RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 TRPS1Q9UHF7 1281 aa7.8□□□□□ -1.16
VMP1-215ENST00000592619 ABCA10Q8WWZ4 1543 aa7.79□□□□□ -1.16
VMP1-215ENST00000592619 ZNF608Q9ULD9 1512 aaPredicted RBP7.79□□□□□ -1.16
VMP1-215ENST00000592619 CREB3O43889 395 aa7.79□□□□□ -1.16
VMP1-215ENST00000592619 MYF5P13349 255 aa7.79□□□□□ -1.16
VMP1-215ENST00000592619 PTMSP20962 102 aa7.79□□□□□ -1.16
VMP1-215ENST00000592619 RPL13P26373 211 aaKnown RBP7.79□□□□□ -1.16
VMP1-215ENST00000592619 CRHR1P34998 444 aa7.79□□□□□ -1.16
VMP1-215ENST00000592619 SREBF1P36956 1147 aa7.79□□□□□ -1.16
VMP1-215ENST00000592619 LIMS1P48059 325 aa7.79□□□□□ -1.16
VMP1-215ENST00000592619 TARDBPQ13148 414 aaKnown RBP eCLIP7.79□□□□□ -1.16
VMP1-215ENST00000592619 ZNF827Q17R98 1081 aa7.79□□□□□ -1.16
VMP1-215ENST00000592619 KHDC1Q4VXA5 237 aaKnown RBP7.79□□□□□ -1.16
VMP1-215ENST00000592619 APOA5Q6Q788 366 aa7.79□□□□□ -1.16
VMP1-215ENST00000592619 REXO1L1PQ8IX06 675 aa7.79□□□□□ -1.16
VMP1-215ENST00000592619 BTBD1Q9H0C5 482 aa7.79□□□□□ -1.16
VMP1-215ENST00000592619 ATP6V0A4Q9HBG4 840 aa7.79□□□□□ -1.16
VMP1-215ENST00000592619 LMBRD1Q9NUN5 540 aa7.79□□□□□ -1.16
VMP1-215ENST00000592619 SPATA6Q9NWH7 488 aaPredicted RBP7.79□□□□□ -1.16
VMP1-215ENST00000592619 RTEL1Q9NZ71 1219 aa7.79□□□□□ -1.16
VMP1-215ENST00000592619 PMF1-BGLAPU3KQ54 211 aa7.79□□□□□ -1.16
VMP1-215ENST00000592619 RAD54L2Q9Y4B4 1467 aa7.79□□□□□ -1.16
VMP1-215ENST00000592619 ALDH1A2O94788 518 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 PLA2G1BP04054 148 aaKnown RBP7.78□□□□□ -1.16
VMP1-215ENST00000592619 SETSIPP0DME0 302 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 TYRP14679 529 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 ZEB1P37275 1124 aaPredicted RBP7.78□□□□□ -1.16
VMP1-215ENST00000592619 MEOX1P50221 254 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 PER3P56645 1201 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 DLG4P78352 724 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 TLE1Q04724 770 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 KRT72Q14CN4 511 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 HSP90AB4PQ58FF6 505 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 FAM83BQ5T0W9 1011 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 MCTP1Q6DN14 999 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 HEATR3Q7Z4Q2 680 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 DPP9Q86TI2 863 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 RSPH3Q86UC2 560 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 TMEFF1Q8IYR6 380 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 RTKN2Q8IZC4 609 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 PQLC1Q8N2U9 271 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 PLA2G15Q8NCC3 412 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 NUDT10Q8NFP7 164 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 IFI44Q8TCB0 444 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 FNIP1Q8TF40 1166 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 ANKS1AQ92625 1134 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 PHKBQ93100 1093 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 NUDT11Q96G61 164 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 SLC35A4Q96G79 324 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 APIPQ96GX9 242 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 AJUBAQ96IF1 538 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 CCDC138Q96M89 665 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 TBCBQ99426 244 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 PDCD2LQ9BRP1 358 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 LRRC27Q9C0I9 530 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 C14orf93Q9H972 538 aaKnown RBP7.78□□□□□ -1.16
VMP1-215ENST00000592619 RSAD1Q9HA92 442 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 TLR9Q9NR96 1032 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 GPRC5DQ9NZD1 345 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 TPCN1Q9ULQ1 816 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 DMTF1Q9Y222 760 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 CTDP1Q9Y5B0 961 aaPredicted RBP7.78□□□□□ -1.16
VMP1-215ENST00000592619 ABCA5Q8WWZ7 1642 aa7.78□□□□□ -1.16
VMP1-215ENST00000592619 A0A0U1RQG5 324 aaPredicted RBP7.77□□□□□ -1.17
VMP1-215ENST00000592619 LRRC14BA6NHZ5 514 aa7.77□□□□□ -1.17
VMP1-215ENST00000592619 PHGDHO43175 533 aaKnown RBP7.77□□□□□ -1.17
VMP1-215ENST00000592619 MTSS1O43312 755 aa7.77□□□□□ -1.17
VMP1-215ENST00000592619 AMY1AP04745 511 aa7.77□□□□□ -1.17
VMP1-215ENST00000592619 FTH1P19P0C7X4 201 aa7.77□□□□□ -1.17
VMP1-215ENST00000592619 KIR2DL3P43628 341 aa7.77□□□□□ -1.17
VMP1-215ENST00000592619 ATP8B2P98198 1209 aa7.77□□□□□ -1.17
VMP1-215ENST00000592619 CAP1Q01518 475 aa7.77□□□□□ -1.17
VMP1-215ENST00000592619 ZRSR2Q15696 482 aaKnown RBP7.77□□□□□ -1.17
VMP1-215ENST00000592619 GRAMD1BQ3KR37 738 aa7.77□□□□□ -1.17
VMP1-215ENST00000592619 Q6ZUG5 572 aa7.77□□□□□ -1.17
VMP1-215ENST00000592619 LARP4Q71RC2 724 aaKnown RBP eCLIP7.77□□□□□ -1.17
VMP1-215ENST00000592619 LILRA3Q8N6C8 439 aaPredicted RBP7.77□□□□□ -1.17
VMP1-215ENST00000592619 FBXO15Q8NCQ5 510 aaPredicted RBP7.77□□□□□ -1.17
VMP1-215ENST00000592619 ACRBPQ8NEB7 543 aa7.77□□□□□ -1.17
VMP1-215ENST00000592619 SIGLEC10Q96LC7 697 aa7.77□□□□□ -1.17
VMP1-215ENST00000592619 SGCZQ96LD1 299 aa7.77□□□□□ -1.17
VMP1-215ENST00000592619 APOL5Q9BWW9 433 aa7.77□□□□□ -1.17
VMP1-215ENST00000592619 L2HGDHQ9H9P8 463 aa7.77□□□□□ -1.17
VMP1-215ENST00000592619 KCNK12Q9HB15 430 aa7.77□□□□□ -1.17
VMP1-215ENST00000592619 LANCL2Q9NS86 450 aa7.77□□□□□ -1.17
VMP1-215ENST00000592619 PNPOQ9NVS9 261 aa7.77□□□□□ -1.17
VMP1-215ENST00000592619 PCDHA3Q9Y5H8 950 aa7.77□□□□□ -1.17
VMP1-215ENST00000592619 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.77□□□□□ -1.17
VMP1-215ENST00000592619 MYBBP1AQ9BQG0 1328 aaKnown RBP7.77□□□□□ -1.17
VMP1-215ENST00000592619 PBRM1Q86U86 1689 aa7.76□□□□□ -1.17
VMP1-215ENST00000592619 ABHD14A-ACY1A0A1B0GW23 586 aa7.76□□□□□ -1.17
VMP1-215ENST00000592619 C2orf78A6NCI8 922 aa7.76□□□□□ -1.17
VMP1-215ENST00000592619 RASA4BC9J798 803 aa7.76□□□□□ -1.17
VMP1-215ENST00000592619 H3BUI4 141 aa7.76□□□□□ -1.17
VMP1-215ENST00000592619 FOXN3O00409 490 aaPredicted RBP7.76□□□□□ -1.17
VMP1-215ENST00000592619 RASA4O43374 803 aa7.76□□□□□ -1.17
VMP1-215ENST00000592619 SYN1P17600 705 aa7.76□□□□□ -1.17
VMP1-215ENST00000592619 MALP21145 153 aa7.76□□□□□ -1.17
VMP1-215ENST00000592619 GUCY1A2P33402 732 aa7.76□□□□□ -1.17
VMP1-215ENST00000592619 PIK3CBP42338 1070 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms