21□□□□□ -0.94
CCDC9-206ENST00000601154 ANHXE9PGG2 379 aa9.21□□□□□ -0.94
CCDC9-206ENST00000601154 PTGESO14684 152 aa9.21□□□□□ -0.94
CCDC9-206ENST00000601154 ADAM12O43184 909 aa9.21□□□□□ -0.94
CCDC9-206ENST00000601154 EPB41L2O43491 1005 aaKnown RBP9.21□□□□□ -0.94
CCDC9-206ENST00000601154 JAK2O60674 1132 aa9.21□□□□□ -0.94
CCDC9-206ENST00000601154 RECQL4O94761 1208 aa9.21□□□□□ -0.94
CCDC9-206ENST00000601154 LMNAP02545 664 aaKnown RBP9.21□□□□□ -0.94
CCDC9-206ENST00000601154 GPC5P78333 572 aa9.21□□□□□ -0.94
CCDC9-206ENST00000601154 CREMQ03060 361 aa9.21□□□□□ -0.94
CCDC9-206ENST00000601154 TUSC3Q13454 348 aa9.21□□□□□ -0.94
CCDC9-206ENST00000601154 SNW1Q13573 536 aaKnown RBP9.21□□□□□ -0.94
CCDC9-206ENST00000601154 GLRA4Q5JXX5 417 aa9.21□□□□□ -0.94
CCDC9-206ENST00000601154 NOSTRINQ8IVI9 506 aa9.21□□□□□ -0.94
CCDC9-206ENST00000601154 DIS3L2Q8IYB7 885 aaKnown RBP9.21□□□□□ -0.94
CCDC9-206ENST00000601154 KIAA2013Q8IYS2 634 aa9.21□□□□□ -0.94
CCDC9-206ENST00000601154 SLC7A14Q8TBB6 771 aa9.21□□□□□ -0.94
CCDC9-206ENST00000601154 NXPE3Q969Y0 559 aa9.21□□□□□ -0.94
CCDC9-206ENST00000601154 CLSTN3Q9BQT9 956 aa9.21□□□□□ -0.94
CCDC9-206ENST00000601154 TTPALQ9BTX7 342 aa9.21□□□□□ -0.94
CCDC9-206ENST00000601154 NFKBIZQ9BYH8 718 aa9.21□□□□□ -0.94
CCDC9-206ENST00000601154 PDZD7Q9H5P4 517 aa9.21□□□□□ -0.94
CCDC9-206ENST00000601154 PRMT7Q9NVM4 692 aaPredicted RBP9.21□□□□□ -0.94
CCDC9-206ENST00000601154 FBXW11Q9UKB1 542 aa9.21□□□□□ -0.94
CCDC9-206ENST00000601154 CDH7Q9ULB5 785 aa9.21□□□□□ -0.94
CCDC9-206ENST00000601154 GDAQ9Y2T3 454 aa9.21□□□□□ -0.94
CCDC9-206ENST00000601154 SIT1Q9Y3P8 196 aa9.21□□□□□ -0.94
CCDC9-206ENST00000601154 GVINP1Q7Z2Y8 2422 aa9.21□□□□□ -0.94
CCDC9-206ENST00000601154 ARID2Q68CP9 1835 aa9.2□□□□□ -0.94
CCDC9-206ENST00000601154 N4BP3O15049 544 aa9.2□□□□□ -0.94
CCDC9-206ENST00000601154 MED24O75448 989 aa9.2□□□□□ -0.94
CCDC9-206ENST00000601154 EDN1P05305 212 aa9.2□□□□□ -0.94
CCDC9-206ENST00000601154 PRKCBP05771 671 aa9.2□□□□□ -0.94
CCDC9-206ENST00000601154 SP9P0CG40 484 aa9.2□□□□□ -0.94
CCDC9-206ENST00000601154 GLULP15104 373 aa9.2□□□□□ -0.94
CCDC9-206ENST00000601154 MCM7P33993 719 aa9.2□□□□□ -0.94
CCDC9-206ENST00000601154 GUCY1B3Q02153 619 aa9.2□□□□□ -0.94
CCDC9-206ENST00000601154 PRPF4BQ13523 1007 aaKnown RBP9.2□□□□□ -0.94
CCDC9-206ENST00000601154 TRIM29Q14134 588 aa9.2□□□□□ -0.94
CCDC9-206ENST00000601154 EEF1DP3Q658K8 133 aa9.2□□□□□ -0.94
CCDC9-206ENST00000601154 PHLDB3Q6NSJ2 640 aa9.2□□□□□ -0.94
CCDC9-206ENST00000601154 PPP4R3CPQ6ZMV5 832 aa9.2□□□□□ -0.94
CCDC9-206ENST00000601154 PJA1Q8NG27 643 aa9.2□□□□□ -0.94
CCDC9-206ENST00000601154 ITFG1Q8TB96 612 aa9.2□□□□□ -0.94
CCDC9-206ENST00000601154 LNX1Q8TBB1 728 aaPredicted RBP9.2□□□□□ -0.94
CCDC9-206ENST00000601154 ING5Q8WYH8 240 aa9.2□□□□□ -0.94
CCDC9-206ENST00000601154 PIK3R5Q8WYR1 880 aa9.2□□□□□ -0.94
CCDC9-206ENST00000601154 BSNDQ8WZ55 320 aa9.2□□□□□ -0.94
CCDC9-206ENST00000601154 FGF13Q92913 245 aa9.2□□□□□ -0.94
CCDC9-206ENST00000601154 RMDN1Q96DB5 314 aa9.2□□□□□ -0.94
CCDC9-206ENST00000601154 MTMR9Q96QG7 549 aa9.2□□□□□ -0.94
CCDC9-206ENST00000601154 KXD1Q9BQD3 176 aa9.2□□□□□ -0.94
CCDC9-206ENST00000601154 KIFC3Q9BVG8 833 aa9.2□□□□□ -0.94
CCDC9-206ENST00000601154 TMEM60Q9H2L4 133 aa9.2□□□□□ -0.94
CCDC9-206ENST00000601154 POLD4Q9HCU8 107 aa9.2□□□□□ -0.94
CCDC9-206ENST00000601154 SLC2A4RGQ9NR83 387 aa9.2□□□□□ -0.94
CCDC9-206ENST00000601154 HCFC1R1Q9NWW0 138 aa9.2□□□□□ -0.94
CCDC9-206ENST00000601154 DLGAP2Q9P1A6 1054 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms