RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 NFKBIZQ9BYH8 718 aa16.33■□□□□ 0.2
PNKP-202ENST00000593706 RHOBTB2Q9BYZ6 727 aa16.33■□□□□ 0.2
PNKP-202ENST00000593706 PLEKHA4Q9H4M7 779 aa16.33■□□□□ 0.2
PNKP-202ENST00000593706 KLK14Q9P0G3 267 aa16.33■□□□□ 0.2
PNKP-202ENST00000593706 PARP2Q9UGN5 583 aa16.33■□□□□ 0.2
PNKP-202ENST00000593706 ZMYM2Q9UBW7 1377 aa16.33■□□□□ 0.2
PNKP-202ENST00000593706 TGM5O43548 720 aa16.32■□□□□ 0.2
PNKP-202ENST00000593706 SF3B1O75533 1304 aaKnown RBP eCLIP16.32■□□□□ 0.27e-7■■■■■ 86
PNKP-202ENST00000593706 EFEMP2O95967 443 aa16.32■□□□□ 0.2
PNKP-202ENST00000593706 ARL2P36404 184 aa16.32■□□□□ 0.2
PNKP-202ENST00000593706 FOSBP53539 338 aa16.32■□□□□ 0.2
PNKP-202ENST00000593706 TRIM29Q14134 588 aa16.32■□□□□ 0.2
PNKP-202ENST00000593706 ANGPT1Q15389 498 aa16.32■□□□□ 0.2
PNKP-202ENST00000593706 TMEM132AQ24JP5 1023 aa16.32■□□□□ 0.2
PNKP-202ENST00000593706 DTWD2Q8NBA8 298 aa16.32■□□□□ 0.2
PNKP-202ENST00000593706 RABGGTAQ92696 567 aa16.32■□□□□ 0.2
PNKP-202ENST00000593706 ZNF707Q96C28 371 aaPredicted RBP16.32■□□□□ 0.2
PNKP-202ENST00000593706 MYADMQ96S97 322 aa16.32■□□□□ 0.2
PNKP-202ENST00000593706 HSD17B14Q9BPX1 270 aa16.32■□□□□ 0.2
PNKP-202ENST00000593706 GPR62Q9BZJ7 368 aa16.32■□□□□ 0.2
PNKP-202ENST00000593706 CHST7Q9NS84 486 aa16.32■□□□□ 0.2
PNKP-202ENST00000593706 ZDHHC7Q9NXF8 308 aa16.32■□□□□ 0.2
PNKP-202ENST00000593706 EPS15L1Q9UBC2 864 aa16.32■□□□□ 0.2
PNKP-202ENST00000593706 CA14Q9ULX7 337 aa16.32■□□□□ 0.2
PNKP-202ENST00000593706 NOTCH4Q99466 2003 aa16.31■□□□□ 0.2
PNKP-202ENST00000593706 POTEMA6NI47 508 aa16.31■□□□□ 0.2
PNKP-202ENST00000593706 TADA2AO75478 443 aa16.31■□□□□ 0.2
PNKP-202ENST00000593706 SRFP11831 508 aa16.31■□□□□ 0.2
PNKP-202ENST00000593706 RPL17P18621 184 aaKnown RBP16.31■□□□□ 0.2
PNKP-202ENST00000593706 HSP90AA2PQ14568 343 aaPredicted RBP16.31■□□□□ 0.2
PNKP-202ENST00000593706 MAEAQ7L5Y9 396 aa16.31■□□□□ 0.2
PNKP-202ENST00000593706 ZBTB8OSQ8IWT0 167 aa16.31■□□□□ 0.2
PNKP-202ENST00000593706 HASPINQ8TF76 798 aa16.31■□□□□ 0.2
PNKP-202ENST00000593706 LLPHQ9BRT6 129 aaKnown RBP16.31■□□□□ 0.2
PNKP-202ENST00000593706 NT5C3AQ9H0P0 336 aa16.31■□□□□ 0.2
PNKP-202ENST00000593706 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.31■□□□□ 0.21e-7■■■□□ 14.9
PNKP-202ENST00000593706 FNIP2Q9P278 1114 aa16.31■□□□□ 0.2
PNKP-202ENST00000593706 CACNG4Q9UBN1 327 aa16.31■□□□□ 0.2
PNKP-202ENST00000593706 WNT16Q9UBV4 365 aa16.31■□□□□ 0.2
PNKP-202ENST00000593706 CACNA1AO00555 2505 aa16.3■□□□□ 0.2
PNKP-202ENST00000593706 A0A1B0GUA9 196 aa16.3■□□□□ 0.2
PNKP-202ENST00000593706 WNT7AO00755 349 aa16.3■□□□□ 0.2
PNKP-202ENST00000593706 LIN9Q5TKA1 542 aa16.3■□□□□ 0.2
PNKP-202ENST00000593706 PRSS55Q6UWB4 352 aaPredicted RBP16.3■□□□□ 0.2
PNKP-202ENST00000593706 CCDC83Q8IWF9 413 aa16.3■□□□□ 0.2
PNKP-202ENST00000593706 DIS3L2Q8IYB7 885 aaKnown RBP16.3■□□□□ 0.2
PNKP-202ENST00000593706 SLC44A3Q8N4M1 653 aa16.3■□□□□ 0.2
PNKP-202ENST00000593706 GSTCDQ8NEC7 633 aa16.3■□□□□ 0.2
PNKP-202ENST00000593706 MCPH1Q8NEM0 835 aa16.3■□□□□ 0.2
PNKP-202ENST00000593706 NXPE3Q969Y0 559 aa16.3■□□□□ 0.2
PNKP-202ENST00000593706 PRIMPOLQ96LW4 560 aa16.3■□□□□ 0.2
PNKP-202ENST00000593706 PRKD2Q9BZL6 878 aa16.3■□□□□ 0.2
PNKP-202ENST00000593706 GPRC5CQ9NQ84 441 aa16.3■□□□□ 0.2
PNKP-202ENST00000593706 PRMT7Q9NVM4 692 aaPredicted RBP16.3■□□□□ 0.2
PNKP-202ENST00000593706 A0A087WWV3 80 aa16.29■□□□□ 0.2
PNKP-202ENST00000593706 KRBA1A5PL33 1030 aa16.29■□□□□ 0.2
PNKP-202ENST00000593706 CASTOR2A6NHX0 329 aa16.29■□□□□ 0.2
PNKP-202ENST00000593706 BTBD18B2RXH4 712 aa16.29■□□□□ 0.2
PNKP-202ENST00000593706 C1RP00736 705 aa16.29■□□□□ 0.2
PNKP-202ENST00000593706 ATP2B1P20020 1258 aa16.29■□□□□ 0.2
PNKP-202ENST00000593706 TUSC3Q13454 348 aa16.29■□□□□ 0.2
PNKP-202ENST00000593706 RTP2Q5QGT7 225 aa16.29■□□□□ 0.2
PNKP-202ENST00000593706 CEP57Q86XR8 500 aa16.29■□□□□ 0.2
PNKP-202ENST00000593706 GPR65Q8IYL9 337 aa16.29■□□□□ 0.2
PNKP-202ENST00000593706 ADSSL1Q8N142 457 aa16.29■□□□□ 0.2
PNKP-202ENST00000593706 GPR152Q8TDT2 470 aa16.29■□□□□ 0.2
PNKP-202ENST00000593706 PAAF1Q9BRP4 392 aa16.29■□□□□ 0.2
PNKP-202ENST00000593706 TBC1D17Q9HA65 648 aa16.29■□□□□ 0.2
PNKP-202ENST00000593706 SH2B1Q9NRF2 756 aaPredicted RBP16.29■□□□□ 0.2
PNKP-202ENST00000593706 N4BP3O15049 544 aa16.28■□□□□ 0.2
PNKP-202ENST00000593706 ZMYND10O75800 440 aa16.28■□□□□ 0.2
PNKP-202ENST00000593706 KIF4AO95239 1232 aa16.28■□□□□ 0.2
PNKP-202ENST00000593706 LAMP2P13473 410 aa16.28■□□□□ 0.2
PNKP-202ENST00000593706 LIG1P18858 919 aa16.28■□□□□ 0.2
PNKP-202ENST00000593706 FSHRP23945 695 aa16.28■□□□□ 0.2
PNKP-202ENST00000593706 RABEP1Q15276 862 aa16.28■□□□□ 0.2
PNKP-202ENST00000593706 PSMD5Q16401 504 aa16.28■□□□□ 0.2
PNKP-202ENST00000593706 SPECC1Q5M775 1068 aa16.28■□□□□ 0.2
PNKP-202ENST00000593706 FAM171A1Q5VUB5 890 aa16.28■□□□□ 0.2
PNKP-202ENST00000593706 CDCA2Q69YH5 1023 aaPredicted RBP16.28■□□□□ 0.2
PNKP-202ENST00000593706 PPP4R3CPQ6ZMV5 832 aa16.28■□□□□ 0.2
PNKP-202ENST00000593706 KCNG4Q8TDN1 519 aa16.28■□□□□ 0.2
PNKP-202ENST00000593706 ZSCAN31Q96LW9 406 aaPredicted RBP16.28■□□□□ 0.2
PNKP-202ENST00000593706 ADPGKQ9BRR6 497 aa16.28■□□□□ 0.2
PNKP-202ENST00000593706 C2orf40Q9H1Z8 148 aa16.28■□□□□ 0.2
PNKP-202ENST00000593706 ARHGEF3Q9NR81 526 aa16.28■□□□□ 0.2
PNKP-202ENST00000593706 NUMBLQ9Y6R0 609 aa16.28■□□□□ 0.2
PNKP-202ENST00000593706 OTOGLQ3ZCN5 2332 aa16.27■□□□□ 0.2
PNKP-202ENST00000593706 RECQL4O94761 1208 aa16.27■□□□□ 0.2
PNKP-202ENST00000593706 CD2BP2O95400 341 aaKnown RBP16.27■□□□□ 0.2
PNKP-202ENST00000593706 XRCC6P12956 609 aaKnown RBP eCLIP16.27■□□□□ 0.2
PNKP-202ENST00000593706 MCM7P33993 719 aa16.27■□□□□ 0.2
PNKP-202ENST00000593706 PRPF4BQ13523 1007 aaKnown RBP16.27■□□□□ 0.2
PNKP-202ENST00000593706 HTR4Q13639 388 aa16.27■□□□□ 0.2
PNKP-202ENST00000593706 PPM1LQ5SGD2 360 aa16.27■□□□□ 0.2
PNKP-202ENST00000593706 LILRA6Q6PI73 481 aa16.27■□□□□ 0.2
PNKP-202ENST00000593706 MTMR9Q96QG7 549 aa16.27■□□□□ 0.2
PNKP-202ENST00000593706 TTPALQ9BTX7 342 aa16.27■□□□□ 0.2
PNKP-202ENST00000593706 PDZD7Q9H5P4 517 aa16.27■□□□□ 0.2
PNKP-202ENST00000593706 TUFT1Q9NNX1 390 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms