RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 NPTX2P47972 431 aa13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 ANO6Q4KMQ2 910 aa13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 MARCH8Q5T0T0 291 aa13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 ASTLQ6HA08 431 aaPredicted RBP13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 TAF2Q6P1X5 1199 aa13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 RSPH3Q86UC2 560 aa13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 RHPN2Q8IUC4 686 aa13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 SMYD4Q8IYR2 804 aaPredicted RBP13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 EFHBQ8N7U6 833 aa13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 ASAP3Q8TDY4 903 aa13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 SPIRE2Q8WWL2 714 aa13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 PRPF31Q8WWY3 499 aaKnown RBP13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 ZBTB10Q96DT7 871 aa13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 NLRP4Q96MN2 994 aa13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 FUCA2Q9BTY2 467 aa13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 C11orf84Q9BUA3 381 aaPredicted RBP13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 FAM49AQ9H0Q0 323 aaPredicted RBP13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 MYH11P35749 1972 aa13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 WDFY3Q8IZQ1 3526 aa13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 PHLPP2Q6ZVD8 1323 aa13.22□□□□□ -0.29
SHKBP1-213ENST00000597325 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.22□□□□□ -0.29
SHKBP1-213ENST00000597325 EIF3DO15371 548 aaKnown RBP eCLIP13.22□□□□□ -0.29
SHKBP1-213ENST00000597325 SLC16A4O15374 487 aa13.22□□□□□ -0.29
SHKBP1-213ENST00000597325 TREHO43280 583 aa13.22□□□□□ -0.29
SHKBP1-213ENST00000597325 GLRA2P23416 452 aa13.22□□□□□ -0.29
SHKBP1-213ENST00000597325 CDC42EP1Q00587 391 aa13.22□□□□□ -0.29
SHKBP1-213ENST00000597325 LAMTOR4Q0VGL1 99 aa13.22□□□□□ -0.29
SHKBP1-213ENST00000597325 STK4Q13043 487 aa13.22□□□□□ -0.29
SHKBP1-213ENST00000597325 DRP2Q13474 957 aa13.22□□□□□ -0.29
SHKBP1-213ENST00000597325 PLEKHG4Q58EX7 1191 aa13.22□□□□□ -0.29
SHKBP1-213ENST00000597325 KLHL10Q6JEL2 608 aa13.22□□□□□ -0.29
SHKBP1-213ENST00000597325 ZBTB8OSQ8IWT0 167 aa13.22□□□□□ -0.29
SHKBP1-213ENST00000597325 LINC01465Q8N7H1 131 aa13.22□□□□□ -0.29
SHKBP1-213ENST00000597325 KIAA0895Q8NCT3 520 aa13.22□□□□□ -0.29
SHKBP1-213ENST00000597325 BSNDQ8WZ55 320 aa13.22□□□□□ -0.29
SHKBP1-213ENST00000597325 CLP1Q92989 425 aaKnown RBP13.22□□□□□ -0.29
SHKBP1-213ENST00000597325 DNAJC25Q9H1X3 360 aa13.22□□□□□ -0.29
SHKBP1-213ENST00000597325 C2orf40Q9H1Z8 148 aa13.22□□□□□ -0.29
SHKBP1-213ENST00000597325 CTNND2Q9UQB3 1225 aa13.22□□□□□ -0.29
SHKBP1-213ENST00000597325 PCDHB13Q9Y5F0 798 aa13.22□□□□□ -0.29
SHKBP1-213ENST00000597325 MYO10Q9HD67 2058 aa13.21□□□□□ -0.29
SHKBP1-213ENST00000597325 M0QZ92 97 aa13.21□□□□□ -0.29
SHKBP1-213ENST00000597325 LMNAP02545 664 aaKnown RBP13.21□□□□□ -0.29
SHKBP1-213ENST00000597325 SRGAP2CP0DJJ0 459 aa13.21□□□□□ -0.29
SHKBP1-213ENST00000597325 MYBP10242 640 aa13.21□□□□□ -0.29
SHKBP1-213ENST00000597325 BMP6P22004 513 aa13.21□□□□□ -0.29
SHKBP1-213ENST00000597325 NMT1P30419 496 aaKnown RBP13.21□□□□□ -0.29
SHKBP1-213ENST00000597325 PRCPP42785 496 aa13.21□□□□□ -0.29
SHKBP1-213ENST00000597325 PHKA2P46019 1235 aa13.21□□□□□ -0.29
SHKBP1-213ENST00000597325 NCKAP1LP55160 1127 aa13.21□□□□□ -0.29
SHKBP1-213ENST00000597325 ADAM17P78536 824 aa13.21□□□□□ -0.29
SHKBP1-213ENST00000597325 ZNF200P98182 395 aaPredicted RBP13.21□□□□□ -0.29
SHKBP1-213ENST00000597325 PAK1Q13153 545 aa13.21□□□□□ -0.29
SHKBP1-213ENST00000597325 PTK7Q13308 1070 aa13.21□□□□□ -0.29
SHKBP1-213ENST00000597325 CAPSQ13938 189 aa13.21□□□□□ -0.29
SHKBP1-213ENST00000597325 COBLL1Q53SF7 1204 aa13.21□□□□□ -0.29
SHKBP1-213ENST00000597325 CT47A1Q5JQC4 288 aaPredicted RBP13.21□□□□□ -0.29
SHKBP1-213ENST00000597325 RUFY4Q6ZNE9 571 aa13.21□□□□□ -0.29
SHKBP1-213ENST00000597325 C11orf57Q6ZUT1 292 aaPredicted RBP13.21□□□□□ -0.29
SHKBP1-213ENST00000597325 HAUS6Q7Z4H7 955 aa13.21□□□□□ -0.29
SHKBP1-213ENST00000597325 ADGRD2Q7Z7M1 963 aa13.21□□□□□ -0.29
SHKBP1-213ENST00000597325 ZNF710Q8N1W2 664 aa13.21□□□□□ -0.29
SHKBP1-213ENST00000597325 GUF1Q8N442 669 aaKnown RBP13.21□□□□□ -0.29
SHKBP1-213ENST00000597325 RNF149Q8NC42 400 aa13.21□□□□□ -0.29
SHKBP1-213ENST00000597325 NLRP7Q8WX94 980 aa13.21□□□□□ -0.29
SHKBP1-213ENST00000597325 HVCN1Q96D96 273 aa13.21□□□□□ -0.29
SHKBP1-213ENST00000597325 RC3H2Q9HBD1 1191 aaKnown RBP13.21□□□□□ -0.29
SHKBP1-213ENST00000597325 BARX2Q9UMQ3 279 aaPredicted RBP13.21□□□□□ -0.29
SHKBP1-213ENST00000597325 MAPK8IP1Q9UQF2 711 aa13.21□□□□□ -0.29
SHKBP1-213ENST00000597325 KAT6AQ92794 2004 aa13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 BICDL2A1A5D9 508 aa13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 DENND3A2RUS2 1198 aa13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 UPP2O95045 317 aa13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 VTNP04004 478 aa13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 ZNF165P49910 485 aa13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 CLCN5P51795 746 aa13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 CASP5P51878 434 aa13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 EFNA5P52803 228 aa13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 STRN3Q13033 797 aa13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 HIC1Q14526 733 aa13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 ZNF720Q7Z2F6 126 aa13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 SERINC5Q86VE9 423 aa13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 ZNF410Q86VK4 478 aa13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 NELFCDQ8IXH7 590 aa13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 UBALD2Q8IYN6 164 aa13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 KIAA0319LQ8IZA0 1049 aa13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 SYCP3Q8IZU3 236 aa13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 NME8Q8N427 588 aa13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 FIBCD1Q8N539 461 aa13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 DNAJB3Q8WWF6 145 aa13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 NELFBQ8WX92 580 aa13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 DHTKD1Q96HY7 919 aaPredicted RBP13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 ACCSQ96QU6 501 aa13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 PPP1R16BQ96T49 567 aa13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 TSG101Q99816 390 aa13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 KIFC3Q9BVG8 833 aa13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 FGFBP2Q9BYJ0 223 aa13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 SEMA4AQ9H3S1 761 aa13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 ST6GALNAC4Q9H4F1 302 aa13.2□□□□□ -0.3
SHKBP1-213ENST00000597325 EXOC7Q9UPT5 735 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms