RNA–Protein interactions for RNA: ENST00000598178.1

LTBP4-221, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-221ENST00000598178 DPP7Q9UHL4 492 aa13.8□□□□□ -0.2
LTBP4-221ENST00000598178 PHLPP2Q6ZVD8 1323 aa13.8□□□□□ -0.2
LTBP4-221ENST00000598178 TDRD15B5MCY1 1934 aaKnown RBP13.8□□□□□ -0.2
LTBP4-221ENST00000598178 MED19A0JLT2 244 aaPredicted RBP13.79□□□□□ -0.2
LTBP4-221ENST00000598178 NRP1O14786 923 aa13.79□□□□□ -0.2
LTBP4-221ENST00000598178 INPPL1O15357 1258 aa13.79□□□□□ -0.2
LTBP4-221ENST00000598178 DDHD2O94830 711 aa13.79□□□□□ -0.2
LTBP4-221ENST00000598178 NPTXRO95502 500 aa13.79□□□□□ -0.2
LTBP4-221ENST00000598178 LMNAP02545 664 aaKnown RBP13.79□□□□□ -0.2
LTBP4-221ENST00000598178 CYP11B2P19099 503 aa13.79□□□□□ -0.2
LTBP4-221ENST00000598178 PRPHP41219 470 aa13.79□□□□□ -0.2
LTBP4-221ENST00000598178 EFNA5P52803 228 aa13.79□□□□□ -0.2
LTBP4-221ENST00000598178 GRIK3Q13003 919 aa13.79□□□□□ -0.2
LTBP4-221ENST00000598178 PTGDRQ13258 359 aa13.79□□□□□ -0.2
LTBP4-221ENST00000598178 PRPF4BQ13523 1007 aaKnown RBP13.79□□□□□ -0.2
LTBP4-221ENST00000598178 FAM187BQ17R55 369 aa13.79□□□□□ -0.2
LTBP4-221ENST00000598178 DTHD1Q6ZMT9 781 aa13.79□□□□□ -0.2
LTBP4-221ENST00000598178 CABP7Q86V35 215 aa13.79□□□□□ -0.2
LTBP4-221ENST00000598178 DTWD2Q8NBA8 298 aa13.79□□□□□ -0.2
LTBP4-221ENST00000598178 GAD1Q99259 594 aa13.79□□□□□ -0.2
LTBP4-221ENST00000598178 PARP2Q9UGN5 583 aa13.79□□□□□ -0.2
LTBP4-221ENST00000598178 KIAA1024Q9UPX6 916 aa13.79□□□□□ -0.2
LTBP4-221ENST00000598178 PRG3Q9Y2Y8 225 aaPredicted RBP13.79□□□□□ -0.2
LTBP4-221ENST00000598178 HES2Q9Y543 173 aa13.79□□□□□ -0.2
LTBP4-221ENST00000598178 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.79□□□□□ -0.2
LTBP4-221ENST00000598178 A0A1B0GUA9 196 aa13.78□□□□□ -0.2
LTBP4-221ENST00000598178 B4GALT5O43286 388 aa13.78□□□□□ -0.2
LTBP4-221ENST00000598178 PI15O43692 258 aa13.78□□□□□ -0.2
LTBP4-221ENST00000598178 SOD2P04179 222 aa13.78□□□□□ -0.2
LTBP4-221ENST00000598178 PRKCBP05771 671 aa13.78□□□□□ -0.2
LTBP4-221ENST00000598178 HSP90AA1P07900 732 aaKnown RBP13.78□□□□□ -0.2
LTBP4-221ENST00000598178 KLRC2P26717 231 aa13.78□□□□□ -0.2
LTBP4-221ENST00000598178 SCNN1GP51170 649 aa13.78□□□□□ -0.2
LTBP4-221ENST00000598178 TDGQ13569 410 aa13.78□□□□□ -0.2
LTBP4-221ENST00000598178 NBR1Q14596 966 aa13.78□□□□□ -0.2
LTBP4-221ENST00000598178 PUM1Q14671 1186 aaKnown RBP eCLIP13.78□□□□□ -0.2
LTBP4-221ENST00000598178 PTPN14Q15678 1187 aa13.78□□□□□ -0.2
LTBP4-221ENST00000598178 DGLUCYQ7Z3D6 616 aa13.78□□□□□ -0.2
LTBP4-221ENST00000598178 COLGALT2Q8IYK4 626 aa13.78□□□□□ -0.2
LTBP4-221ENST00000598178 IGSF22Q8N9C0 903 aa13.78□□□□□ -0.2
LTBP4-221ENST00000598178 FLCNQ8NFG4 579 aa13.78□□□□□ -0.2
LTBP4-221ENST00000598178 AUTS2Q8WXX7 1259 aa13.78□□□□□ -0.2
LTBP4-221ENST00000598178 ACSF2Q96CM8 615 aaPredicted RBP13.78□□□□□ -0.2
LTBP4-221ENST00000598178 HERC2P3Q9BVR0 1158 aa13.78□□□□□ -0.2
LTBP4-221ENST00000598178 COLEC11Q9BWP8 271 aa13.78□□□□□ -0.2
LTBP4-221ENST00000598178 BHMT2Q9H2M3 363 aa13.78□□□□□ -0.2
LTBP4-221ENST00000598178 SFXN1Q9H9B4 322 aa13.78□□□□□ -0.2
LTBP4-221ENST00000598178 DDX19AQ9NUU7 478 aaKnown RBP13.78□□□□□ -0.2
LTBP4-221ENST00000598178 DUSP12Q9UNI6 340 aa13.78□□□□□ -0.2
LTBP4-221ENST00000598178 DNM3Q9UQ16 869 aa13.78□□□□□ -0.2
LTBP4-221ENST00000598178 SMC3Q9UQE7 1217 aa13.78□□□□□ -0.2
LTBP4-221ENST00000598178 A0A087WWV3 80 aa13.77□□□□□ -0.21
LTBP4-221ENST00000598178 SSBP05455 408 aaKnown RBP eCLIP13.77□□□□□ -0.21
LTBP4-221ENST00000598178 ADH1AP07327 375 aa13.77□□□□□ -0.21
LTBP4-221ENST00000598178 LIG1P18858 919 aa13.77□□□□□ -0.21
LTBP4-221ENST00000598178 GLUD2P49448 558 aa13.77□□□□□ -0.21
LTBP4-221ENST00000598178 CREMQ03060 361 aa13.77□□□□□ -0.21
LTBP4-221ENST00000598178 DSC1Q08554 894 aa13.77□□□□□ -0.21
LTBP4-221ENST00000598178 DCAF4L1Q3SXM0 396 aa13.77□□□□□ -0.21
LTBP4-221ENST00000598178 OTOP3Q7RTS5 596 aa13.77□□□□□ -0.21
LTBP4-221ENST00000598178 SPRYD3Q8NCJ5 442 aa13.77□□□□□ -0.21
LTBP4-221ENST00000598178 BCL7CQ8WUZ0 217 aaPredicted RBP13.77□□□□□ -0.21
LTBP4-221ENST00000598178 TMX3Q96JJ7 454 aa13.77□□□□□ -0.21
LTBP4-221ENST00000598178 DRC1Q96MC2 740 aa13.77□□□□□ -0.21
LTBP4-221ENST00000598178 ZFP42Q96MM3 310 aa13.77□□□□□ -0.21
LTBP4-221ENST00000598178 FZD8Q9H461 694 aa13.77□□□□□ -0.21
LTBP4-221ENST00000598178 DLL3Q9NYJ7 618 aa13.77□□□□□ -0.21
LTBP4-221ENST00000598178 PCDHB6Q9Y5E3 794 aa13.77□□□□□ -0.21
LTBP4-221ENST00000598178 CHD6Q8TD26 2715 aa13.77□□□□□ -0.21
LTBP4-221ENST00000598178 C2orf16Q68DN1 1984 aa13.76□□□□□ -0.21
LTBP4-221ENST00000598178 SF3B1O75533 1304 aaKnown RBP eCLIP13.76□□□□□ -0.219e-6■■■■■ 68.9
LTBP4-221ENST00000598178 ACKR2O00590 384 aa13.76□□□□□ -0.21
LTBP4-221ENST00000598178 C2CD2LO14523 706 aa13.76□□□□□ -0.21
LTBP4-221ENST00000598178 AKAP5P24588 427 aa13.76□□□□□ -0.21
LTBP4-221ENST00000598178 GJB2P29033 226 aa13.76□□□□□ -0.21
LTBP4-221ENST00000598178 AFF1P51825 1210 aaKnown RBP13.76□□□□□ -0.21
LTBP4-221ENST00000598178 DMP1Q13316 513 aaPredicted RBP13.76□□□□□ -0.21
LTBP4-221ENST00000598178 RARS2Q5T160 578 aaKnown RBP13.76□□□□□ -0.21
LTBP4-221ENST00000598178 CDR2LQ86X02 465 aaPredicted RBP13.76□□□□□ -0.21
LTBP4-221ENST00000598178 KCTD17Q8N5Z5 321 aa13.76□□□□□ -0.21
LTBP4-221ENST00000598178 C4orf32Q8N8J7 132 aa13.76□□□□□ -0.21
LTBP4-221ENST00000598178 CDK5RAP3Q96JB5 506 aa13.76□□□□□ -0.21
LTBP4-221ENST00000598178 TIPINQ9BVW5 301 aa13.76□□□□□ -0.21
LTBP4-221ENST00000598178 NT5C3AQ9H0P0 336 aa13.76□□□□□ -0.21
LTBP4-221ENST00000598178 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.76□□□□□ -0.21
LTBP4-221ENST00000598178 IGSF9Q9P2J2 1179 aa13.76□□□□□ -0.21
LTBP4-221ENST00000598178 B4GALT3O60512 393 aa13.75□□□□□ -0.21
LTBP4-221ENST00000598178 TADA2AO75478 443 aa13.75□□□□□ -0.21
LTBP4-221ENST00000598178 EPCAMP16422 314 aa13.75□□□□□ -0.21
LTBP4-221ENST00000598178 TOB1P50616 345 aaPredicted RBP13.75□□□□□ -0.21
LTBP4-221ENST00000598178 ATP2C1P98194 919 aaPredicted RBP13.75□□□□□ -0.21
LTBP4-221ENST00000598178 GPR149Q86SP6 731 aa13.75□□□□□ -0.21
LTBP4-221ENST00000598178 SLC22A17Q8WUG5 538 aa13.75□□□□□ -0.21
LTBP4-221ENST00000598178 KLHL5Q96PQ7 755 aa13.75□□□□□ -0.21
LTBP4-221ENST00000598178 RNF39Q9H2S5 420 aa13.75□□□□□ -0.21
LTBP4-221ENST00000598178 PDZD7Q9H5P4 517 aa13.75□□□□□ -0.21
LTBP4-221ENST00000598178 KCNK12Q9HB15 430 aa13.75□□□□□ -0.21
LTBP4-221ENST00000598178 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.75□□□□□ -0.21
LTBP4-221ENST00000598178 MARCH5Q9NX47 278 aa13.75□□□□□ -0.21
LTBP4-221ENST00000598178 WNT16Q9UBV4 365 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms