RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 HARSP12081 509 aaKnown RBP15.94■□□□□ 0.14
VRK3-206ENST00000594090 IRS1P35568 1242 aa15.94■□□□□ 0.14
VRK3-206ENST00000594090 LIG4P49917 911 aa15.94■□□□□ 0.14
VRK3-206ENST00000594090 KRT17Q04695 432 aa15.94■□□□□ 0.14
VRK3-206ENST00000594090 MCL1Q07820 350 aa15.94■□□□□ 0.14
VRK3-206ENST00000594090 COASYQ13057 564 aa15.94■□□□□ 0.14
VRK3-206ENST00000594090 ZC2HC1CQ53FD0 456 aaPredicted RBP15.94■□□□□ 0.14
VRK3-206ENST00000594090 HERC4Q5GLZ8 1057 aaPredicted RBP15.94■□□□□ 0.14
VRK3-206ENST00000594090 TCEAL5Q5H9L2 206 aa15.94■□□□□ 0.14
VRK3-206ENST00000594090 CNNM4Q6P4Q7 775 aa15.94■□□□□ 0.14
VRK3-206ENST00000594090 ZNF720Q7Z2F6 126 aa15.94■□□□□ 0.14
VRK3-206ENST00000594090 CCDC65Q8IXS2 484 aa15.94■□□□□ 0.14
VRK3-206ENST00000594090 HVCN1Q96D96 273 aa15.94■□□□□ 0.14
VRK3-206ENST00000594090 TMEM169Q96HH4 297 aa15.94■□□□□ 0.14
VRK3-206ENST00000594090 IGSF21Q96ID5 467 aa15.94■□□□□ 0.14
VRK3-206ENST00000594090 CCDC94Q9BW85 323 aaPredicted RBP15.94■□□□□ 0.14
VRK3-206ENST00000594090 HAPLN2Q9GZV7 340 aa15.94■□□□□ 0.14
VRK3-206ENST00000594090 PRDM6Q9NQX0 595 aa15.94■□□□□ 0.14
VRK3-206ENST00000594090 TBC1D7Q9P0N9 293 aa15.94■□□□□ 0.14
VRK3-206ENST00000594090 CIZ1Q9ULV3 898 aaPredicted RBP15.94■□□□□ 0.14
VRK3-206ENST00000594090 FAM237AA0A1B0GTK4 181 aa15.94■□□□□ 0.14
VRK3-206ENST00000594090 NRP1O14786 923 aa15.94■□□□□ 0.14
VRK3-206ENST00000594090 CLDN3O15551 220 aa15.94■□□□□ 0.14
VRK3-206ENST00000594090 GCNT3O95395 438 aa15.94■□□□□ 0.14
VRK3-206ENST00000594090 OSTNP61366 133 aa15.94■□□□□ 0.14
VRK3-206ENST00000594090 ASIC1P78348 528 aa15.94■□□□□ 0.14
VRK3-206ENST00000594090 CEP57L1Q8IYX8 460 aa15.94■□□□□ 0.14
VRK3-206ENST00000594090 BCL7CQ8WUZ0 217 aaPredicted RBP15.94■□□□□ 0.14
VRK3-206ENST00000594090 C7orf25Q9BPX7 421 aa15.94■□□□□ 0.14
VRK3-206ENST00000594090 STRA6Q9BX79 667 aa15.94■□□□□ 0.14
VRK3-206ENST00000594090 CXCL16Q9H2A7 254 aa15.94■□□□□ 0.14
VRK3-206ENST00000594090 SERTAD1Q9UHV2 236 aa15.94■□□□□ 0.14
VRK3-206ENST00000594090 PUF60Q9UHX1 559 aaKnown RBP15.94■□□□□ 0.14
VRK3-206ENST00000594090 FAN1Q9Y2M0 1017 aa15.94■□□□□ 0.14
VRK3-206ENST00000594090 PCDHGC5Q9Y5F6 944 aa15.94■□□□□ 0.14
VRK3-206ENST00000594090 UNC80Q8N2C7 3258 aa15.93■□□□□ 0.14
VRK3-206ENST00000594090 A0A1W2PQ27 194 aa15.93■□□□□ 0.14
VRK3-206ENST00000594090 A0A1W2PQ64 194 aa15.93■□□□□ 0.14
VRK3-206ENST00000594090 A0A1W2PQD8 194 aa15.93■□□□□ 0.14
VRK3-206ENST00000594090 FSCN2O14926 492 aa15.93■□□□□ 0.14
VRK3-206ENST00000594090 ALDH2P05091 517 aa15.93■□□□□ 0.14
VRK3-206ENST00000594090 THP07101 528 aa15.93■□□□□ 0.14
VRK3-206ENST00000594090 SLFN14P0C7P3 912 aa15.93■□□□□ 0.14
VRK3-206ENST00000594090 MATR3P43243 847 aaKnown RBP eCLIP15.93■□□□□ 0.14
VRK3-206ENST00000594090 OR1G1P47890 313 aa15.93■□□□□ 0.14
VRK3-206ENST00000594090 CASP5P51878 434 aa15.93■□□□□ 0.14
VRK3-206ENST00000594090 YARSP54577 528 aaKnown RBP15.93■□□□□ 0.14
VRK3-206ENST00000594090 ERVFC1P60507 584 aa15.93■□□□□ 0.14
VRK3-206ENST00000594090 SLC39A4Q6P5W5 647 aa15.93■□□□□ 0.14
VRK3-206ENST00000594090 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.93■□□□□ 0.14
VRK3-206ENST00000594090 FSIP1Q8NA03 581 aa15.93■□□□□ 0.14
VRK3-206ENST00000594090 ACAP3Q96P50 834 aa15.93■□□□□ 0.14
VRK3-206ENST00000594090 TCF25Q9BQ70 676 aa15.93■□□□□ 0.14
VRK3-206ENST00000594090 FGFBP2Q9BYJ0 223 aa15.93■□□□□ 0.14
VRK3-206ENST00000594090 ENTPD7Q9NQZ7 604 aa15.93■□□□□ 0.14
VRK3-206ENST00000594090 TOPORSQ9NS56 1045 aaPredicted RBP15.93■□□□□ 0.14
VRK3-206ENST00000594090 MARCH5Q9NX47 278 aa15.93■□□□□ 0.14
VRK3-206ENST00000594090 THEGQ9P2T0 379 aa15.93■□□□□ 0.14
VRK3-206ENST00000594090 PRG3Q9Y2Y8 225 aaPredicted RBP15.93■□□□□ 0.14
VRK3-206ENST00000594090 XIRP2A4UGR9 3374 aa15.92■□□□□ 0.14
VRK3-206ENST00000594090 MYBP10242 640 aa15.92■□□□□ 0.14
VRK3-206ENST00000594090 CASP1P29466 404 aa15.92■□□□□ 0.14
VRK3-206ENST00000594090 SYKP43405 635 aa15.92■□□□□ 0.14
VRK3-206ENST00000594090 AFMP43652 599 aa15.92■□□□□ 0.14
VRK3-206ENST00000594090 NDUFA8P51970 172 aa15.92■□□□□ 0.14
VRK3-206ENST00000594090 TUSC3Q13454 348 aa15.92■□□□□ 0.14
VRK3-206ENST00000594090 ALCAMQ13740 583 aa15.92■□□□□ 0.14
VRK3-206ENST00000594090 NAB2Q15742 525 aa15.92■□□□□ 0.14
VRK3-206ENST00000594090 TPRNQ4KMQ1 711 aa15.92■□□□□ 0.14
VRK3-206ENST00000594090 SEZ6Q53EL9 994 aa15.92■□□□□ 0.14
VRK3-206ENST00000594090 XKR4Q5GH76 650 aa15.92■□□□□ 0.14
VRK3-206ENST00000594090 GLRA4Q5JXX5 417 aa15.92■□□□□ 0.14
VRK3-206ENST00000594090 L1TD1Q5T7N2 865 aaKnown RBP15.92■□□□□ 0.14
VRK3-206ENST00000594090 PLPP4Q5VZY2 271 aa15.92■□□□□ 0.14
VRK3-206ENST00000594090 PDE12Q6L8Q7 609 aaKnown RBP15.92■□□□□ 0.14
VRK3-206ENST00000594090 ADGRD2Q7Z7M1 963 aa15.92■□□□□ 0.14
VRK3-206ENST00000594090 DDX53Q86TM3 631 aaKnown RBP15.92■□□□□ 0.14
VRK3-206ENST00000594090 GRAMD1CQ8IYS0 662 aa15.92■□□□□ 0.14
VRK3-206ENST00000594090 MICAL1Q8TDZ2 1067 aa15.92■□□□□ 0.14
VRK3-206ENST00000594090 SNX27Q96L92 541 aa15.92■□□□□ 0.14
VRK3-206ENST00000594090 BLZF1Q9H2G9 400 aa15.92■□□□□ 0.14
VRK3-206ENST00000594090 GOLPH3LQ9H4A5 285 aa15.92■□□□□ 0.14
VRK3-206ENST00000594090 USP25Q9UHP3 1055 aa15.92■□□□□ 0.14
VRK3-206ENST00000594090 CITO14578 2027 aa15.91■□□□□ 0.14
VRK3-206ENST00000594090 PDCD11Q14690 1871 aaKnown RBP15.91■□□□□ 0.14
VRK3-206ENST00000594090 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.91■□□□□ 0.14
VRK3-206ENST00000594090 A0A0B4J269 797 aa15.91■□□□□ 0.14
VRK3-206ENST00000594090 CASTOR2A6NHX0 329 aa15.91■□□□□ 0.14
VRK3-206ENST00000594090 KCNA1Q09470 495 aa15.91■□□□□ 0.14
VRK3-206ENST00000594090 HYAL1Q12794 435 aa15.91■□□□□ 0.14
VRK3-206ENST00000594090 CUL4BQ13620 913 aa15.91■□□□□ 0.14
VRK3-206ENST00000594090 ALKAL1Q6UXT8 129 aa15.91■□□□□ 0.14
VRK3-206ENST00000594090 UNC13DQ70J99 1090 aa15.91■□□□□ 0.14
VRK3-206ENST00000594090 VPS52Q8N1B4 723 aa15.91■□□□□ 0.14
VRK3-206ENST00000594090 HPS3Q969F9 1004 aa15.91■□□□□ 0.14
VRK3-206ENST00000594090 PPP2R3CQ969Q6 453 aa15.91■□□□□ 0.14
VRK3-206ENST00000594090 PAGE5Q96GU1 130 aa15.91■□□□□ 0.14
VRK3-206ENST00000594090 VN1R3Q9BXE9 311 aa15.91■□□□□ 0.14
VRK3-206ENST00000594090 ZBP1Q9H171 429 aa15.91■□□□□ 0.14
VRK3-206ENST00000594090 CNTN3Q9P232 1028 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms