RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 DNM2P50570 870 aa13.94□□□□□ -0.18
UPF1-208ENST00000600012 ITIH3Q06033 890 aa13.94□□□□□ -0.18
UPF1-208ENST00000600012 MTERF2Q49AM1 385 aa13.94□□□□□ -0.18
UPF1-208ENST00000600012 ARSHQ5FYA8 562 aa13.94□□□□□ -0.18
UPF1-208ENST00000600012 PLA2G4FQ68DD2 849 aa13.94□□□□□ -0.18
UPF1-208ENST00000600012 CES5AQ6NT32 575 aa13.94□□□□□ -0.18
UPF1-208ENST00000600012 ZBTB33Q86T24 672 aa13.94□□□□□ -0.18
UPF1-208ENST00000600012 TRIML1Q8N9V2 468 aa13.94□□□□□ -0.18
UPF1-208ENST00000600012 RNF214Q8ND24 703 aa13.94□□□□□ -0.18
UPF1-208ENST00000600012 DNAJC19Q96DA6 116 aa13.94□□□□□ -0.18
UPF1-208ENST00000600012 TMEM169Q96HH4 297 aa13.94□□□□□ -0.18
UPF1-208ENST00000600012 NECTIN4Q96NY8 510 aa13.94□□□□□ -0.18
UPF1-208ENST00000600012 GSDMAQ96QA5 445 aa13.94□□□□□ -0.18
UPF1-208ENST00000600012 SH2D3AQ9BRG2 576 aa13.94□□□□□ -0.18
UPF1-208ENST00000600012 TRAIPQ9BWF2 469 aa13.94□□□□□ -0.18
UPF1-208ENST00000600012 LRRC27Q9C0I9 530 aa13.94□□□□□ -0.18
UPF1-208ENST00000600012 IGKV6-21A0A0C4DH24 114 aa13.93□□□□□ -0.18
UPF1-208ENST00000600012 DKC1O60832 514 aaKnown RBP eCLIP13.93□□□□□ -0.18
UPF1-208ENST00000600012 CLASP2O75122 1294 aaKnown RBP13.93□□□□□ -0.18
UPF1-208ENST00000600012 STBD1O95210 358 aa13.93□□□□□ -0.18
UPF1-208ENST00000600012 SKIP12755 728 aa13.93□□□□□ -0.18
UPF1-208ENST00000600012 IDEP14735 1019 aa13.93□□□□□ -0.18
UPF1-208ENST00000600012 PHKA2P46019 1235 aa13.93□□□□□ -0.18
UPF1-208ENST00000600012 RARRES1P49788 294 aa13.93□□□□□ -0.18
UPF1-208ENST00000600012 BCAR1P56945 870 aa13.93□□□□□ -0.18
UPF1-208ENST00000600012 DRP2Q13474 957 aa13.93□□□□□ -0.18
UPF1-208ENST00000600012 KCNB1Q14721 858 aa13.93□□□□□ -0.18
UPF1-208ENST00000600012 TWF2Q6IBS0 349 aaKnown RBP13.93□□□□□ -0.18
UPF1-208ENST00000600012 RINT1Q6NUQ1 792 aa13.93□□□□□ -0.18
UPF1-208ENST00000600012 CNNM4Q6P4Q7 775 aa13.93□□□□□ -0.18
UPF1-208ENST00000600012 UNC13DQ70J99 1090 aa13.93□□□□□ -0.18
UPF1-208ENST00000600012 ZNF410Q86VK4 478 aa13.93□□□□□ -0.18
UPF1-208ENST00000600012 SMYD4Q8IYR2 804 aaPredicted RBP13.93□□□□□ -0.18
UPF1-208ENST00000600012 CCDC43Q96MW1 224 aaKnown RBP13.93□□□□□ -0.18
UPF1-208ENST00000600012 CEP89Q96ST8 783 aa13.93□□□□□ -0.18
UPF1-208ENST00000600012 INO80BQ9C086 356 aaPredicted RBP13.93□□□□□ -0.18
UPF1-208ENST00000600012 ADAM7Q9H2U9 754 aa13.93□□□□□ -0.18
UPF1-208ENST00000600012 EXOC1Q9NV70 894 aa13.93□□□□□ -0.18
UPF1-208ENST00000600012 RMND1Q9NWS8 449 aa13.93□□□□□ -0.18
UPF1-208ENST00000600012 DBR1Q9UK59 544 aaKnown RBP13.93□□□□□ -0.18
UPF1-208ENST00000600012 GDAQ9Y2T3 454 aa13.93□□□□□ -0.18
UPF1-208ENST00000600012 A0A087WZ62 844 aa13.92□□□□□ -0.18
UPF1-208ENST00000600012 GOLGA6L3A6NEY3 463 aa13.92□□□□□ -0.18
UPF1-208ENST00000600012 NT5C1B-RDH14C9J2C7 533 aa13.92□□□□□ -0.18
UPF1-208ENST00000600012 USO1O60763 962 aaKnown RBP13.92□□□□□ -0.18
UPF1-208ENST00000600012 ZC3H11AO75152 810 aaKnown RBP eCLIP13.92□□□□□ -0.18
UPF1-208ENST00000600012 CSDE1O75534 798 aaKnown RBP13.92□□□□□ -0.18
UPF1-208ENST00000600012 SP100P23497 879 aaPredicted RBP13.92□□□□□ -0.18
UPF1-208ENST00000600012 CA8P35219 290 aa13.92□□□□□ -0.18
UPF1-208ENST00000600012 MTHFRP42898 656 aa13.92□□□□□ -0.18
UPF1-208ENST00000600012 RAB27AP51159 221 aa13.92□□□□□ -0.18
UPF1-208ENST00000600012 POLGP54098 1239 aaPredicted RBP13.92□□□□□ -0.18
UPF1-208ENST00000600012 NPEPPSP55786 919 aa13.92□□□□□ -0.18
UPF1-208ENST00000600012 TCF15Q12870 199 aa13.92□□□□□ -0.18
UPF1-208ENST00000600012 GIT2Q14161 759 aa13.92□□□□□ -0.18
UPF1-208ENST00000600012 XKR9Q5GH70 373 aa13.92□□□□□ -0.18
UPF1-208ENST00000600012 GLB1LQ6UWU2 654 aa13.92□□□□□ -0.18
UPF1-208ENST00000600012 ANO5Q75V66 913 aa13.92□□□□□ -0.18
UPF1-208ENST00000600012 VPS52Q8N1B4 723 aa13.92□□□□□ -0.18
UPF1-208ENST00000600012 HPS3Q969F9 1004 aa13.92□□□□□ -0.18
UPF1-208ENST00000600012 CCDC47Q96A33 483 aaKnown RBP13.92□□□□□ -0.18
UPF1-208ENST00000600012 RIPOR3Q96MK2 946 aa13.92□□□□□ -0.18
UPF1-208ENST00000600012 JPH2Q9BR39 696 aaPredicted RBP13.92□□□□□ -0.18
UPF1-208ENST00000600012 REEP2Q9BRK0 252 aa13.92□□□□□ -0.18
UPF1-208ENST00000600012 FDXACB1Q9BRP7 624 aaPredicted RBP13.92□□□□□ -0.18
UPF1-208ENST00000600012 ZBP1Q9H171 429 aa13.92□□□□□ -0.18
UPF1-208ENST00000600012 IRF2BPLQ9H1B7 796 aa13.92□□□□□ -0.18
UPF1-208ENST00000600012 POMKQ9H5K3 350 aa13.92□□□□□ -0.18
UPF1-208ENST00000600012 CBX8Q9HC52 389 aa13.92□□□□□ -0.18
UPF1-208ENST00000600012 POLD4Q9HCU8 107 aa13.92□□□□□ -0.18
UPF1-208ENST00000600012 BMP2KQ9NSY1 1161 aaPredicted RBP13.92□□□□□ -0.18
UPF1-208ENST00000600012 ANKEF1Q9NU02 776 aa13.92□□□□□ -0.18
UPF1-208ENST00000600012 DZANK1Q9NVP4 752 aa13.92□□□□□ -0.18
UPF1-208ENST00000600012 PIN4Q9Y237 131 aaKnown RBP13.92□□□□□ -0.18
UPF1-208ENST00000600012 IRAK3Q9Y616 596 aa13.92□□□□□ -0.18
UPF1-208ENST00000600012 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.91□□□□□ -0.18
UPF1-208ENST00000600012 MAFO75444 373 aaPredicted RBP13.91□□□□□ -0.18
UPF1-208ENST00000600012 RHOBTB3O94955 611 aa13.91□□□□□ -0.18
UPF1-208ENST00000600012 CXCL14O95715 111 aa13.91□□□□□ -0.18
UPF1-208ENST00000600012 AVPR2P30518 371 aa13.91□□□□□ -0.18
UPF1-208ENST00000600012 VCPP55072 806 aaKnown RBP13.91□□□□□ -0.18
UPF1-208ENST00000600012 MTMR3Q13615 1198 aa13.91□□□□□ -0.18
UPF1-208ENST00000600012 ZNF658Q5TYW1 1059 aaPredicted RBP13.91□□□□□ -0.18
UPF1-208ENST00000600012 PADI6Q6TGC4 694 aa13.91□□□□□ -0.18
UPF1-208ENST00000600012 C1orf186Q6ZWK4 172 aa13.91□□□□□ -0.18
UPF1-208ENST00000600012 RHPN2Q8IUC4 686 aa13.91□□□□□ -0.18
UPF1-208ENST00000600012 UBALD2Q8IYN6 164 aa13.91□□□□□ -0.18
UPF1-208ENST00000600012 KREMEN2Q8NCW0 462 aa13.91□□□□□ -0.18
UPF1-208ENST00000600012 FAM200AQ8TCP9 573 aa13.91□□□□□ -0.18
UPF1-208ENST00000600012 PHOX2BQ99453 314 aa13.91□□□□□ -0.18
UPF1-208ENST00000600012 ZHX3Q9H4I2 956 aa13.91□□□□□ -0.18
UPF1-208ENST00000600012 FAM105AQ9NUU6 356 aa13.91□□□□□ -0.18
UPF1-208ENST00000600012 PANK4Q9NVE7 773 aa13.91□□□□□ -0.18
UPF1-208ENST00000600012 SUCLA2Q9P2R7 463 aaPredicted RBP13.91□□□□□ -0.18
UPF1-208ENST00000600012 CDH22Q9UJ99 828 aa13.91□□□□□ -0.18
UPF1-208ENST00000600012 SORCS3Q9UPU3 1222 aa13.91□□□□□ -0.18
UPF1-208ENST00000600012 DENND4AQ7Z401 1863 aa13.91□□□□□ -0.18
UPF1-208ENST00000600012 PVALEFA0A1B0GWK0 134 aa13.9□□□□□ -0.18
UPF1-208ENST00000600012 C2CD4DB7Z1M9 353 aa13.9□□□□□ -0.18
UPF1-208ENST00000600012 ZNF623O75123 536 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms