RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 MREGQ8N565 214 aa16.97■□□□□ 0.31
MBD1-227ENST00000592060 EIF1ADQ8N9N8 165 aaKnown RBP16.97■□□□□ 0.31
MBD1-227ENST00000592060 DCPSQ96C86 337 aaKnown RBP16.97■□□□□ 0.31
MBD1-227ENST00000592060 SH3GL2Q99962 352 aa16.97■□□□□ 0.31
MBD1-227ENST00000592060 HAPLN2Q9GZV7 340 aa16.97■□□□□ 0.31
MBD1-227ENST00000592060 CARD9Q9H257 536 aa16.97■□□□□ 0.31
MBD1-227ENST00000592060 ELP3Q9H9T3 547 aa16.97■□□□□ 0.31
MBD1-227ENST00000592060 FAM153AQ9UHL3 310 aa16.97■□□□□ 0.31
MBD1-227ENST00000592060 ZHX1Q9UKY1 873 aaPredicted RBP16.97■□□□□ 0.31
MBD1-227ENST00000592060 KRIT1O00522 736 aa16.96■□□□□ 0.31
MBD1-227ENST00000592060 KIAA0391O15091 583 aaKnown RBP16.96■□□□□ 0.31
MBD1-227ENST00000592060 YY1P25490 414 aa16.96■□□□□ 0.31
MBD1-227ENST00000592060 RFC5P40937 340 aa16.96■□□□□ 0.31
MBD1-227ENST00000592060 CDR2Q01850 454 aa16.96■□□□□ 0.31
MBD1-227ENST00000592060 GCNT1Q02742 428 aa16.96■□□□□ 0.31
MBD1-227ENST00000592060 TRADDQ15628 312 aa16.96■□□□□ 0.31
MBD1-227ENST00000592060 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.96■□□□□ 0.31
MBD1-227ENST00000592060 NCAPG2Q86XI2 1143 aa16.96■□□□□ 0.31
MBD1-227ENST00000592060 SULF1Q8IWU6 871 aa16.96■□□□□ 0.31
MBD1-227ENST00000592060 AFAP1L1Q8TED9 768 aa16.96■□□□□ 0.31
MBD1-227ENST00000592060 DHX38Q92620 1227 aaKnown RBP16.96■□□□□ 0.31
MBD1-227ENST00000592060 ELMO3Q96BJ8 720 aa16.96■□□□□ 0.31
MBD1-227ENST00000592060 FAM84AQ96KN4 292 aa16.96■□□□□ 0.31
MBD1-227ENST00000592060 SLITRK6Q9H5Y7 841 aa16.96■□□□□ 0.31
MBD1-227ENST00000592060 CTTNBP2NLQ9P2B4 639 aa16.96■□□□□ 0.31
MBD1-227ENST00000592060 SART1O43290 800 aaKnown RBP16.95■□□□□ 0.3
MBD1-227ENST00000592060 ECHS1P30084 290 aa16.95■□□□□ 0.3
MBD1-227ENST00000592060 IREB2P48200 963 aaKnown RBP16.95■□□□□ 0.3
MBD1-227ENST00000592060 PDE6CP51160 858 aa16.95■□□□□ 0.3
MBD1-227ENST00000592060 NLRP11P59045 1033 aaKnown RBP16.95■□□□□ 0.3
MBD1-227ENST00000592060 STRN3Q13033 797 aa16.95■□□□□ 0.3
MBD1-227ENST00000592060 CRELD2Q6UXH1 353 aaPredicted RBP16.95■□□□□ 0.3
MBD1-227ENST00000592060 ENOSF1Q7L5Y1 443 aa16.95■□□□□ 0.3
MBD1-227ENST00000592060 IFT81Q8WYA0 676 aa16.95■□□□□ 0.3
MBD1-227ENST00000592060 ALG3Q92685 438 aa16.95■□□□□ 0.3
MBD1-227ENST00000592060 DDX47Q9H0S4 455 aaKnown RBP16.95■□□□□ 0.3
MBD1-227ENST00000592060 R3HDMLQ9H3Y0 253 aa16.95■□□□□ 0.3
MBD1-227ENST00000592060 FAM204AQ9H8W3 233 aa16.95■□□□□ 0.3
MBD1-227ENST00000592060 ALG6Q9Y672 507 aa16.95■□□□□ 0.3
MBD1-227ENST00000592060 LRRIQ4A6NIV6 560 aa16.95■□□□□ 0.3
MBD1-227ENST00000592060 CYP1A2P05177 515 aa16.95■□□□□ 0.3
MBD1-227ENST00000592060 EDN1P05305 212 aa16.95■□□□□ 0.3
MBD1-227ENST00000592060 IRX3P78415 501 aaPredicted RBP16.95■□□□□ 0.3
MBD1-227ENST00000592060 NEDD9Q14511 834 aa16.95■□□□□ 0.3
MBD1-227ENST00000592060 ZACNQ401N2 412 aa16.95■□□□□ 0.3
MBD1-227ENST00000592060 ALS2CLQ60I27 953 aa16.95■□□□□ 0.3
MBD1-227ENST00000592060 DEPTORQ8TB45 409 aa16.95■□□□□ 0.3
MBD1-227ENST00000592060 WHAMMQ8TF30 809 aa16.95■□□□□ 0.3
MBD1-227ENST00000592060 SLC7A3Q8WY07 619 aa16.95■□□□□ 0.3
MBD1-227ENST00000592060 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.95■□□□□ 0.3
MBD1-227ENST00000592060 OTUD5Q96G74 571 aa16.95■□□□□ 0.3
MBD1-227ENST00000592060 CLMNQ96JQ2 1002 aa16.95■□□□□ 0.3
MBD1-227ENST00000592060 RNPC3Q96LT9 517 aaKnown RBP16.95■□□□□ 0.3
MBD1-227ENST00000592060 FGD4Q96M96 766 aa16.95■□□□□ 0.3
MBD1-227ENST00000592060 PI4K2AQ9BTU6 479 aa16.95■□□□□ 0.3
MBD1-227ENST00000592060 ASCC2Q9H1I8 757 aaPredicted RBP16.95■□□□□ 0.3
MBD1-227ENST00000592060 TAF1DQ9H5J8 278 aaPredicted RBP16.95■□□□□ 0.3
MBD1-227ENST00000592060 AGO2Q9UKV8 859 aaKnown RBP16.95■□□□□ 0.3
MBD1-227ENST00000592060 PTPRJQ12913 1337 aa16.94■□□□□ 0.3
MBD1-227ENST00000592060 GRIN3BO60391 1043 aa16.94■□□□□ 0.3
MBD1-227ENST00000592060 FGGP02679 453 aa16.94■□□□□ 0.3
MBD1-227ENST00000592060 C4BPAP04003 597 aaKnown RBP16.94■□□□□ 0.3
MBD1-227ENST00000592060 POU5F1Q01860 360 aaKnown RBP16.94■□□□□ 0.3
MBD1-227ENST00000592060 ERO1BQ86YB8 467 aa16.94■□□□□ 0.3
MBD1-227ENST00000592060 PAGR1Q9BTK6 254 aa16.94■□□□□ 0.3
MBD1-227ENST00000592060 TMEM134Q9H6X4 195 aa16.94■□□□□ 0.3
MBD1-227ENST00000592060 GTF3C4Q9UKN8 822 aa16.94■□□□□ 0.3
MBD1-227ENST00000592060 UTRNP46939 3433 aa16.94■□□□□ 0.3
MBD1-227ENST00000592060 ERICH4A6NGS2 130 aa16.93■□□□□ 0.3
MBD1-227ENST00000592060 SPDYE5A6NIY4 337 aa16.93■□□□□ 0.3
MBD1-227ENST00000592060 MIF4GDA9UHW6 222 aaKnown RBP16.93■□□□□ 0.3
MBD1-227ENST00000592060 TULP1O00294 542 aaPredicted RBP16.93■□□□□ 0.3
MBD1-227ENST00000592060 CXCL11O14625 94 aa16.93■□□□□ 0.3
MBD1-227ENST00000592060 ATMINO43313 823 aaPredicted RBP16.93■□□□□ 0.3
MBD1-227ENST00000592060 TGFB3P10600 412 aa16.93■□□□□ 0.3
MBD1-227ENST00000592060 LMAN1P49257 510 aa16.93■□□□□ 0.3
MBD1-227ENST00000592060 CUL1Q13616 776 aa16.93■□□□□ 0.3
MBD1-227ENST00000592060 CAPSQ13938 189 aa16.93■□□□□ 0.3
MBD1-227ENST00000592060 TDRD10Q5VZ19 366 aaKnown RBP16.93■□□□□ 0.3
MBD1-227ENST00000592060 FAM160B1Q5W0V3 765 aa16.93■□□□□ 0.3
MBD1-227ENST00000592060 LMBRD2Q68DH5 695 aaPredicted RBP16.93■□□□□ 0.3
MBD1-227ENST00000592060 METTL7BQ6UX53 244 aa16.93■□□□□ 0.3
MBD1-227ENST00000592060 ZBTB45Q96K62 511 aaPredicted RBP16.93■□□□□ 0.3
MBD1-227ENST00000592060 FAM81BQ96LP2 452 aa16.93■□□□□ 0.3
MBD1-227ENST00000592060 RPS6KC1Q96S38 1066 aa16.93■□□□□ 0.3
MBD1-227ENST00000592060 C1orf112Q9NSG2 853 aa16.93■□□□□ 0.3
MBD1-227ENST00000592060 NRBP2Q9NSY0 501 aa16.93■□□□□ 0.3
MBD1-227ENST00000592060 KCNH4Q9UQ05 1017 aa16.93■□□□□ 0.3
MBD1-227ENST00000592060 ADGRA2Q96PE1 1338 aa16.93■□□□□ 0.3
MBD1-227ENST00000592060 K7ERI5 159 aa16.93■□□□□ 0.3
MBD1-227ENST00000592060 VNN1O95497 513 aa16.93■□□□□ 0.3
MBD1-227ENST00000592060 GGPS1O95749 300 aa16.93■□□□□ 0.3
MBD1-227ENST00000592060 HLA-DRAP01903 254 aa16.93■□□□□ 0.3
MBD1-227ENST00000592060 ACOT2P49753 483 aa16.93■□□□□ 0.3
MBD1-227ENST00000592060 STAT5BP51692 787 aa16.93■□□□□ 0.3
MBD1-227ENST00000592060 MOGSQ13724 837 aa16.93■□□□□ 0.3
MBD1-227ENST00000592060 CLEC16AQ2KHT3 1053 aa16.93■□□□□ 0.3
MBD1-227ENST00000592060 SLFN12LQ6IEE8 588 aa16.93■□□□□ 0.3
MBD1-227ENST00000592060 CD101Q93033 1021 aa16.93■□□□□ 0.3
MBD1-227ENST00000592060 ZSWIM1Q9BR11 485 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms