RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 PLXNA4Q9HCM2 1894 aa15.31■□□□□ 0.04
CLIP3-205ENST00000592017 A0A087X0B3 334 aa15.3■□□□□ 0.04
CLIP3-205ENST00000592017 FSD2A1L4K1 749 aa15.3■□□□□ 0.04
CLIP3-205ENST00000592017 CARNS1A5YM72 827 aa15.3■□□□□ 0.04
CLIP3-205ENST00000592017 FAM86C2PA6NEL3 165 aa15.3■□□□□ 0.04
CLIP3-205ENST00000592017 NRP1O14786 923 aa15.3■□□□□ 0.04
CLIP3-205ENST00000592017 CTSAP10619 480 aa15.3■□□□□ 0.04
CLIP3-205ENST00000592017 DDIT3P35638 169 aa15.3■□□□□ 0.04
CLIP3-205ENST00000592017 ME1P48163 572 aa15.3■□□□□ 0.04
CLIP3-205ENST00000592017 SCNN1GP51170 649 aa15.3■□□□□ 0.04
CLIP3-205ENST00000592017 SMTNP53814 917 aa15.3■□□□□ 0.04
CLIP3-205ENST00000592017 STRN3Q13033 797 aa15.3■□□□□ 0.04
CLIP3-205ENST00000592017 NT5DC1Q5TFE4 455 aa15.3■□□□□ 0.04
CLIP3-205ENST00000592017 CCDC73Q6ZRK6 1079 aa15.3■□□□□ 0.04
CLIP3-205ENST00000592017 COLGALT2Q8IYK4 626 aa15.3■□□□□ 0.04
CLIP3-205ENST00000592017 MYCT1Q8N699 235 aa15.3■□□□□ 0.04
CLIP3-205ENST00000592017 GSTCDQ8NEC7 633 aa15.3■□□□□ 0.04
CLIP3-205ENST00000592017 KCNG4Q8TDN1 519 aa15.3■□□□□ 0.04
CLIP3-205ENST00000592017 TMEM175Q9BSA9 504 aa15.3■□□□□ 0.04
CLIP3-205ENST00000592017 APOL5Q9BWW9 433 aa15.3■□□□□ 0.04
CLIP3-205ENST00000592017 MRPL4Q9BYD3 311 aaKnown RBP15.3■□□□□ 0.04
CLIP3-205ENST00000592017 TMEM134Q9H6X4 195 aa15.3■□□□□ 0.04
CLIP3-205ENST00000592017 KLK14Q9P0G3 267 aa15.3■□□□□ 0.04
CLIP3-205ENST00000592017 LARSQ9P2J5 1176 aaKnown RBP15.3■□□□□ 0.04
CLIP3-205ENST00000592017 FAN1Q9Y2M0 1017 aa15.3■□□□□ 0.04
CLIP3-205ENST00000592017 RBM19Q9Y4C8 960 aaKnown RBP15.3■□□□□ 0.04
CLIP3-205ENST00000592017 HCFC2Q9Y5Z7 792 aa15.3■□□□□ 0.04
CLIP3-205ENST00000592017 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.29■□□□□ 0.04
CLIP3-205ENST00000592017 K7ENM7 598 aa15.29■□□□□ 0.04
CLIP3-205ENST00000592017 GPR37L1O60883 481 aa15.29■□□□□ 0.04
CLIP3-205ENST00000592017 CUTAO60888 179 aa15.29■□□□□ 0.04
CLIP3-205ENST00000592017 HARSP12081 509 aaKnown RBP15.29■□□□□ 0.04
CLIP3-205ENST00000592017 DSC1Q08554 894 aa15.29■□□□□ 0.04
CLIP3-205ENST00000592017 GIT2Q14161 759 aa15.29■□□□□ 0.04
CLIP3-205ENST00000592017 TMEM31Q5JXX7 168 aa15.29■□□□□ 0.04
CLIP3-205ENST00000592017 DYMQ7RTS9 669 aa15.29■□□□□ 0.04
CLIP3-205ENST00000592017 TAS1R3Q7RTX0 852 aa15.29■□□□□ 0.04
CLIP3-205ENST00000592017 TMEM161BQ8NDZ6 487 aa15.29■□□□□ 0.04
CLIP3-205ENST00000592017 SPIRE2Q8WWL2 714 aa15.29■□□□□ 0.04
CLIP3-205ENST00000592017 CHAMP1Q96JM3 812 aa15.29■□□□□ 0.04
CLIP3-205ENST00000592017 RPS6KC1Q96S38 1066 aa15.29■□□□□ 0.04
CLIP3-205ENST00000592017 POP1Q99575 1024 aaKnown RBP15.29■□□□□ 0.04
CLIP3-205ENST00000592017 TARS2Q9BW92 718 aaKnown RBP15.29■□□□□ 0.04
CLIP3-205ENST00000592017 PARVGQ9HBI0 331 aa15.29■□□□□ 0.04
CLIP3-205ENST00000592017 MARCH5Q9NX47 278 aa15.29■□□□□ 0.04
CLIP3-205ENST00000592017 SNTG2Q9NY99 539 aa15.29■□□□□ 0.04
CLIP3-205ENST00000592017 CDH22Q9UJ99 828 aa15.29■□□□□ 0.04
CLIP3-205ENST00000592017 CFAP45Q9UL16 551 aa15.29■□□□□ 0.04
CLIP3-205ENST00000592017 GIT1Q9Y2X7 761 aa15.29■□□□□ 0.04
CLIP3-205ENST00000592017 PRG3Q9Y2Y8 225 aaPredicted RBP15.29■□□□□ 0.04
CLIP3-205ENST00000592017 ZDHHC9Q9Y397 364 aa15.29■□□□□ 0.04
CLIP3-205ENST00000592017 IRAK3Q9Y616 596 aa15.29■□□□□ 0.04
CLIP3-205ENST00000592017 MYH15Q9Y2K3 1946 aa15.28■□□□□ 0.04
CLIP3-205ENST00000592017 LOC730098B7Z3J9 87 aa15.28■□□□□ 0.04
CLIP3-205ENST00000592017 F8W810 466 aa15.28■□□□□ 0.04
CLIP3-205ENST00000592017 DCXO43602 365 aa15.28■□□□□ 0.04
CLIP3-205ENST00000592017 LILRB3O75022 631 aa15.28■□□□□ 0.04
CLIP3-205ENST00000592017 EFEMP2O95967 443 aa15.28■□□□□ 0.04
CLIP3-205ENST00000592017 ALADP13716 330 aa15.28■□□□□ 0.04
CLIP3-205ENST00000592017 HOXB8P17481 243 aaPredicted RBP15.28■□□□□ 0.04
CLIP3-205ENST00000592017 CA8P35219 290 aa15.28■□□□□ 0.04
CLIP3-205ENST00000592017 BMS1Q14692 1282 aaKnown RBP15.28■□□□□ 0.04
CLIP3-205ENST00000592017 PTPN14Q15678 1187 aa15.28■□□□□ 0.04
CLIP3-205ENST00000592017 DCAF4L1Q3SXM0 396 aa15.28■□□□□ 0.04
CLIP3-205ENST00000592017 ZNF568Q3ZCX4 644 aa15.28■□□□□ 0.04
CLIP3-205ENST00000592017 ATL3Q6DD88 541 aa15.28■□□□□ 0.04
CLIP3-205ENST00000592017 SV2BQ7L1I2 683 aa15.28■□□□□ 0.04
CLIP3-205ENST00000592017 TAS1R1Q7RTX1 841 aa15.28■□□□□ 0.04
CLIP3-205ENST00000592017 APBB1IPQ7Z5R6 666 aaPredicted RBP15.28■□□□□ 0.04
CLIP3-205ENST00000592017 ZBTB33Q86T24 672 aa15.28■□□□□ 0.04
CLIP3-205ENST00000592017 RNF135Q8IUD6 432 aa15.28■□□□□ 0.04
CLIP3-205ENST00000592017 SLC22A17Q8WUG5 538 aa15.28■□□□□ 0.04
CLIP3-205ENST00000592017 CASP10Q92851 521 aa15.28■□□□□ 0.04
CLIP3-205ENST00000592017 BICD1Q96G01 975 aa15.28■□□□□ 0.04
CLIP3-205ENST00000592017 PHF7Q9BWX1 381 aaPredicted RBP15.28■□□□□ 0.04
CLIP3-205ENST00000592017 ANKFY1Q9P2R3 1169 aa15.28■□□□□ 0.04
CLIP3-205ENST00000592017 KCNG1Q9UIX4 513 aa15.28■□□□□ 0.04
CLIP3-205ENST00000592017 GDAQ9Y2T3 454 aa15.28■□□□□ 0.04
CLIP3-205ENST00000592017 MYMKA6NI61 221 aa15.27■□□□□ 0.04
CLIP3-205ENST00000592017 H0YCG3 227 aa15.27■□□□□ 0.04
CLIP3-205ENST00000592017 RECQL4O94761 1208 aa15.27■□□□□ 0.04
CLIP3-205ENST00000592017 SRGAP2BP0DMP2 458 aa15.27■□□□□ 0.04
CLIP3-205ENST00000592017 MAPTP10636 758 aaKnown RBP15.27■□□□□ 0.04
CLIP3-205ENST00000592017 EPCAMP16422 314 aa15.27■□□□□ 0.04
CLIP3-205ENST00000592017 OR1G1P47890 313 aa15.27■□□□□ 0.04
CLIP3-205ENST00000592017 NCKAP1LP55160 1127 aa15.27■□□□□ 0.04
CLIP3-205ENST00000592017 KRT85P78386 507 aa15.27■□□□□ 0.04
CLIP3-205ENST00000592017 KANK3Q6NY19 840 aa15.27■□□□□ 0.04
CLIP3-205ENST00000592017 SHC4Q6S5L8 630 aa15.27■□□□□ 0.04
CLIP3-205ENST00000592017 C12orf76Q8N812 135 aaPredicted RBP15.27■□□□□ 0.04
CLIP3-205ENST00000592017 DDX12PQ92771 950 aa15.27■□□□□ 0.04
CLIP3-205ENST00000592017 DHX58Q96C10 678 aa15.27■□□□□ 0.04
CLIP3-205ENST00000592017 ACO2Q99798 780 aaKnown RBP15.27■□□□□ 0.04
CLIP3-205ENST00000592017 TCHPQ9BT92 498 aa15.27■□□□□ 0.04
CLIP3-205ENST00000592017 CDT1Q9H211 546 aa15.27■□□□□ 0.04
CLIP3-205ENST00000592017 CXCL16Q9H2A7 254 aa15.27■□□□□ 0.04
CLIP3-205ENST00000592017 MUTYHQ9UIF7 546 aa15.27■□□□□ 0.04
CLIP3-205ENST00000592017 PCDHA7Q9UN72 937 aa15.27■□□□□ 0.04
CLIP3-205ENST00000592017 TNFSF13BQ9Y275 285 aa15.27■□□□□ 0.04
CLIP3-205ENST00000592017 TRAK2O60296 914 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms