RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 ZDHHC7Q9NXF8 308 aa25.06■■□□□ 1.6
SSBP4-203ENST00000593641 DMDP11532 3685 aa25.06■■□□□ 1.6
SSBP4-203ENST00000593641 VPS13AQ96RL7 3174 aa25.06■■□□□ 1.6
SSBP4-203ENST00000593641 DOCK6Q96HP0 2047 aa25.05■■□□□ 1.6
SSBP4-203ENST00000593641 AOC1P19801 751 aa25.05■■□□□ 1.6
SSBP4-203ENST00000593641 TUSC3Q13454 348 aa25.05■■□□□ 1.6
SSBP4-203ENST00000593641 FAM187BQ17R55 369 aa25.05■■□□□ 1.6
SSBP4-203ENST00000593641 RABGGTAQ92696 567 aa25.05■■□□□ 1.6
SSBP4-203ENST00000593641 FZD8Q9H461 694 aa25.05■■□□□ 1.6
SSBP4-203ENST00000593641 EPS15L1Q9UBC2 864 aa25.05■■□□□ 1.6
SSBP4-203ENST00000593641 N4BP3O15049 544 aa25.04■■□□□ 1.6
SSBP4-203ENST00000593641 MED24O75448 989 aa25.04■■□□□ 1.6
SSBP4-203ENST00000593641 RPL17P18621 184 aaKnown RBP25.04■■□□□ 1.6
SSBP4-203ENST00000593641 NBL1P41271 181 aa25.04■■□□□ 1.6
SSBP4-203ENST00000593641 MAPK6Q16659 721 aa25.04■■□□□ 1.6
SSBP4-203ENST00000593641 ZNF707Q96C28 371 aaPredicted RBP25.04■■□□□ 1.6
SSBP4-203ENST00000593641 RTP3Q9BQQ7 232 aa25.04■■□□□ 1.6
SSBP4-203ENST00000593641 ADPGKQ9BRR6 497 aa25.04■■□□□ 1.6
SSBP4-203ENST00000593641 POLR3CQ9BUI4 534 aaPredicted RBP25.04■■□□□ 1.6
SSBP4-203ENST00000593641 NT5C3AQ9H0P0 336 aa25.04■■□□□ 1.6
SSBP4-203ENST00000593641 ARHGEF35A5YM69 484 aa25.03■■□□□ 1.6
SSBP4-203ENST00000593641 NARSO43776 548 aaKnown RBP25.03■■□□□ 1.6
SSBP4-203ENST00000593641 RFX1P22670 979 aa25.03■■□□□ 1.6
SSBP4-203ENST00000593641 GUCY1B3Q02153 619 aa25.03■■□□□ 1.6
SSBP4-203ENST00000593641 PRPF4BQ13523 1007 aaKnown RBP25.03■■□□□ 1.6
SSBP4-203ENST00000593641 POTEGQ6S5H5 508 aa25.03■■□□□ 1.6
SSBP4-203ENST00000593641 NXPE3Q969Y0 559 aa25.03■■□□□ 1.6
SSBP4-203ENST00000593641 MYADMQ96S97 322 aa25.03■■□□□ 1.6
SSBP4-203ENST00000593641 PRKD2Q9BZL6 878 aa25.03■■□□□ 1.6
SSBP4-203ENST00000593641 CACNG4Q9UBN1 327 aa25.03■■□□□ 1.6
SSBP4-203ENST00000593641 TRIP11Q15643 1979 aa25.03■■□□□ 1.6
SSBP4-203ENST00000593641 CASTOR2A6NHX0 329 aa25.02■■□□□ 1.6
SSBP4-203ENST00000593641 PAPLNO95428 1278 aa25.02■■□□□ 1.6
SSBP4-203ENST00000593641 PRKCBP05771 671 aa25.02■■□□□ 1.6
SSBP4-203ENST00000593641 CFHP08603 1231 aa25.02■■□□□ 1.6
SSBP4-203ENST00000593641 OR52Z1P0C646 297 aa25.02■■□□□ 1.6
SSBP4-203ENST00000593641 NPR3P17342 541 aa25.02■■□□□ 1.6
SSBP4-203ENST00000593641 RPA1P27694 616 aa25.02■■□□□ 1.6
SSBP4-203ENST00000593641 ORC2Q13416 577 aaPredicted RBP25.02■■□□□ 1.6
SSBP4-203ENST00000593641 RTP2Q5QGT7 225 aa25.02■■□□□ 1.6
SSBP4-203ENST00000593641 PADI6Q6TGC4 694 aa25.02■■□□□ 1.6
SSBP4-203ENST00000593641 GET4Q7L5D6 327 aaPredicted RBP25.02■■□□□ 1.6
SSBP4-203ENST00000593641 DEPTORQ8TB45 409 aa25.02■■□□□ 1.6
SSBP4-203ENST00000593641 HASPINQ8TF76 798 aa25.02■■□□□ 1.6
SSBP4-203ENST00000593641 RSAD2Q8WXG1 361 aa25.02■■□□□ 1.6
SSBP4-203ENST00000593641 PAAF1Q9BRP4 392 aa25.02■■□□□ 1.6
SSBP4-203ENST00000593641 PDZD7Q9H5P4 517 aa25.02■■□□□ 1.6
SSBP4-203ENST00000593641 SNTG2Q9NY99 539 aa25.02■■□□□ 1.6
SSBP4-203ENST00000593641 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.02■■□□□ 1.6
SSBP4-203ENST00000593641 WNT16Q9UBV4 365 aa25.02■■□□□ 1.6
SSBP4-203ENST00000593641 STK25O00506 426 aa25.01■■□□□ 1.59
SSBP4-203ENST00000593641 THP07101 528 aa25.01■■□□□ 1.59
SSBP4-203ENST00000593641 LIG1P18858 919 aa25.01■■□□□ 1.59
SSBP4-203ENST00000593641 PPP2R5AQ15172 486 aa25.01■■□□□ 1.59
SSBP4-203ENST00000593641 HAUS3Q68CZ6 603 aa25.01■■□□□ 1.59
SSBP4-203ENST00000593641 LILRA6Q6PI73 481 aa25.01■■□□□ 1.59
SSBP4-203ENST00000593641 PRSS55Q6UWB4 352 aaPredicted RBP25.01■■□□□ 1.59
SSBP4-203ENST00000593641 CCDC105Q8IYK2 499 aa25.01■■□□□ 1.59
SSBP4-203ENST00000593641 C8orf76Q96K31 380 aa25.01■■□□□ 1.59
SSBP4-203ENST00000593641 TTPALQ9BTX7 342 aa25.01■■□□□ 1.59
SSBP4-203ENST00000593641 VWA8A3KMH1 1905 aa25.01■■□□□ 1.59
SSBP4-203ENST00000593641 SPTBN4Q9H254 2564 aa25.01■■□□□ 1.59
SSBP4-203ENST00000593641 PRR23AA6NEV1 266 aa25■■□□□ 1.59
SSBP4-203ENST00000593641 PI15O43692 258 aa25■■□□□ 1.59
SSBP4-203ENST00000593641 ZMYND10O75800 440 aa25■■□□□ 1.59
SSBP4-203ENST00000593641 RECQL4O94761 1208 aa25■■□□□ 1.59
SSBP4-203ENST00000593641 KIF4AO95239 1232 aa25■■□□□ 1.59
SSBP4-203ENST00000593641 CYP11B2P19099 503 aa25■■□□□ 1.59
SSBP4-203ENST00000593641 NAMPTP43490 491 aa25■■□□□ 1.59
SSBP4-203ENST00000593641 ST3GAL1Q11201 340 aa25■■□□□ 1.59
SSBP4-203ENST00000593641 LIN9Q5TKA1 542 aa25■■□□□ 1.59
SSBP4-203ENST00000593641 FAM171A1Q5VUB5 890 aa25■■□□□ 1.59
SSBP4-203ENST00000593641 ASCL5Q7RTU5 278 aa25■■□□□ 1.59
SSBP4-203ENST00000593641 CEP57Q86XR8 500 aa25■■□□□ 1.59
SSBP4-203ENST00000593641 BSNDQ8WZ55 320 aa25■■□□□ 1.59
SSBP4-203ENST00000593641 TTLL13PA6NNM8 815 aa24.99■■□□□ 1.59
SSBP4-203ENST00000593641 ACKR2O00590 384 aa24.99■■□□□ 1.59
SSBP4-203ENST00000593641 PTGESO14684 152 aa24.99■■□□□ 1.59
SSBP4-203ENST00000593641 SRFP11831 508 aa24.99■■□□□ 1.59
SSBP4-203ENST00000593641 ELAVL2Q12926 359 aaKnown RBP24.99■■□□□ 1.59
SSBP4-203ENST00000593641 ZNF174Q15697 407 aa24.99■■□□□ 1.59
SSBP4-203ENST00000593641 PSMD5Q16401 504 aa24.99■■□□□ 1.59
SSBP4-203ENST00000593641 NOSTRINQ8IVI9 506 aa24.99■■□□□ 1.59
SSBP4-203ENST00000593641 SLC44A3Q8N4M1 653 aa24.99■■□□□ 1.59
SSBP4-203ENST00000593641 PIK3R5Q8WYR1 880 aa24.99■■□□□ 1.59
SSBP4-203ENST00000593641 NKD2Q969F2 451 aaPredicted RBP24.99■■□□□ 1.59
SSBP4-203ENST00000593641 PPP4R2Q9NY27 417 aa24.99■■□□□ 1.59
SSBP4-203ENST00000593641 FBXW11Q9UKB1 542 aa24.99■■□□□ 1.59
SSBP4-203ENST00000593641 LAMP2P13473 410 aa24.98■■□□□ 1.59
SSBP4-203ENST00000593641 MUTP22033 750 aa24.98■■□□□ 1.59
SSBP4-203ENST00000593641 GNL2Q13823 731 aaKnown RBP24.98■■□□□ 1.59
SSBP4-203ENST00000593641 DCAF4L1Q3SXM0 396 aa24.98■■□□□ 1.59
SSBP4-203ENST00000593641 PDXDC1Q6P996 788 aa24.98■■□□□ 1.59
SSBP4-203ENST00000593641 FRMD5Q7Z6J6 570 aa24.98■■□□□ 1.59
SSBP4-203ENST00000593641 IFT74Q96LB3 600 aa24.98■■□□□ 1.59
SSBP4-203ENST00000593641 CCDC113Q9H0I3 377 aa24.98■■□□□ 1.59
SSBP4-203ENST00000593641 FOXP1Q9H334 677 aaPredicted RBP24.98■■□□□ 1.59
SSBP4-203ENST00000593641 CA14Q9ULX7 337 aa24.98■■□□□ 1.59
SSBP4-203ENST00000593641 MYH15Q9Y2K3 1946 aa24.97■■□□□ 1.59
SSBP4-203ENST00000593641 ANGPT1Q15389 498 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms